RNA–Protein interactions for RNA: ENST00000461990.1

LINC01140-201, Transcript of long intergenic non-protein coding RNA 1140, humanhuman

TSL 1 (best) BASIC

Gene LINC01140, Length 3,181 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01140-201ENST00000461990 FAM19A1Q7Z5A9 133 aa6.74□□□□□ -1.33
LINC01140-201ENST00000461990 LY6G5BQ8NDX9 201 aa6.74□□□□□ -1.33
LINC01140-201ENST00000461990 GVINP1Q7Z2Y8 2422 aa6.74□□□□□ -1.33
LINC01140-201ENST00000461990 GPR179Q6PRD1 2367 aa6.74□□□□□ -1.33
LINC01140-201ENST00000461990 TRAV7A0A075B6U4 112 aa6.73□□□□□ -1.33
LINC01140-201ENST00000461990 FAM110DQ8TAY7 271 aaPredicted RBP6.73□□□□□ -1.33
LINC01140-201ENST00000461990 BRK1Q8WUW1 75 aa6.73□□□□□ -1.33
LINC01140-201ENST00000461990 U3KQE9 123 aa6.73□□□□□ -1.33
LINC01140-201ENST00000461990 SIRPDQ9H106 197 aa6.73□□□□□ -1.33
LINC01140-201ENST00000461990 ABCA1O95477 2261 aa6.72□□□□□ -1.33
LINC01140-201ENST00000461990 M0QY20 66 aa6.72□□□□□ -1.33
LINC01140-201ENST00000461990 IGF1P05019 195 aa6.72□□□□□ -1.33
LINC01140-201ENST00000461990 C9orf106Q8NAJ2 232 aa6.72□□□□□ -1.33
LINC01140-201ENST00000461990 C14orf132Q9NPU4 83 aa6.72□□□□□ -1.33
LINC01140-201ENST00000461990 M0R1B8 84 aa6.72□□□□□ -1.33
LINC01140-201ENST00000461990 CCKP06307 115 aa6.72□□□□□ -1.33
LINC01140-201ENST00000461990 HIST2H2BCQ6DN03 193 aa6.72□□□□□ -1.33
LINC01140-201ENST00000461990 HIST2H2BDQ6DRA6 164 aa6.72□□□□□ -1.33
LINC01140-201ENST00000461990 LYPD2Q6UXB3 125 aa6.72□□□□□ -1.33
LINC01140-201ENST00000461990 CEP250Q9BV73 2442 aa6.72□□□□□ -1.33
LINC01140-201ENST00000461990 CACNA1GO43497 2377 aa6.72□□□□□ -1.33
LINC01140-201ENST00000461990 GNRH2O43555 120 aa6.71□□□□□ -1.33
LINC01140-201ENST00000461990 NDUFC1O43677 76 aa6.71□□□□□ -1.33
LINC01140-201ENST00000461990 LINC00482Q8N8I6 264 aa6.71□□□□□ -1.33
LINC01140-201ENST00000461990 IGLV5-45A0A087WSX0 123 aa6.71□□□□□ -1.34
LINC01140-201ENST00000461990 RPL11P62913 178 aaKnown RBP6.71□□□□□ -1.34
LINC01140-201ENST00000461990 TRBV7-6A0A0J9YX20 115 aa6.71□□□□□ -1.34
LINC01140-201ENST00000461990 HILS1P60008 231 aa6.71□□□□□ -1.34
LINC01140-201ENST00000461990 C9orf129Q5T035 196 aaKnown RBP6.71□□□□□ -1.34
LINC01140-201ENST00000461990 ASPMQ8IZT6 3477 aa6.71□□□□□ -1.34
LINC01140-201ENST00000461990 A0A0U1RQV1 116 aa6.7□□□□□ -1.34
LINC01140-201ENST00000461990 IGHV3-23P01764 117 aa6.7□□□□□ -1.34
LINC01140-201ENST00000461990 PLA2G2CQ5R387 149 aa6.7□□□□□ -1.34
LINC01140-201ENST00000461990 SOCS3O14543 225 aa6.7□□□□□ -1.34
LINC01140-201ENST00000461990 SOSTDC1Q6X4U4 206 aa6.7□□□□□ -1.34
LINC01140-201ENST00000461990 SPTBN2O15020 2390 aa6.7□□□□□ -1.34
LINC01140-201ENST00000461990 CACNA1HO95180 2353 aa6.7□□□□□ -1.34
LINC01140-201ENST00000461990 CD28P10747 220 aa6.69□□□□□ -1.34
LINC01140-201ENST00000461990 PRR15Q8IV56 129 aa6.69□□□□□ -1.34
LINC01140-201ENST00000461990 DEFB104AQ8WTQ1 72 aa6.69□□□□□ -1.34
LINC01140-201ENST00000461990 Q9HAA7 133 aa6.69□□□□□ -1.34
LINC01140-201ENST00000461990 TRAV23DV6A0A075B6W5 121 aa6.69□□□□□ -1.34
LINC01140-201ENST00000461990 PIEZO1Q92508 2521 aa6.69□□□□□ -1.34
LINC01140-201ENST00000461990 Q6ZRU5 148 aa6.69□□□□□ -1.34
LINC01140-201ENST00000461990 ZNF625Q96I27 306 aaPredicted RBP6.69□□□□□ -1.34
LINC01140-201ENST00000461990 A8MZ25 164 aa6.68□□□□□ -1.34
LINC01140-201ENST00000461990 F5H697 171 aa6.68□□□□□ -1.34
LINC01140-201ENST00000461990 ZNF561-AS1K7EIQ3 104 aa6.68□□□□□ -1.34
LINC01140-201ENST00000461990 LINC00474Q9P2X8 69 aa6.68□□□□□ -1.34
LINC01140-201ENST00000461990 A0A087WWL8 130 aa6.68□□□□□ -1.34
LINC01140-201ENST00000461990 TRAV13-2A0A0B4J235 113 aa6.68□□□□□ -1.34
LINC01140-201ENST00000461990 IGLV5-39A0A0G2JS06 123 aa6.68□□□□□ -1.34
LINC01140-201ENST00000461990 IBA57-AS1B1ANH7 110 aa6.68□□□□□ -1.34
LINC01140-201ENST00000461990 NDPQ00604 133 aa6.68□□□□□ -1.34
LINC01140-201ENST00000461990 IGHV3OR16-8A0A075B7F1 116 aa6.67□□□□□ -1.34
LINC01140-201ENST00000461990 PMAIP1Q13794 54 aa6.67□□□□□ -1.34
LINC01140-201ENST00000461990 LAMTOR3Q9UHA4 124 aa6.67□□□□□ -1.34
LINC01140-201ENST00000461990 H0YGX0 51 aa6.67□□□□□ -1.34
LINC01140-201ENST00000461990 CFAP47Q6ZTR5 3102 aa6.67□□□□□ -1.34
LINC01140-201ENST00000461990 ICE1Q9Y2F5 2266 aa6.67□□□□□ -1.34
LINC01140-201ENST00000461990 OTOGLQ3ZCN5 2332 aa6.66□□□□□ -1.34
LINC01140-201ENST00000461990 A0A0U1RRA0 63 aa6.66□□□□□ -1.34
LINC01140-201ENST00000461990 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP6.66□□□□□ -1.34
LINC01140-201ENST00000461990 KLLNB2CW77 178 aa6.66□□□□□ -1.34
LINC01140-201ENST00000461990 MED13Q9UHV7 2174 aa6.66□□□□□ -1.34
LINC01140-201ENST00000461990 IGHV3-66A0A0C4DH42 116 aa6.66□□□□□ -1.34
LINC01140-201ENST00000461990 BLCAPP62952 87 aa6.66□□□□□ -1.34
LINC01140-201ENST00000461990 IL17DQ8TAD2 202 aa6.66□□□□□ -1.34
LINC01140-201ENST00000461990 DSPP15924 2871 aaKnown RBP6.66□□□□□ -1.34
LINC01140-201ENST00000461990 EP300Q09472 2414 aaPredicted RBP6.66□□□□□ -1.34
LINC01140-201ENST00000461990 CNOT1A5YKK6 2376 aaKnown RBP6.66□□□□□ -1.34
LINC01140-201ENST00000461990 F8WEM9 126 aa6.65□□□□□ -1.34
LINC01140-201ENST00000461990 A0A087WYN8 130 aa6.65□□□□□ -1.34
LINC01140-201ENST00000461990 SS18Q15532 418 aa6.65□□□□□ -1.34
LINC01140-201ENST00000461990 IGHV3-35A0A0C4DH35 117 aa6.65□□□□□ -1.35
LINC01140-201ENST00000461990 Q8N6K4 173 aa6.65□□□□□ -1.35
LINC01140-201ENST00000461990 PLAC8L1A1L4L8 177 aa6.64□□□□□ -1.35
LINC01140-201ENST00000461990 RBM3P98179 157 aaKnown RBP6.64□□□□□ -1.35
LINC01140-201ENST00000461990 C15orf32Q32M92 178 aa6.64□□□□□ -1.35
LINC01140-201ENST00000461990 ENHOQ6UWT2 76 aa6.64□□□□□ -1.35
LINC01140-201ENST00000461990 FAM19A3Q7Z5A8 133 aa6.64□□□□□ -1.35
LINC01140-201ENST00000461990 CCDC140Q96MF4 163 aa6.64□□□□□ -1.35
LINC01140-201ENST00000461990 CADP27708 2225 aa6.64□□□□□ -1.35
LINC01140-201ENST00000461990 LOC400499M0QZD8 3231 aa6.64□□□□□ -1.35
LINC01140-201ENST00000461990 ZNF292O60281 2723 aa6.64□□□□□ -1.35
LINC01140-201ENST00000461990 CD164Q04900 197 aa6.64□□□□□ -1.35
LINC01140-201ENST00000461990 Q9H8V8 135 aa6.64□□□□□ -1.35
LINC01140-201ENST00000461990 ARRDC1-AS1Q9H2J1 176 aa6.63□□□□□ -1.35
LINC01140-201ENST00000461990 NCR3O14931 201 aa6.63□□□□□ -1.35
LINC01140-201ENST00000461990 COX7A1P24310 79 aa6.63□□□□□ -1.35
LINC01140-201ENST00000461990 LINC00167Q96N53 147 aa6.63□□□□□ -1.35
LINC01140-201ENST00000461990 DPM3Q9P2X0 92 aa6.63□□□□□ -1.35
LINC01140-201ENST00000461990 CDKN2A-AS1Q9UH64 79 aa6.63□□□□□ -1.35
LINC01140-201ENST00000461990 ROS1P08922 2347 aa6.63□□□□□ -1.35
LINC01140-201ENST00000461990 JMJD7-PLA2G4BH0Y9G9 81 aa6.63□□□□□ -1.35
LINC01140-201ENST00000461990 HOXD3P31249 432 aaPredicted RBP6.63□□□□□ -1.35
LINC01140-201ENST00000461990 RMI2Q96E14 147 aa6.63□□□□□ -1.35
LINC01140-201ENST00000461990 ZZEF1O43149 2961 aa6.62□□□□□ -1.35
LINC01140-201ENST00000461990 IGHV3-16A0A0C4DH30 117 aa6.62□□□□□ -1.35
LINC01140-201ENST00000461990 IGFL2Q6UWQ7 119 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 91.5 ms