RNA–Protein interactions for RNA: ENST00000463147.1

USH2A-203, Transcript of usherin, humanhuman

TSL 2

Gene USH2A, Length 618 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH2A-203ENST00000463147 Q6ZS92 163 aa1.73□□□□□ -2.13
USH2A-203ENST00000463147 Q8IYB0 196 aa1.73□□□□□ -2.13
USH2A-203ENST00000463147 FAM19A2Q8N3H0 131 aa1.73□□□□□ -2.13
USH2A-203ENST00000463147 OR4C12Q96R67 309 aa1.73□□□□□ -2.13
USH2A-203ENST00000463147 WFDC6Q9BQY6 131 aa1.73□□□□□ -2.13
USH2A-203ENST00000463147 SLC50A1Q9BRV3 221 aa1.73□□□□□ -2.13
USH2A-203ENST00000463147 OTORQ9NRC9 128 aa1.73□□□□□ -2.13
USH2A-203ENST00000463147 RPRMQ9NS64 109 aa1.73□□□□□ -2.13
USH2A-203ENST00000463147 NHP2Q9NX24 153 aaKnown RBP1.73□□□□□ -2.13
USH2A-203ENST00000463147 TAS2R4Q9NYW5 299 aa1.73□□□□□ -2.13
USH2A-203ENST00000463147 LINC00312Q9Y6C7 94 aa1.73□□□□□ -2.13
USH2A-203ENST00000463147 ZNF831Q5JPB2 1677 aa1.73□□□□□ -2.13
USH2A-203ENST00000463147 UBR3Q6ZT12 1888 aa1.73□□□□□ -2.13
USH2A-203ENST00000463147 HELZP42694 1942 aaKnown RBP1.72□□□□□ -2.13
USH2A-203ENST00000463147 ANAPC1Q9H1A4 1944 aa1.72□□□□□ -2.13
USH2A-203ENST00000463147 ANK1P16157 1881 aa1.72□□□□□ -2.13
USH2A-203ENST00000463147 TRAV27A0A087WT01 109 aa1.72□□□□□ -2.13
USH2A-203ENST00000463147 TRAV5A0A0B4J249 113 aa1.72□□□□□ -2.13
USH2A-203ENST00000463147 A0A1B0GX51 115 aa1.72□□□□□ -2.13
USH2A-203ENST00000463147 C9JAW5 83 aa1.72□□□□□ -2.13
USH2A-203ENST00000463147 F2Z2F3 143 aa1.72□□□□□ -2.13
USH2A-203ENST00000463147 H3BMG7 143 aa1.72□□□□□ -2.13
USH2A-203ENST00000463147 H3BSH0 61 aa1.72□□□□□ -2.13
USH2A-203ENST00000463147 CCDC179H3BU77 68 aa1.72□□□□□ -2.13
USH2A-203ENST00000463147 SSSCA1O60232 199 aa1.72□□□□□ -2.13
USH2A-203ENST00000463147 LEPROTL1O95214 131 aa1.72□□□□□ -2.13
USH2A-203ENST00000463147 OR2H2O95918 312 aa1.72□□□□□ -2.13
USH2A-203ENST00000463147 SLC25A5P05141 298 aaKnown RBP1.72□□□□□ -2.13
USH2A-203ENST00000463147 HMGN2P05204 90 aaKnown RBP1.72□□□□□ -2.13
USH2A-203ENST00000463147 ASIPP42127 132 aa1.72□□□□□ -2.13
USH2A-203ENST00000463147 HBBP68871 147 aa1.72□□□□□ -2.13
USH2A-203ENST00000463147 EIF3IQ13347 325 aaKnown RBP1.72□□□□□ -2.13
USH2A-203ENST00000463147 WFDC2Q14508 124 aa1.72□□□□□ -2.13
USH2A-203ENST00000463147 ETDBQ3ZM63 59 aa1.72□□□□□ -2.13
USH2A-203ENST00000463147 Q6AWC8 147 aa1.72□□□□□ -2.13
USH2A-203ENST00000463147 PPDPFLQ8WWR9 84 aa1.72□□□□□ -2.13
USH2A-203ENST00000463147 CHCHD1Q96BP2 118 aaKnown RBP1.72□□□□□ -2.13
USH2A-203ENST00000463147 PRELID3AQ96N28 172 aa1.72□□□□□ -2.13
USH2A-203ENST00000463147 NAA38Q9BRA0 125 aaKnown RBP1.72□□□□□ -2.13
USH2A-203ENST00000463147 HIGD1AQ9Y241 93 aa1.72□□□□□ -2.13
USH2A-203ENST00000463147 HILPDAQ9Y5L2 63 aa1.72□□□□□ -2.13
USH2A-203ENST00000463147 LY96Q9Y6Y9 160 aa1.72□□□□□ -2.13
USH2A-203ENST00000463147 XIRP1Q702N8 1843 aaKnown RBP1.72□□□□□ -2.13
USH2A-203ENST00000463147 NUP210Q8TEM1 1887 aaPredicted RBP1.71□□□□□ -2.14
USH2A-203ENST00000463147 TNRC6AQ8NDV7 1962 aaKnown RBP1.71□□□□□ -2.14
USH2A-203ENST00000463147 C3orf85A0A1B0GTC6 90 aa1.71□□□□□ -2.14
USH2A-203ENST00000463147 C2orf70A6NJV1 201 aa1.71□□□□□ -2.14
USH2A-203ENST00000463147 TMEM14DPA8MWL7 114 aa1.71□□□□□ -2.14
USH2A-203ENST00000463147 B4DSR2 109 aa1.71□□□□□ -2.14
USH2A-203ENST00000463147 ASAH2BP0C7U1 165 aa1.71□□□□□ -2.14
USH2A-203ENST00000463147 SSR2P43308 183 aa1.71□□□□□ -2.14
USH2A-203ENST00000463147 RPS28P62857 69 aaKnown RBP1.71□□□□□ -2.14
USH2A-203ENST00000463147 QRFPP83859 136 aa1.71□□□□□ -2.14
USH2A-203ENST00000463147 Q1T7F1 81 aa1.71□□□□□ -2.14
USH2A-203ENST00000463147 ESRGQ1W209 222 aa1.71□□□□□ -2.14
USH2A-203ENST00000463147 NMSQ5H8A3 153 aa1.71□□□□□ -2.14
USH2A-203ENST00000463147 SPANXN5Q5MJ07 72 aa1.71□□□□□ -2.14
USH2A-203ENST00000463147 C9orf153Q5TBE3 101 aa1.71□□□□□ -2.14
USH2A-203ENST00000463147 LINC01590Q5TEZ4 76 aa1.71□□□□□ -2.14
USH2A-203ENST00000463147 ZNF625Q96I27 306 aaPredicted RBP1.71□□□□□ -2.14
USH2A-203ENST00000463147 AMELYQ99218 206 aa1.71□□□□□ -2.14
USH2A-203ENST00000463147 C20orf78Q9BR46 151 aa1.71□□□□□ -2.14
USH2A-203ENST00000463147 OR2H1Q9GZK4 316 aa1.71□□□□□ -2.14
USH2A-203ENST00000463147 PSENENQ9NZ42 101 aa1.71□□□□□ -2.14
USH2A-203ENST00000463147 PLXNA1Q9UIW2 1896 aa1.71□□□□□ -2.14
USH2A-203ENST00000463147 FN1P02751 2386 aaKnown RBP1.7□□□□□ -2.14
USH2A-203ENST00000463147 TRBV20-1A0A075B6N2 111 aa1.7□□□□□ -2.14
USH2A-203ENST00000463147 IGHV1-24A0A0C4DH33 117 aa1.7□□□□□ -2.14
USH2A-203ENST00000463147 A8MWV9 139 aa1.7□□□□□ -2.14
USH2A-203ENST00000463147 NPFFO15130 113 aa1.7□□□□□ -2.14
USH2A-203ENST00000463147 LINC00694P0DN24 101 aa1.7□□□□□ -2.14
USH2A-203ENST00000463147 FXYD4P59646 89 aa1.7□□□□□ -2.14
USH2A-203ENST00000463147 DIAPH2-AS1Q14236 149 aa1.7□□□□□ -2.14
USH2A-203ENST00000463147 VMA21Q3ZAQ7 101 aa1.7□□□□□ -2.14
USH2A-203ENST00000463147 PATE2Q6UY27 113 aa1.7□□□□□ -2.14
USH2A-203ENST00000463147 LINC00305Q7Z4B0 112 aa1.7□□□□□ -2.14
USH2A-203ENST00000463147 C6orf201Q7Z4U5 140 aa1.7□□□□□ -2.14
USH2A-203ENST00000463147 TEN1Q86WV5 123 aa1.7□□□□□ -2.14
USH2A-203ENST00000463147 PRR15Q8IV56 129 aa1.7□□□□□ -2.14
USH2A-203ENST00000463147 OTOSQ8NHW6 89 aa1.7□□□□□ -2.14
USH2A-203ENST00000463147 ARHGAP5-AS1Q96IT6 56 aa1.7□□□□□ -2.14
USH2A-203ENST00000463147 HIGD1BQ9P298 99 aa1.7□□□□□ -2.14
USH2A-203ENST00000463147 R4GMQ9 66 aa1.7□□□□□ -2.14
USH2A-203ENST00000463147 V9GYV3 84 aa1.7□□□□□ -2.14
USH2A-203ENST00000463147 PCNX2A6NKB5 2137 aa1.7□□□□□ -2.14
USH2A-203ENST00000463147 PCDH15Q96QU1 1955 aa1.7□□□□□ -2.14
USH2A-203ENST00000463147 CASP8AP2Q9UKL3 1982 aa1.7□□□□□ -2.14
USH2A-203ENST00000463147 FBN1P35555 2871 aaKnown RBP1.69□□□□□ -2.14
USH2A-203ENST00000463147 MGAMO43451 1857 aa1.69□□□□□ -2.14
USH2A-203ENST00000463147 UBE2L5PA0A1B0GUS4 154 aa1.69□□□□□ -2.14
USH2A-203ENST00000463147 A0A1B0GWA3 101 aa1.69□□□□□ -2.14
USH2A-203ENST00000463147 LOC107986453A0A1B0GWG9 222 aa1.69□□□□□ -2.14
USH2A-203ENST00000463147 OVOL1O14753 267 aa1.69□□□□□ -2.14
USH2A-203ENST00000463147 UQCRQO14949 82 aa1.69□□□□□ -2.14
USH2A-203ENST00000463147 SPINK4O60575 86 aa1.69□□□□□ -2.14
USH2A-203ENST00000463147 CRPP02741 224 aa1.69□□□□□ -2.14
USH2A-203ENST00000463147 SCTP09683 121 aa1.69□□□□□ -2.14
USH2A-203ENST00000463147 IGLC6P0CF74 106 aa1.69□□□□□ -2.14
USH2A-203ENST00000463147 DEFB113Q30KQ7 82 aa1.69□□□□□ -2.14
USH2A-203ENST00000463147 LINC01545Q5VT33 79 aa1.69□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms