RNA–Protein interactions for RNA: ENST00000463184.1

VARS-221, Transcript of valyl-tRNA synthetase, humanhuman

TSL 2

Gene VARS, Length 619 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-221ENST00000463184 CHCHD7Q9BUK0 85 aa12.94□□□□□ -0.34
VARS-221ENST00000463184 KLK12Q9UKR0 248 aa12.94□□□□□ -0.34
VARS-221ENST00000463184 A0A1B0GUT8 65 aa12.93□□□□□ -0.34
VARS-221ENST00000463184 F5H697 171 aa12.93□□□□□ -0.34
VARS-221ENST00000463184 MT-ND4LP03901 98 aa12.93□□□□□ -0.34
VARS-221ENST00000463184 NUP35Q8NFH5 326 aa12.93□□□□□ -0.34
VARS-221ENST00000463184 CIRBP-AS1Q8TBR5 109 aa12.93□□□□□ -0.34
VARS-221ENST00000463184 ANAPC16Q96DE5 110 aa12.93□□□□□ -0.34
VARS-221ENST00000463184 DPH3P1Q9H4G8 78 aa12.93□□□□□ -0.34
VARS-221ENST00000463184 KCNIP4Q6PIL6 250 aa12.92□□□□□ -0.34
VARS-221ENST00000463184 SMIM15Q7Z3B0 74 aa12.92□□□□□ -0.34
VARS-221ENST00000463184 UBE2WQ96B02 151 aa12.92□□□□□ -0.34
VARS-221ENST00000463184 DNAJC30Q96LL9 226 aa12.92□□□□□ -0.34
VARS-221ENST00000463184 LRP1Q07954 4544 aaKnown RBP12.91□□□□□ -0.34
VARS-221ENST00000463184 A0A087WX48 190 aa12.91□□□□□ -0.34
VARS-221ENST00000463184 TRBV10-1A0A0K0K1A3 114 aa12.91□□□□□ -0.34
VARS-221ENST00000463184 MGPP08493 103 aa12.91□□□□□ -0.34
VARS-221ENST00000463184 Q0VG73 95 aa12.91□□□□□ -0.34
VARS-221ENST00000463184 C10orf91Q5T1B1 145 aa12.91□□□□□ -0.34
VARS-221ENST00000463184 ATRAIDQ6UW56 229 aa12.91□□□□□ -0.34
VARS-221ENST00000463184 RIGQ13278 110 aa12.9□□□□□ -0.34
VARS-221ENST00000463184 C14orf177Q52M58 125 aa12.89□□□□□ -0.35
VARS-221ENST00000463184 CARHSP1Q9Y2V2 147 aaKnown RBP12.89□□□□□ -0.35
VARS-221ENST00000463184 H7C1H1 209 aa12.87□□□□□ -0.35
VARS-221ENST00000463184 RPL36AP83881 106 aaKnown RBP12.87□□□□□ -0.35
VARS-221ENST00000463184 SUMO4Q6EEV6 95 aa12.87□□□□□ -0.35
VARS-221ENST00000463184 RPL36ALQ969Q0 106 aaKnown RBP12.87□□□□□ -0.35
VARS-221ENST00000463184 TRBV7-3A0A075B6L6 115 aa12.86□□□□□ -0.35
VARS-221ENST00000463184 M0QY20 66 aa12.86□□□□□ -0.35
VARS-221ENST00000463184 NEXN-AS1Q8NBZ9 246 aa12.86□□□□□ -0.35
VARS-221ENST00000463184 C1orf43Q9BWL3 253 aa12.86□□□□□ -0.35
VARS-221ENST00000463184 CTDSP1Q9GZU7 261 aa12.86□□□□□ -0.35
VARS-221ENST00000463184 TMEM191AQ9H0A3 160 aa12.86□□□□□ -0.35
VARS-221ENST00000463184 HMCN2Q8NDA2 5059 aa12.85□□□□□ -0.35
VARS-221ENST00000463184 A0A1B0GW15 77 aa12.85□□□□□ -0.35
VARS-221ENST00000463184 UBE2D3P61077 147 aa12.85□□□□□ -0.35
VARS-221ENST00000463184 UBE2D2P62837 147 aa12.85□□□□□ -0.35
VARS-221ENST00000463184 FAT3Q8TDW7 4589 aa12.84□□□□□ -0.35
VARS-221ENST00000463184 TMEM262E9PQX1 116 aa12.84□□□□□ -0.35
VARS-221ENST00000463184 S100A8P05109 93 aa12.83□□□□□ -0.36
VARS-221ENST00000463184 RASL11AQ6T310 242 aa12.83□□□□□ -0.36
VARS-221ENST00000463184 ENHOQ6UWT2 76 aa12.83□□□□□ -0.36
VARS-221ENST00000463184 IMMP2LQ96T52 175 aa12.83□□□□□ -0.36
VARS-221ENST00000463184 PLA2G2DQ9UNK4 145 aa12.83□□□□□ -0.36
VARS-221ENST00000463184 CRPP02741 224 aa12.82□□□□□ -0.36
VARS-221ENST00000463184 RPL37AP61513 92 aaKnown RBP12.82□□□□□ -0.36
VARS-221ENST00000463184 NDUFA5Q16718 116 aa12.82□□□□□ -0.36
VARS-221ENST00000463184 ATP5L2Q7Z4Y8 100 aa12.82□□□□□ -0.36
VARS-221ENST00000463184 CLRN3Q8NCR9 226 aa12.82□□□□□ -0.36
