RNA–Protein interactions for RNA: ENST00000463144.5

MSH5-211, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 2,296 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-211ENST00000463144 ZNRF2Q8NHG8 242 aa7.29□□□□□ -1.24
MSH5-211ENST00000463144 NOP10Q9NPE3 64 aaKnown RBP7.29□□□□□ -1.24
MSH5-211ENST00000463144 IGLV4-3A0A075B6K6 122 aa7.28□□□□□ -1.24
MSH5-211ENST00000463144 DAZ2Q13117 558 aaKnown RBP7.28□□□□□ -1.24
MSH5-211ENST00000463144 DNAJC30Q96LL9 226 aa7.28□□□□□ -1.24
MSH5-211ENST00000463144 CITED1Q99966 193 aa7.28□□□□□ -1.24
MSH5-211ENST00000463144 CHCHD7Q9BUK0 85 aa7.28□□□□□ -1.24
MSH5-211ENST00000463144 HIGD1BQ9P298 99 aa7.28□□□□□ -1.24
MSH5-211ENST00000463144 COX11Q9Y6N1 276 aa7.28□□□□□ -1.24
MSH5-211ENST00000463144 IGHV3-38A0A0C4DH36 116 aa7.27□□□□□ -1.24
MSH5-211ENST00000463144 HSD52Q0P140 79 aa7.27□□□□□ -1.24
MSH5-211ENST00000463144 PHLDA1Q8WV24 401 aaPredicted RBP7.27□□□□□ -1.24
MSH5-211ENST00000463144 C1QTNF4Q9BXJ3 329 aa7.27□□□□□ -1.24
MSH5-211ENST00000463144 E9PLD3 99 aa7.27□□□□□ -1.25
MSH5-211ENST00000463144 CEMP1Q6PRD7 247 aaPredicted RBP7.27□□□□□ -1.25
MSH5-211ENST00000463144 C16orf74Q96GX8 76 aa7.27□□□□□ -1.25
MSH5-211ENST00000463144 TRAV4A0A0B4J268 109 aa7.26□□□□□ -1.25
MSH5-211ENST00000463144 ORAOV1Q8WV07 137 aa7.26□□□□□ -1.25
MSH5-211ENST00000463144 PRADC1Q9BSG0 188 aa7.26□□□□□ -1.25
MSH5-211ENST00000463144 CHAC1Q9BUX1 264 aa7.26□□□□□ -1.25
MSH5-211ENST00000463144 PYGO1Q9Y3Y4 419 aa7.26□□□□□ -1.25
MSH5-211ENST00000463144 INSL3P51460 131 aa7.26□□□□□ -1.25
MSH5-211ENST00000463144 RRN3P1Q2M238 152 aa7.26□□□□□ -1.25
MSH5-211ENST00000463144 C9orf66Q5T8R8 295 aa7.26□□□□□ -1.25
MSH5-211ENST00000463144 OR11H2Q8NH07 326 aa7.26□□□□□ -1.25
MSH5-211ENST00000463144 OVOL2Q9BRP0 275 aa7.26□□□□□ -1.25
MSH5-211ENST00000463144 NOTCH3Q9UM47 2321 aa7.25□□□□□ -1.25
MSH5-211ENST00000463144 K7EP13 123 aa7.25□□□□□ -1.25
MSH5-211ENST00000463144 NPSP0C0P6 89 aa7.25□□□□□ -1.25
MSH5-211ENST00000463144 SEC11AP67812 179 aa7.25□□□□□ -1.25
MSH5-211ENST00000463144 GAGE1Q13065 139 aa7.25□□□□□ -1.25
MSH5-211ENST00000463144 PAPPA-AS1Q5QFB9 102 aa7.25□□□□□ -1.25
MSH5-211ENST00000463144 NFE4Q86UQ8 179 aa7.25□□□□□ -1.25
MSH5-211ENST00000463144 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.25□□□□□ -1.25
MSH5-211ENST00000463144 MYMXA0A1B0GTQ4 84 aa7.25□□□□□ -1.25
MSH5-211ENST00000463144 GAGE12BA1L429 117 aa7.25□□□□□ -1.25
MSH5-211ENST00000463144 IGKV2-29A2NJV5 120 aaPredicted RBP7.25□□□□□ -1.25
MSH5-211ENST00000463144 GAGE7O76087 117 aa7.25□□□□□ -1.25
MSH5-211ENST00000463144 GAGE12FP0CL80 117 aa7.25□□□□□ -1.25
MSH5-211ENST00000463144 GAGE12GP0CL81 117 aa7.25□□□□□ -1.25
MSH5-211ENST00000463144 GAGE12IP0CL82 117 aa7.25□□□□□ -1.25
MSH5-211ENST00000463144 SLC25A29Q8N8R3 303 aa7.25□□□□□ -1.25
MSH5-211ENST00000463144 AMELXQ99217 191 aa7.25□□□□□ -1.25
MSH5-211ENST00000463144 UBE2D4Q9Y2X8 147 aa7.25□□□□□ -1.25
MSH5-211ENST00000463144 F8P00451 2351 aa7.24□□□□□ -1.25
MSH5-211ENST00000463144 A0A0J9YXV3 536 aa7.24□□□□□ -1.25
MSH5-211ENST00000463144 K7EQD1 137 aa7.24□□□□□ -1.25
MSH5-211ENST00000463144 VCX2Q9H322 139 aa7.24□□□□□ -1.25
MSH5-211ENST00000463144 TEP1Q99973 2627 aaKnown RBP7.24□□□□□ -1.25
MSH5-211ENST00000463144 TRBV7-3A0A075B6L6 115 aa7.24□□□□□ -1.25
MSH5-211ENST00000463144 COTL1Q14019 142 aa7.24□□□□□ -1.25
MSH5-211ENST00000463144 TMEM170BQ5T4T1 132 aa7.24□□□□□ -1.25
MSH5-211ENST00000463144 TRBV10-1A0A0K0K1A3 114 aa7.23□□□□□ -1.25
MSH5-211ENST00000463144 FXYD2P54710 66 aa7.23□□□□□ -1.25
MSH5-211ENST00000463144 TSPEAR-AS2P59090 65 aa7.23□□□□□ -1.25
MSH5-211ENST00000463144 RNASE13Q5GAN3 156 aaKnown RBP7.23□□□□□ -1.25
MSH5-211ENST00000463144 NTM-AS1Q6ZSK4 140 aa7.23□□□□□ -1.25
MSH5-211ENST00000463144 TRRAPQ9Y4A5 3859 aa7.23□□□□□ -1.25
MSH5-211ENST00000463144 ZNF22P17026 224 aaPredicted RBP7.22□□□□□ -1.25
MSH5-211ENST00000463144 GCSHP23434 173 aa7.22□□□□□ -1.25
MSH5-211ENST00000463144 ATRQ13535 2644 aa7.22□□□□□ -1.25
MSH5-211ENST00000463144 TRGV2A0A075B6R0 118 aa7.22□□□□□ -1.25
MSH5-211ENST00000463144 GAGE12JA6NER3 117 aa7.22□□□□□ -1.25
MSH5-211ENST00000463144 CRYBA4P53673 196 aa7.22□□□□□ -1.25
MSH5-211ENST00000463144 UBE2D3P61077 147 aa7.22□□□□□ -1.25
MSH5-211ENST00000463144 UBE2D2P62837 147 aa7.22□□□□□ -1.25
MSH5-211ENST00000463144 RPL36AP83881 106 aaKnown RBP7.22□□□□□ -1.25
MSH5-211ENST00000463144 GAGE4Q13068 117 aa7.22□□□□□ -1.25
MSH5-211ENST00000463144 GAGE5Q13069 117 aa7.22□□□□□ -1.25
MSH5-211ENST00000463144 GAGE13Q4V321 117 aa7.22□□□□□ -1.25
MSH5-211ENST00000463144 RPL36ALQ969Q0 106 aaKnown RBP7.22□□□□□ -1.25
MSH5-211ENST00000463144 PLEKHB2Q96CS7 222 aa7.22□□□□□ -1.25
MSH5-211ENST00000463144 TM2D2Q9BX73 214 aa7.22□□□□□ -1.25
MSH5-211ENST00000463144 X6R8D5 127 aa7.22□□□□□ -1.25
MSH5-211ENST00000463144 LOC100131303A0A0U1RQF7 123 aa7.21□□□□□ -1.25
MSH5-211ENST00000463144 TMEM223A0PJW6 202 aa7.21□□□□□ -1.25
MSH5-211ENST00000463144 A6NDN8 102 aa7.21□□□□□ -1.25
MSH5-211ENST00000463144 ZNF815PA8K554 130 aa7.21□□□□□ -1.25
MSH5-211ENST00000463144 HERVK_113P61574 105 aa7.21□□□□□ -1.25
MSH5-211ENST00000463144 Q6ZUT4 128 aa7.21□□□□□ -1.25
MSH5-211ENST00000463144 CEND1Q8N111 149 aa7.21□□□□□ -1.25
MSH5-211ENST00000463144 SPANXA1Q9NS26 97 aa7.21□□□□□ -1.25
MSH5-211ENST00000463144 H3BRM9 83 aa7.21□□□□□ -1.26
MSH5-211ENST00000463144 MRPS36P82909 103 aaKnown RBP7.21□□□□□ -1.26
MSH5-211ENST00000463144 FHL2Q14192 279 aa7.21□□□□□ -1.26
MSH5-211ENST00000463144 WFDC9Q8NEX5 89 aa7.21□□□□□ -1.26
MSH5-211ENST00000463144 CCL25O15444 150 aa7.2□□□□□ -1.26
MSH5-211ENST00000463144 LINC00694P0DN24 101 aa7.2□□□□□ -1.26
MSH5-211ENST00000463144 TAL2Q16559 108 aa7.2□□□□□ -1.26
MSH5-211ENST00000463144 TRBV6-4A0A1B0GX49 114 aa7.2□□□□□ -1.26
MSH5-211ENST00000463144 DAZ4Q86SG3 579 aaKnown RBP7.2□□□□□ -1.26
MSH5-211ENST00000463144 DAZ3Q9NR90 486 aaKnown RBP7.2□□□□□ -1.26
MSH5-211ENST00000463144 UBE2V1Q13404 147 aa7.19□□□□□ -1.26
MSH5-211ENST00000463144 SBSPONQ8IVN8 264 aa7.19□□□□□ -1.26
MSH5-211ENST00000463144 LINC00612Q8N6U2 182 aa7.19□□□□□ -1.26
MSH5-211ENST00000463144 RAB37Q96AX2 223 aa7.19□□□□□ -1.26
MSH5-211ENST00000463144 HIST1H4GQ99525 98 aa7.19□□□□□ -1.26
MSH5-211ENST00000463144 IGHV3-64A0A075B6Q5 118 aa7.18□□□□□ -1.26
MSH5-211ENST00000463144 TRGV4A0A0C4DH28 118 aa7.18□□□□□ -1.26
MSH5-211ENST00000463144 C9orf118A6NHY6 69 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 77.9 ms