RNA–Protein interactions for RNA: ENST00000461757.1

SLC5A6-213, Transcript of solute carrier family 5 member 6, humanhuman

TSL 2

Gene SLC5A6, Length 2,307 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC5A6-213ENST00000461757 C2orf82Q6UX34 121 aa13.47□□□□□ -0.25
SLC5A6-213ENST00000461757 VSIG2Q96IQ7 327 aa13.47□□□□□ -0.25
SLC5A6-213ENST00000461757 SPTAN1Q13813 2472 aaKnown RBP13.47□□□□□ -0.25
SLC5A6-213ENST00000461757 TMEM95Q3KNT9 176 aa13.47□□□□□ -0.25
SLC5A6-213ENST00000461757 COL6A6A6NMZ7 2263 aa13.46□□□□□ -0.25
SLC5A6-213ENST00000461757 CEMP1Q6PRD7 247 aaPredicted RBP13.46□□□□□ -0.25
SLC5A6-213ENST00000461757 TINCRA0A1B0GVN0 87 aa13.46□□□□□ -0.26
SLC5A6-213ENST00000461757 IFITM1P13164 125 aa13.46□□□□□ -0.26
SLC5A6-213ENST00000461757 C15orf53Q8NAA6 179 aa13.46□□□□□ -0.26
SLC5A6-213ENST00000461757 FASNP49327 2511 aaKnown RBP13.46□□□□□ -0.26
SLC5A6-213ENST00000461757 B5MCH6 92 aa13.45□□□□□ -0.26
SLC5A6-213ENST00000461757 PIMREGQ9BSJ6 248 aa13.45□□□□□ -0.26
SLC5A6-213ENST00000461757 HIVEP3Q5T1R4 2406 aa13.45□□□□□ -0.26
SLC5A6-213ENST00000461757 C19orf84I3L1E1 186 aa13.45□□□□□ -0.26
SLC5A6-213ENST00000461757 RBMY1A1P0DJD3 496 aaKnown RBP13.45□□□□□ -0.26
SLC5A6-213ENST00000461757 RBMY1CP0DJD4 496 aa13.45□□□□□ -0.26
SLC5A6-213ENST00000461757 RBMY1FQ15415 496 aaKnown RBP13.45□□□□□ -0.26
SLC5A6-213ENST00000461757 PROK1P58294 105 aa13.44□□□□□ -0.26
SLC5A6-213ENST00000461757 RNASE13Q5GAN3 156 aaKnown RBP13.44□□□□□ -0.26
SLC5A6-213ENST00000461757 TTC32Q5I0X7 151 aa13.44□□□□□ -0.26
SLC5A6-213ENST00000461757 TMEM61Q8N0U2 210 aa13.44□□□□□ -0.26
SLC5A6-213ENST00000461757 PRRC2AP48634 2157 aaKnown RBP13.44□□□□□ -0.26
SLC5A6-213ENST00000461757 LST1O00453 97 aa13.44□□□□□ -0.26
SLC5A6-213ENST00000461757 COX6CP09669 75 aa13.44□□□□□ -0.26
SLC5A6-213ENST00000461757 Q6ZSV7 163 aa13.44□□□□□ -0.26
SLC5A6-213ENST00000461757 DEFB121Q5J5C9 76 aa13.43□□□□□ -0.26
SLC5A6-213ENST00000461757 C10orf105Q8TEF2 133 aa13.43□□□□□ -0.26
SLC5A6-213ENST00000461757 CHCHD7Q9BUK0 85 aa13.43□□□□□ -0.26
SLC5A6-213ENST00000461757 SPANXA1Q9NS26 97 aa13.43□□□□□ -0.26
SLC5A6-213ENST00000461757 IGHV3-73A0A0B4J1V6 119 aa13.42□□□□□ -0.26
SLC5A6-213ENST00000461757 TIMM17BO60830 172 aa13.42□□□□□ -0.26
SLC5A6-213ENST00000461757 PRB1P04280 392 aa13.42□□□□□ -0.26
SLC5A6-213ENST00000461757 MRPL23Q16540 153 aaKnown RBP13.42□□□□□ -0.26
SLC5A6-213ENST00000461757 ZNF843Q8N446 348 aa13.42□□□□□ -0.26
SLC5A6-213ENST00000461757 UBE2D4Q9Y2X8 147 aa13.42□□□□□ -0.26
SLC5A6-213ENST00000461757 FAM240AA0A1B0GVK7 77 aa13.42□□□□□ -0.26
SLC5A6-213ENST00000461757 GAGE12JA6NER3 117 aa13.42□□□□□ -0.26
SLC5A6-213ENST00000461757 A8MZ25 164 aa13.42□□□□□ -0.26
SLC5A6-213ENST00000461757 GAGE7O76087 117 aa13.42□□□□□ -0.26
SLC5A6-213ENST00000461757 GAGE12FP0CL80 117 aa13.42□□□□□ -0.26
SLC5A6-213ENST00000461757 GAGE12GP0CL81 117 aa13.42□□□□□ -0.26
SLC5A6-213ENST00000461757 GAGE12IP0CL82 117 aa13.42□□□□□ -0.26
SLC5A6-213ENST00000461757 GAGE4Q13068 117 aa13.42□□□□□ -0.26
SLC5A6-213ENST00000461757 CLEC2BQ92478 149 aa13.42□□□□□ -0.26
SLC5A6-213ENST00000461757 YAE1D1Q9NRH1 226 aa13.42□□□□□ -0.26
SLC5A6-213ENST00000461757 C10orf99Q6UWK7 81 aa13.41□□□□□ -0.26
SLC5A6-213ENST00000461757 TNFRSF18Q9Y5U5 241 aa13.41□□□□□ -0.26
SLC5A6-213ENST00000461757 CCDC179H3BU77 68 aa13.41□□□□□ -0.26
SLC5A6-213ENST00000461757 DOPEY2Q9Y3R5 2298 aa13.4□□□□□ -0.26
SLC5A6-213ENST00000461757 PLA2G2AP14555 144 aa13.4□□□□□ -0.26
SLC5A6-213ENST00000461757 NPC2P61916 151 aa13.4□□□□□ -0.26
SLC5A6-213ENST00000461757 Q9UF83 564 aa13.4□□□□□ -0.26
SLC5A6-213ENST00000461757 TMEM89A2RUT3 159 aa13.39□□□□□ -0.27
SLC5A6-213ENST00000461757 MSMBP08118 114 aa13.38□□□□□ -0.27
SLC5A6-213ENST00000461757 SYNJ2BPP57105 145 aa13.38□□□□□ -0.27
SLC5A6-213ENST00000461757 Q6ZSN1 163 aa13.38□□□□□ -0.27
SLC5A6-213ENST00000461757 AVPP01185 164 aa13.37□□□□□ -0.27
SLC5A6-213ENST00000461757 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.36□□□□□ -0.27
SLC5A6-213ENST00000461757 IGKV2-29A2NJV5 120 aaPredicted RBP13.36□□□□□ -0.27
SLC5A6-213ENST00000461757 NDUFA1O15239 70 aa13.36□□□□□ -0.27
SLC5A6-213ENST00000461757 PIK3CD-AS1Q5SR53 167 aa13.36□□□□□ -0.27
SLC5A6-213ENST00000461757 LINC00467Q9BRT7 94 aa13.36□□□□□ -0.27
SLC5A6-213ENST00000461757 IGLV5-45A0A087WSX0 123 aa13.36□□□□□ -0.27
SLC5A6-213ENST00000461757 KNCNA6PVL3 124 aa13.36□□□□□ -0.27
SLC5A6-213ENST00000461757 VPS13CQ709C8 3753 aa13.36□□□□□ -0.27
SLC5A6-213ENST00000461757 IGHV4-30-2A0A087WSY4 118 aa13.35□□□□□ -0.27