VARS-221ENST00000463184 TRBV6-8A0A0A6YYG3 113 aa12.81□□□□□ -0.36
VARS-221ENST00000463184 CAMPP49913 170 aa12.81□□□□□ -0.36
VARS-221ENST00000463184 HBBP68871 147 aa12.81□□□□□ -0.36
VARS-221ENST00000463184 RHEBQ15382 184 aa12.81□□□□□ -0.36
VARS-221ENST00000463184 MRPL54Q6P161 138 aaKnown RBP12.81□□□□□ -0.36
VARS-221ENST00000463184 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.81□□□□□ -0.36
VARS-221ENST00000463184 GATD1Q8NB37 220 aa12.81□□□□□ -0.36
VARS-221ENST00000463184 NIT2Q9NQR4 276 aa12.81□□□□□ -0.36
VARS-221ENST00000463184 TRAV26-2A0A0B4J265 109 aa12.8□□□□□ -0.36
VARS-221ENST00000463184 A0A1B0GXF2 115 aa12.8□□□□□ -0.36
VARS-221ENST00000463184 C7orf77A4D0Y5 90 aa12.8□□□□□ -0.36
VARS-221ENST00000463184 APOC3P02656 99 aa12.8□□□□□ -0.36
VARS-221ENST00000463184 RAB4AP20338 218 aa12.8□□□□□ -0.36
VARS-221ENST00000463184 RNF185Q96GF1 192 aa12.8□□□□□ -0.36
VARS-221ENST00000463184 TMEM242Q9NWH2 141 aa12.8□□□□□ -0.36
VARS-221ENST00000463184 PKIAP61925 76 aa12.79□□□□□ -0.36
VARS-221ENST00000463184 AMN1Q8IY45 258 aa12.79□□□□□ -0.36
VARS-221ENST00000463184 USP17L23D6RBM5 183 aa12.78□□□□□ -0.36
VARS-221ENST00000463184 ANGP03950 147 aaKnown RBP12.78□□□□□ -0.36
VARS-221ENST00000463184 MPV17L2Q567V2 206 aa12.78□□□□□ -0.36
VARS-221ENST00000463184 FAM104BQ5XKR9 115 aa12.78□□□□□ -0.36
VARS-221ENST00000463184 DGAT2L7PQ6IED9 249 aa12.78□□□□□ -0.36
VARS-221ENST00000463184 SLC7A5P1Q8MH63 180 aa12.78□□□□□ -0.36
VARS-221ENST00000463184 SVBPQ8N300 66 aa12.78□□□□□ -0.36
VARS-221ENST00000463184 MRAP2Q96G30 205 aa12.78□□□□□ -0.36
VARS-221ENST00000463184 BTF3L4Q96K17 158 aa12.78□□□□□ -0.36
VARS-221ENST00000463184 RPS10P5Q9NQ39 176 aa12.78□□□□□ -0.36
VARS-221ENST00000463184 PKHD1L1Q86WI1 4243 aa12.77□□□□□ -0.36
VARS-221ENST00000463184 SNAPINO95295 136 aa12.77□□□□□ -0.37
VARS-221ENST00000463184 MIAQ16674 131 aa12.77□□□□□ -0.37
VARS-221ENST00000463184 TRAV9-1A0A075B6T8 112 aa12.76□□□□□ -0.37
VARS-221ENST00000463184 HLA-DQA1P01909 254 aa12.76□□□□□ -0.37
VARS-221ENST00000463184 PRSS1P07477 247 aa12.76□□□□□ -0.37
VARS-221ENST00000463184 TMEM97Q5BJF2 176 aa12.76□□□□□ -0.37
VARS-221ENST00000463184 CHCHD5Q9BSY4 110 aa12.76□□□□□ -0.37
VARS-221ENST00000463184 S100PP25815 95 aa12.75□□□□□ -0.37
VARS-221ENST00000463184 UBR4Q5T4S7 5183 aa12.75□□□□□ -0.37
VARS-221ENST00000463184 C9orf163Q8N9P6 203 aa12.75□□□□□ -0.37
VARS-221ENST00000463184 RPL39LQ96EH5 51 aaKnown RBP12.75□□□□□ -0.37
VARS-221ENST00000463184 MRPL51Q4U2R6 128 aaKnown RBP12.74□□□□□ -0.37
VARS-221ENST00000463184 TRBV6-5A0A0K0K1A5 114 aa12.73□□□□□ -0.37
VARS-221ENST00000463184 PPP1R17O96001 155 aa12.73□□□□□ -0.37
VARS-221ENST00000463184 HNRNPA3P51991 378 aaKnown RBP12.73□□□□□ -0.37
VARS-221ENST00000463184 GAS8-AS1O95177 125 aa12.72□□□□□ -0.37
VARS-221ENST00000463184 PRR34Q9NV39 138 aa12.72□□□□□ -0.37
VARS-221ENST00000463184 SMKR1H3BMG3 65 aa12.71□□□□□ -0.37
VARS-221ENST00000463184 ST20Q9HBF5 79 aa12.71□□□□□ -0.37
VARS-221ENST00000463184 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.71□□□□□ -0.37
VARS-221ENST00000463184 SDHAF1A6NFY7 115 aa12.7□□□□□ -0.38
VARS-221ENST00000463184 NCR2O95944 276 aa12.7□□□□□ -0.38
VARS-221ENST00000463184 CKS2P33552 79 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 223.3 ms