RNA–Protein interactions for RNA: ENST00000462212.5

ITSN1-222, Transcript of intersectin 1, human

TSL 1 (best)

Gene ITSN1, Length 1,102 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ITSN1-222	ENST00000462212	LINC00469	Q8N7U9	141 aa		5.52	□□□□□ -1.53
ITSN1-222	ENST00000462212		Q8N976	141 aa		5.52	□□□□□ -1.53
ITSN1-222	ENST00000462212	NUP35	Q8NFH5	326 aa		5.52	□□□□□ -1.53
ITSN1-222	ENST00000462212	TMEM191A	Q9H0A3	160 aa		5.52	□□□□□ -1.53
ITSN1-222	ENST00000462212	PRR34	Q9NV39	138 aa		5.52	□□□□□ -1.53
ITSN1-222	ENST00000462212	IGKV2D-24	A0A075B6R9	120 aa		5.51	□□□□□ -1.53
ITSN1-222	ENST00000462212	TRBV6-5	A0A0K0K1A5	114 aa		5.51	□□□□□ -1.53
ITSN1-222	ENST00000462212		A0A1B0GUV1	79 aa		5.51	□□□□□ -1.53
ITSN1-222	ENST00000462212	S100A6	P06703	90 aa		5.51	□□□□□ -1.53
ITSN1-222	ENST00000462212	KRTAP10-1	P60331	282 aa		5.51	□□□□□ -1.53
ITSN1-222	ENST00000462212	GAGE6	Q13070	117 aa		5.51	□□□□□ -1.53
ITSN1-222	ENST00000462212	ADIRF	Q15847	76 aa		5.51	□□□□□ -1.53
ITSN1-222	ENST00000462212	BORCS7	Q96B45	105 aa		5.51	□□□□□ -1.53
ITSN1-222	ENST00000462212	RPL39L	Q96EH5	51 aa	Known RBP	5.51	□□□□□ -1.53
ITSN1-222	ENST00000462212	RNF185	Q96GF1	192 aa		5.51	□□□□□ -1.53
ITSN1-222	ENST00000462212	TMEM243	Q9BU79	118 aa		5.51	□□□□□ -1.53
ITSN1-222	ENST00000462212	PCLO	Q9Y6V0	5065 aa		5.51	□□□□□ -1.53
ITSN1-222	ENST00000462212	SMIM27	A0A1W2PRY6	76 aa		5.5	□□□□□ -1.53
ITSN1-222	ENST00000462212	GAS8-AS1	O95177	125 aa		5.5	□□□□□ -1.53
ITSN1-222	ENST00000462212	CRP	P02741	224 aa		5.5	□□□□□ -1.53
ITSN1-222	ENST00000462212	ANG	P03950	147 aa	Known RBP	5.5	□□□□□ -1.53
ITSN1-222	ENST00000462212	GCSH	P23434	173 aa		5.5	□□□□□ -1.53
ITSN1-222	ENST00000462212	LOR	P23490	312 aa	Predicted RBP	5.5	□□□□□ -1.53
ITSN1-222	ENST00000462212	RIG	Q13278	110 aa		5.5	□□□□□ -1.53
ITSN1-222	ENST00000462212	COTL1	Q14019	142 aa		5.5	□□□□□ -1.53
ITSN1-222	ENST00000462212	MIA	Q16674	131 aa		5.5	□□□□□ -1.53
ITSN1-222	ENST00000462212	BAALC	Q8WXS3	180 aa		5.5	□□□□□ -1.53
ITSN1-222	ENST00000462212	NAT8B	Q9UHF3	227 aa		5.5	□□□□□ -1.53
ITSN1-222	ENST00000462212	ABCA13	Q86UQ4	5058 aa		5.49	□□□□□ -1.53
ITSN1-222	ENST00000462212	IGLV5-52	A0A0A0MRZ9	124 aa		5.49	□□□□□ -1.53
ITSN1-222	ENST00000462212	SDHAF1	A6NFY7	115 aa		5.49	□□□□□ -1.53
ITSN1-222	ENST00000462212	LECT2	O14960	151 aa		5.49	□□□□□ -1.53
ITSN1-222	ENST00000462212	NCR2	O95944	276 aa		5.49	□□□□□ -1.53
ITSN1-222	ENST00000462212	RAB4A	P20338	218 aa		5.49	□□□□□ -1.53
ITSN1-222	ENST00000462212	AMT	P48728	403 aa		5.49	□□□□□ -1.53
ITSN1-222	ENST00000462212	XG	P55808	180 aa		5.49	□□□□□ -1.53
ITSN1-222	ENST00000462212	C4orf48	Q5BLP8	95 aa		5.49	□□□□□ -1.53
ITSN1-222	ENST00000462212	CLLU1	Q5K131	121 aa		5.49	□□□□□ -1.53
ITSN1-222	ENST00000462212	KRTAP26-1	Q6PEX3	210 aa		5.49	□□□□□ -1.53
ITSN1-222	ENST00000462212	LINC00269	Q8N2A0	174 aa		5.49	□□□□□ -1.53
ITSN1-222	ENST00000462212	C20orf203	Q8NBC4	194 aa		5.49	□□□□□ -1.53
ITSN1-222	ENST00000462212	MRAP2	Q96G30	205 aa		5.49	□□□□□ -1.53
ITSN1-222	ENST00000462212	C1orf43	Q9BWL3	253 aa		5.49	□□□□□ -1.53
ITSN1-222	ENST00000462212	KRTAP4-5	Q9BYR2	181 aa		5.49	□□□□□ -1.53
ITSN1-222	ENST00000462212	DNAH8	Q96JB1	4490 aa		5.49	□□□□□ -1.53
ITSN1-222	ENST00000462212	IGLV4-60	A0A075B6I1	120 aa		5.48	□□□□□ -1.53
ITSN1-222	ENST00000462212		H7C423	109 aa		5.48	□□□□□ -1.53
ITSN1-222	ENST00000462212	RPS10	P46783	165 aa	Known RBP	5.48	□□□□□ -1.53
ITSN1-222	ENST00000462212	POLR2K	P53803	58 aa	Known RBP	5.48	□□□□□ -1.53
ITSN1-222	ENST00000462212	RAB14	P61106	215 aa		5.48	□□□□□ -1.53
ITSN1-222	ENST00000462212	REG3A	Q06141	175 aa		5.48	□□□□□ -1.53
ITSN1-222	ENST00000462212	AMN1	Q8IY45	258 aa		5.48	□□□□□ -1.53
ITSN1-222	ENST00000462212		Q8N1X5	172 aa		5.48	□□□□□ -1.53
ITSN1-222	ENST00000462212	DEFB104A	Q8WTQ1	72 aa		5.48	□□□□□ -1.53
ITSN1-222	ENST00000462212	TMEM70	Q9BUB7	260 aa		5.48	□□□□□ -1.53
ITSN1-222	ENST00000462212	TRBV27	A0A0K0K1C4	114 aa		5.47	□□□□□ -1.53
ITSN1-222	ENST00000462212		A0A1B0GW15	77 aa		5.47	□□□□□ -1.53
ITSN1-222	ENST00000462212		I3L3M4	83 aa		5.47	□□□□□ -1.53
ITSN1-222	ENST00000462212	FAM104B	Q5XKR9	115 aa		5.47	□□□□□ -1.53
ITSN1-222	ENST00000462212	CLPSL2	Q6UWE3	100 aa		5.47	□□□□□ -1.53
ITSN1-222	ENST00000462212	NRAC	Q8N912	160 aa		5.47	□□□□□ -1.53
ITSN1-222	ENST00000462212	ST20	Q9HBF5	79 aa		5.47	□□□□□ -1.53
ITSN1-222	ENST00000462212	IGLV2-33	A0A075B6J2	118 aa	Predicted RBP	5.46	□□□□□ -1.54
ITSN1-222	ENST00000462212	TRAV8-4	A0A0B4J246	113 aa		5.46	□□□□□ -1.54
ITSN1-222	ENST00000462212		A0A1B0GXF2	115 aa		5.46	□□□□□ -1.54
ITSN1-222	ENST00000462212	LINC00862	A6NCI5	91 aa		5.46	□□□□□ -1.54
ITSN1-222	ENST00000462212	UBE2L6	O14933	153 aa		5.46	□□□□□ -1.54
ITSN1-222	ENST00000462212	TSHB	P01222	138 aa		5.46	□□□□□ -1.54
ITSN1-222	ENST00000462212	APCS	P02743	223 aa		5.46	□□□□□ -1.54
ITSN1-222	ENST00000462212	ESD	P10768	282 aa		5.46	□□□□□ -1.54
ITSN1-222	ENST00000462212	PNRC1	Q12796	327 aa	Predicted RBP	5.46	□□□□□ -1.54
ITSN1-222	ENST00000462212	C14orf177	Q52M58	125 aa		5.46	□□□□□ -1.54
ITSN1-222	ENST00000462212		Q6ZSA8	131 aa		5.46	□□□□□ -1.54
ITSN1-222	ENST00000462212	USP17L23	D6RBM5	183 aa		5.45	□□□□□ -1.54
ITSN1-222	ENST00000462212	SMKR1	H3BMG3	65 aa		5.45	□□□□□ -1.54
ITSN1-222	ENST00000462212	PPP1R2P9	O14990	202 aa		5.45	□□□□□ -1.54
ITSN1-222	ENST00000462212	PPP1R17	O96001	155 aa		5.45	□□□□□ -1.54
ITSN1-222	ENST00000462212	PMCH	P20382	165 aa		5.45	□□□□□ -1.54
ITSN1-222	ENST00000462212	CAMP	P49913	170 aa		5.45	□□□□□ -1.54
ITSN1-222	ENST00000462212	HBB	P68871	147 aa		5.45	□□□□□ -1.54
ITSN1-222	ENST00000462212	MRPL51	Q4U2R6	128 aa	Known RBP	5.45	□□□□□ -1.54
ITSN1-222	ENST00000462212	FAM30A	Q9NZY2	134 aa		5.45	□□□□□ -1.54
ITSN1-222	ENST00000462212	IGLV10-54	A0A075B6I4	117 aa		5.44	□□□□□ -1.54
ITSN1-222	ENST00000462212	TRBV24-1	A0A075B6N3	115 aa		5.44	□□□□□ -1.54
ITSN1-222	ENST00000462212	IGKV2D-29	A0A075B6S2	120 aa	Predicted RBP	5.44	□□□□□ -1.54
ITSN1-222	ENST00000462212	IGKV2-29	A2NJV5	120 aa	Predicted RBP	5.44	□□□□□ -1.54
ITSN1-222	ENST00000462212	HLA-DQA1	P01909	254 aa		5.44	□□□□□ -1.54
ITSN1-222	ENST00000462212	S100A8	P05109	93 aa		5.44	□□□□□ -1.54
ITSN1-222	ENST00000462212	FGF6	P10767	208 aa		5.44	□□□□□ -1.54
ITSN1-222	ENST00000462212	ZNF25	P17030	456 aa	Predicted RBP	5.44	□□□□□ -1.54
ITSN1-222	ENST00000462212	SUMO2	P61956	95 aa	Known RBP	5.44	□□□□□ -1.54
ITSN1-222	ENST00000462212	RPL32	P62910	135 aa	Known RBP	5.44	□□□□□ -1.54
ITSN1-222	ENST00000462212	MRPL54	Q6P161	138 aa	Known RBP	5.44	□□□□□ -1.54
ITSN1-222	ENST00000462212	UQCC3	Q6UW78	93 aa		5.44	□□□□□ -1.54
ITSN1-222	ENST00000462212	ATP5L2	Q7Z4Y8	100 aa		5.44	□□□□□ -1.54
ITSN1-222	ENST00000462212	LINC00518	Q8N0U6	118 aa		5.44	□□□□□ -1.54
ITSN1-222	ENST00000462212	ANAPC16	Q96DE5	110 aa		5.44	□□□□□ -1.54
ITSN1-222	ENST00000462212	TMEM242	Q9NWH2	141 aa		5.44	□□□□□ -1.54
ITSN1-222	ENST00000462212	VPS13B	Q7Z7G8	4022 aa		5.43	□□□□□ -1.54
ITSN1-222	ENST00000462212	FAT1	Q14517	4588 aa		5.43	□□□□□ -1.54

Retrieved 100 of 20,778 RNA–protein pairs in 39 ms