RNA–Protein interactions for RNA: ENST00000463370.5

VAPB-203, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 2,393 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-203ENST00000463370 C1QTNF4Q9BXJ3 329 aa9.16□□□□□ -0.94
VAPB-203ENST00000463370 ZMAT5Q9UDW3 170 aaKnown RBP9.16□□□□□ -0.94
VAPB-203ENST00000463370 C11orf86A6NJI1 115 aa9.16□□□□□ -0.94
VAPB-203ENST00000463370 C16orf74Q96GX8 76 aa9.16□□□□□ -0.94
VAPB-203ENST00000463370 GAGE12BA1L429 117 aa9.15□□□□□ -0.94
VAPB-203ENST00000463370 DLEU1O43261 78 aa9.15□□□□□ -0.94
VAPB-203ENST00000463370 GAGE7O76087 117 aa9.15□□□□□ -0.94
VAPB-203ENST00000463370 GAGE12FP0CL80 117 aa9.15□□□□□ -0.94
VAPB-203ENST00000463370 GAGE12GP0CL81 117 aa9.15□□□□□ -0.94
VAPB-203ENST00000463370 GAGE12IP0CL82 117 aa9.15□□□□□ -0.94
VAPB-203ENST00000463370 INSL3P51460 131 aa9.15□□□□□ -0.94
VAPB-203ENST00000463370 RRN3P1Q2M238 152 aa9.15□□□□□ -0.94
VAPB-203ENST00000463370 TRAV8-6A0A0B4J262 113 aa9.15□□□□□ -0.95
VAPB-203ENST00000463370 ZNRF2Q8NHG8 242 aa9.15□□□□□ -0.95
VAPB-203ENST00000463370 CHCHD7Q9BUK0 85 aa9.15□□□□□ -0.95
VAPB-203ENST00000463370 TRAV4A0A0B4J268 109 aa9.14□□□□□ -0.95
VAPB-203ENST00000463370 IGLV4-3A0A075B6K6 122 aa9.14□□□□□ -0.95
VAPB-203ENST00000463370 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.14□□□□□ -0.95
VAPB-203ENST00000463370 IGKV2-29A2NJV5 120 aaPredicted RBP9.14□□□□□ -0.95
VAPB-203ENST00000463370 LINC01549A6NIU2 74 aa9.14□□□□□ -0.95
VAPB-203ENST00000463370 SLC25A29Q8N8R3 303 aa9.14□□□□□ -0.95
VAPB-203ENST00000463370 RNASE13Q5GAN3 156 aaKnown RBP9.13□□□□□ -0.95
VAPB-203ENST00000463370 C12orf54Q6X4T0 127 aa9.13□□□□□ -0.95
VAPB-203ENST00000463370 DNAJC30Q96LL9 226 aa9.13□□□□□ -0.95
VAPB-203ENST00000463370 OVOL2Q9BRP0 275 aa9.13□□□□□ -0.95
VAPB-203ENST00000463370 ANK2Q01484 3957 aa9.12□□□□□ -0.95
VAPB-203ENST00000463370 TRBV25-1A0A075B6N4 114 aa9.12□□□□□ -0.95
VAPB-203ENST00000463370 TRGV2A0A075B6R0 118 aa9.12□□□□□ -0.95
VAPB-203ENST00000463370 K7EQD1 137 aa9.12□□□□□ -0.95
VAPB-203ENST00000463370 ZNF25P17030 456 aaPredicted RBP9.12□□□□□ -0.95
VAPB-203ENST00000463370 TMEM97Q5BJF2 176 aa9.12□□□□□ -0.95
VAPB-203ENST00000463370 SIVA1O15304 175 aa9.12□□□□□ -0.95
VAPB-203ENST00000463370 KRTAP24-1Q3LI83 254 aa9.12□□□□□ -0.95
VAPB-203ENST00000463370 CMYA5Q8N3K9 4069 aa9.11□□□□□ -0.95
VAPB-203ENST00000463370 TRBV7-3A0A075B6L6 115 aa9.11□□□□□ -0.95
VAPB-203ENST00000463370 LOC100131303A0A0U1RQF7 123 aa9.11□□□□□ -0.95
VAPB-203ENST00000463370 LCE2DQ5TA82 110 aaPredicted RBP9.11□□□□□ -0.95
VAPB-203ENST00000463370 PRADC1Q9BSG0 188 aa9.11□□□□□ -0.95
VAPB-203ENST00000463370 X6R8D5 127 aa9.11□□□□□ -0.95
VAPB-203ENST00000463370 E9PLD3 99 aa9.1□□□□□ -0.95
VAPB-203ENST00000463370 WFDC9Q8NEX5 89 aa9.1□□□□□ -0.95
VAPB-203ENST00000463370 UBE2D4Q9Y2X8 147 aa9.1□□□□□ -0.95
VAPB-203ENST00000463370 BAHCC1Q9P281 2608 aa9.1□□□□□ -0.95
VAPB-203ENST00000463370 GAGE12JA6NER3 117 aa9.1□□□□□ -0.95
VAPB-203ENST00000463370 K7EP13 123 aa9.1□□□□□ -0.95
VAPB-203ENST00000463370 GAGE1Q13065 139 aa9.1□□□□□ -0.95
VAPB-203ENST00000463370 GAGE4Q13068 117 aa9.1□□□□□ -0.95
VAPB-203ENST00000463370 GAGE5Q13069 117 aa9.1□□□□□ -0.95
VAPB-203ENST00000463370 COTL1Q14019 142 aa9.1□□□□□ -0.95
VAPB-203ENST00000463370 GAGE13Q4V321 117 aa9.1□□□□□ -0.95
VAPB-203ENST00000463370 OR11H2Q8NH07 326 aa9.09□□□□□ -0.95
VAPB-203ENST00000463370 CHAC1Q9BUX1 264 aa9.09□□□□□ -0.95
VAPB-203ENST00000463370 PYGO1Q9Y3Y4 419 aa9.09□□□□□ -0.95
VAPB-203ENST00000463370 PKD1L1Q8TDX9 2849 aa9.09□□□□□ -0.95
VAPB-203ENST00000463370 A0A0J9YXV3 536 aa9.09□□□□□ -0.95
VAPB-203ENST00000463370 TAX1BP3O14907 124 aa9.09□□□□□ -0.95
VAPB-203ENST00000463370 TMEM170BQ5T4T1 132 aa9.09□□□□□ -0.95
VAPB-203ENST00000463370 NTM-AS1Q6ZSK4 140 aa9.09□□□□□ -0.95
VAPB-203ENST00000463370 VCX2Q9H322 139 aa9.09□□□□□ -0.95
VAPB-203ENST00000463370 STAB1Q9NY15 2570 aa9.09□□□□□ -0.95
VAPB-203ENST00000463370 DEFB130BP0DP73 79 aa9.08□□□□□ -0.96
VAPB-203ENST00000463370 DEFB130AP0DP74 79 aa9.08□□□□□ -0.96
VAPB-203ENST00000463370 TSPEAR-AS2P59090 65 aa9.08□□□□□ -0.96
VAPB-203ENST00000463370 HSD52Q0P140 79 aa9.08□□□□□ -0.96
VAPB-203ENST00000463370 AMELXQ99217 191 aa9.08□□□□□ -0.96
VAPB-203ENST00000463370 TRBV10-1A0A0K0K1A3 114 aa9.08□□□□□ -0.96
VAPB-203ENST00000463370 LINC00694P0DN24 101 aa9.08□□□□□ -0.96
VAPB-203ENST00000463370 UBE2D3P61077 147 aa9.08□□□□□ -0.96
VAPB-203ENST00000463370 UBE2D2P62837 147 aa9.08□□□□□ -0.96
VAPB-203ENST00000463370 RPL36AP83881 106 aaKnown RBP9.08□□□□□ -0.96
VAPB-203ENST00000463370 DEFB135Q30KP9 77 aa9.08□□□□□ -0.96
VAPB-203ENST00000463370 Q6ZUT4 128 aa9.08□□□□□ -0.96
VAPB-203ENST00000463370 NFE4Q86UQ8 179 aa9.08□□□□□ -0.96
VAPB-203ENST00000463370 RPL36ALQ969Q0 106 aaKnown RBP9.08□□□□□ -0.96
VAPB-203ENST00000463370 HIGD1BQ9P298 99 aa9.08□□□□□ -0.96
VAPB-203ENST00000463370 FHL2Q14192 279 aa9.07□□□□□ -0.96
VAPB-203ENST00000463370 COX11Q9Y6N1 276 aa9.07□□□□□ -0.96
VAPB-203ENST00000463370 MYMXA0A1B0GTQ4 84 aa9.07□□□□□ -0.96
VAPB-203ENST00000463370 DEFB4AO15263 64 aa9.07□□□□□ -0.96
VAPB-203ENST00000463370 ZNF22P17026 224 aaPredicted RBP9.06□□□□□ -0.96
VAPB-203ENST00000463370 FXYD2P54710 66 aa9.06□□□□□ -0.96
VAPB-203ENST00000463370 PAPPA-AS1Q5QFB9 102 aa9.06□□□□□ -0.96
VAPB-203ENST00000463370 ORAOV1Q8WV07 137 aa9.06□□□□□ -0.96
VAPB-203ENST00000463370 TRGV4A0A0C4DH28 118 aa9.06□□□□□ -0.96
VAPB-203ENST00000463370 OXLD1Q5BKU9 147 aa9.06□□□□□ -0.96
VAPB-203ENST00000463370 PLEKHB2Q96CS7 222 aa9.06□□□□□ -0.96
VAPB-203ENST00000463370 SPANXA1Q9NS26 97 aa9.06□□□□□ -0.96
VAPB-203ENST00000463370 IGHV3-64A0A075B6Q5 118 aa9.05□□□□□ -0.96
VAPB-203ENST00000463370 GCSHP23434 173 aa9.05□□□□□ -0.96
VAPB-203ENST00000463370 LINC00469Q8N7U9 141 aa9.05□□□□□ -0.96
VAPB-203ENST00000463370 TRBV6-4A0A1B0GX49 114 aa9.05□□□□□ -0.96
VAPB-203ENST00000463370 ZNF815PA8K554 130 aa9.05□□□□□ -0.96
VAPB-203ENST00000463370 WIPF1O43516 503 aa9.05□□□□□ -0.96
VAPB-203ENST00000463370 NPSP0C0P6 89 aa9.05□□□□□ -0.96
VAPB-203ENST00000463370 DAZ4Q86SG3 579 aaKnown RBP9.05□□□□□ -0.96
VAPB-203ENST00000463370 DAZ3Q9NR90 486 aaKnown RBP9.05□□□□□ -0.96
VAPB-203ENST00000463370 TMEM223A0PJW6 202 aa9.04□□□□□ -0.96
VAPB-203ENST00000463370 SEC11AP67812 179 aa9.04□□□□□ -0.96
VAPB-203ENST00000463370 LINC00612Q8N6U2 182 aa9.04□□□□□ -0.96
VAPB-203ENST00000463370 MAST4O15021 2626 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 84.5 ms