SLC5A6-213ENST00000461757 A8MTW9 85 aa13.35□□□□□ -0.27
SLC5A6-213ENST00000461757 HTN1P15515 57 aa13.35□□□□□ -0.27
SLC5A6-213ENST00000461757 DUX3Q96PT4 197 aa13.35□□□□□ -0.27
SLC5A6-213ENST00000461757 NACAE9PAV3 2078 aa13.35□□□□□ -0.27
SLC5A6-213ENST00000461757 CITED2Q99967 270 aaPredicted RBP13.34□□□□□ -0.27
SLC5A6-213ENST00000461757 CDKN2A-AS1Q9UH64 79 aa13.34□□□□□ -0.27
SLC5A6-213ENST00000461757 IGHV4-59P01825 116 aa13.34□□□□□ -0.27
SLC5A6-213ENST00000461757 TIRAPP58753 221 aa13.34□□□□□ -0.27
SLC5A6-213ENST00000461757 DAND5Q8N907 189 aa13.34□□□□□ -0.27
SLC5A6-213ENST00000461757 J3QKU1 62 aa13.33□□□□□ -0.28
SLC5A6-213ENST00000461757 CCL19Q99731 98 aa13.33□□□□□ -0.28
SLC5A6-213ENST00000461757 TRBV7-7A0A0K0K1E9 115 aa13.33□□□□□ -0.28
SLC5A6-213ENST00000461757 RBMY1BA6NDE4 496 aaKnown RBP13.33□□□□□ -0.28
SLC5A6-213ENST00000461757 RBMY1EA6NEQ0 496 aaKnown RBP13.33□□□□□ -0.28
SLC5A6-213ENST00000461757 PRM2P04554 102 aa13.33□□□□□ -0.28
SLC5A6-213ENST00000461757 RBMY1DP0C7P1 496 aaKnown RBP13.33□□□□□ -0.28
SLC5A6-213ENST00000461757 TMEM101Q96IK0 257 aa13.33□□□□□ -0.28
SLC5A6-213ENST00000461757 DUX5Q96PT3 197 aa13.33□□□□□ -0.28
SLC5A6-213ENST00000461757 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.32□□□□□ -0.28
SLC5A6-213ENST00000461757 HOXD3P31249 432 aaPredicted RBP13.31□□□□□ -0.28
SLC5A6-213ENST00000461757 ZNF415Q09FC8 603 aa13.31□□□□□ -0.28
SLC5A6-213ENST00000461757 DNAJC30Q96LL9 226 aa13.31□□□□□ -0.28
SLC5A6-213ENST00000461757 IGHV3-53P01767 116 aa13.3□□□□□ -0.28
SLC5A6-213ENST00000461757 GCN1Q92616 2671 aaKnown RBP13.3□□□□□ -0.28
SLC5A6-213ENST00000461757 COL12A1Q99715 3063 aa13.3□□□□□ -0.28
SLC5A6-213ENST00000461757 IGLV5-39A0A0G2JS06 123 aa13.3□□□□□ -0.28
SLC5A6-213ENST00000461757 LY6DQ14210 128 aa13.3□□□□□ -0.28
SLC5A6-213ENST00000461757 DEFB112Q30KQ8 113 aa13.3□□□□□ -0.28
SLC5A6-213ENST00000461757 LINC00308Q8TCZ7 52 aa13.3□□□□□ -0.28
SLC5A6-213ENST00000461757 IGHV3-38A0A0C4DH36 116 aa13.29□□□□□ -0.28
SLC5A6-213ENST00000461757 DEFB131AP59861 70 aa13.29□□□□□ -0.28
SLC5A6-213ENST00000461757 SORL1Q92673 2214 aa13.29□□□□□ -0.28
SLC5A6-213ENST00000461757 ATP5J2P56134 94 aa13.29□□□□□ -0.28
SLC5A6-213ENST00000461757 CIRBPQ14011 172 aaKnown RBP13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms