RNA–Protein interactions for RNA: ENST00000461533.1

ITGA9-204, Transcript of integrin subunit alpha 9, humanhuman

TSL 3

Gene ITGA9, Length 428 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA9-204ENST00000461533 REG3AQ06141 175 aa5.14□□□□□ -1.59
ITGA9-204ENST00000461533 COTL1Q14019 142 aa5.14□□□□□ -1.59
ITGA9-204ENST00000461533 TWIST1Q15672 202 aa5.14□□□□□ -1.59
ITGA9-204ENST00000461533 C9orf163Q8N9P6 203 aa5.14□□□□□ -1.59
ITGA9-204ENST00000461533 C20orf203Q8NBC4 194 aa5.14□□□□□ -1.59
ITGA9-204ENST00000461533 CLRN3Q8NCR9 226 aa5.14□□□□□ -1.59
ITGA9-204ENST00000461533 CIRBP-AS1Q8TBR5 109 aa5.14□□□□□ -1.59
ITGA9-204ENST00000461533 DEFB104AQ8WTQ1 72 aa5.14□□□□□ -1.59
ITGA9-204ENST00000461533 RNASE7Q9H1E1 156 aaKnown RBP5.14□□□□□ -1.59
ITGA9-204ENST00000461533 FOXA3P55318 350 aaPredicted RBP5.13□□□□□ -1.59
ITGA9-204ENST00000461533 CT83Q5H943 113 aa5.13□□□□□ -1.59
ITGA9-204ENST00000461533 TEX261Q6UWH6 196 aa5.13□□□□□ -1.59
ITGA9-204ENST00000461533 FAM231DQ6ZW35 169 aa5.13□□□□□ -1.59
ITGA9-204ENST00000461533 SMIM15Q7Z3B0 74 aa5.13□□□□□ -1.59
ITGA9-204ENST00000461533 GATD1Q8NB37 220 aa5.13□□□□□ -1.59
ITGA9-204ENST00000461533 GTSF1Q8WW33 167 aa5.13□□□□□ -1.59
ITGA9-204ENST00000461533 IGLV4-60A0A075B6I1 120 aa5.12□□□□□ -1.59
ITGA9-204ENST00000461533 A0A1B0GVG6 124 aa5.12□□□□□ -1.59
ITGA9-204ENST00000461533 A8MWL6 223 aa5.12□□□□□ -1.59
ITGA9-204ENST00000461533 KRTAP29-1A8MX34 341 aaPredicted RBP5.12□□□□□ -1.59
ITGA9-204ENST00000461533 H7C423 109 aa5.12□□□□□ -1.59
ITGA9-204ENST00000461533 UBE2L6O14933 153 aa5.12□□□□□ -1.59
ITGA9-204ENST00000461533 NCR2O95944 276 aa5.12□□□□□ -1.59
ITGA9-204ENST00000461533 AMTP48728 403 aa5.12□□□□□ -1.59
ITGA9-204ENST00000461533 KRTAP10-4P60372 401 aaPredicted RBP5.12□□□□□ -1.59
ITGA9-204ENST00000461533 CNBPP62633 177 aaKnown RBP5.12□□□□□ -1.59
ITGA9-204ENST00000461533 CLPSL2Q6UWE3 100 aa5.12□□□□□ -1.59
ITGA9-204ENST00000461533 ALKAL2Q6UX46 152 aa5.12□□□□□ -1.59
ITGA9-204ENST00000461533 HMCN2Q8NDA2 5059 aa5.11□□□□□ -1.59
ITGA9-204ENST00000461533 TRBV6-5A0A0K0K1A5 114 aa5.11□□□□□ -1.59
ITGA9-204ENST00000461533 FAM231BA6NCW3 169 aa5.11□□□□□ -1.59
ITGA9-204ENST00000461533 GATCO43716 136 aaKnown RBP5.11□□□□□ -1.59
ITGA9-204ENST00000461533 SDIM1Q6ZPB5 146 aa5.11□□□□□ -1.59
ITGA9-204ENST00000461533 GFRA4Q9GZZ7 299 aa5.11□□□□□ -1.59
ITGA9-204ENST00000461533 IGLV10-54A0A075B6I4 117 aa5.1□□□□□ -1.59
ITGA9-204ENST00000461533 TRAV26-2A0A0B4J265 109 aa5.1□□□□□ -1.59
ITGA9-204ENST00000461533 J3QL48 77 aa5.1□□□□□ -1.59
ITGA9-204ENST00000461533 CIRBPQ14011 172 aaKnown RBP5.1□□□□□ -1.59
ITGA9-204ENST00000461533 SMIM7Q9BQ49 75 aa5.1□□□□□ -1.59
ITGA9-204ENST00000461533 hCG_2014768A0A024R1R8 64 aa5.09□□□□□ -1.59
ITGA9-204ENST00000461533 A0A1B0GUT8 65 aa5.09□□□□□ -1.59
ITGA9-204ENST00000461533 hDV102S1A0JD36 115 aa5.09□□□□□ -1.59
ITGA9-204ENST00000461533 SDHAF1A6NFY7 115 aa5.09□□□□□ -1.59
ITGA9-204ENST00000461533 APCSP02743 223 aa5.09□□□□□ -1.59
ITGA9-204ENST00000461533 AMMECR1LQ6DCA0 310 aa5.09□□□□□ -1.59
ITGA9-204ENST00000461533 CFAP161Q6P656 301 aa5.09□□□□□ -1.59
ITGA9-204ENST00000461533 LINC01551Q86U37 167 aa5.09□□□□□ -1.59
ITGA9-204ENST00000461533 TSKUQ8WUA8 353 aa5.09□□□□□ -1.59
ITGA9-204ENST00000461533 BORCS7Q96B45 105 aa5.09□□□□□ -1.59
ITGA9-204ENST00000461533 RPL39LQ96EH5 51 aaKnown RBP5.09□□□□□ -1.59
ITGA9-204ENST00000461533 OSTCQ9NRP0 149 aa5.09□□□□□ -1.59
ITGA9-204ENST00000461533 AP5S1Q9NUS5 200 aa5.09□□□□□ -1.59
ITGA9-204ENST00000461533 IGHV3-64A0A075B6Q5 118 aa5.08□□□□□ -1.6
ITGA9-204ENST00000461533 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.08□□□□□ -1.6
ITGA9-204ENST00000461533 HIGD1CA8MV81 97 aa5.08□□□□□ -1.6
ITGA9-204ENST00000461533 I3L3M4 83 aa5.08□□□□□ -1.6
ITGA9-204ENST00000461533 OXTP01178 125 aa5.08□□□□□ -1.6
ITGA9-204ENST00000461533 ZNF25P17030 456 aaPredicted RBP5.08□□□□□ -1.6
ITGA9-204ENST00000461533 C15orf56Q8N910 161 aa5.08□□□□□ -1.6
ITGA9-204ENST00000461533 RNF185Q96GF1 192 aa5.08□□□□□ -1.6
ITGA9-204ENST00000461533 EIF5A2Q9GZV4 153 aaKnown RBP5.08□□□□□ -1.6
ITGA9-204ENST00000461533 TMEM191AQ9H0A3 160 aa5.08□□□□□ -1.6
ITGA9-204ENST00000461533 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.08□□□□□ -1.6
ITGA9-204ENST00000461533 GAGE12HA6NDE8 117 aa5.07□□□□□ -1.6
ITGA9-204ENST00000461533 ZNF727A8MUV8 499 aa5.07□□□□□ -1.6
ITGA9-204ENST00000461533 PANO1I0J062 215 aa5.07□□□□□ -1.6
ITGA9-204ENST00000461533 SLPIP03973 132 aa5.07□□□□□ -1.6
ITGA9-204ENST00000461533 SRP19P09132 144 aaKnown RBP5.07□□□□□ -1.6
ITGA9-204ENST00000461533 FGF6P10767 208 aa5.07□□□□□ -1.6
ITGA9-204ENST00000461533 ESDP10768 282 aa5.07□□□□□ -1.6
ITGA9-204ENST00000461533 PMCHP20382 165 aa5.07□□□□□ -1.6
ITGA9-204ENST00000461533 CEBPGP53567 150 aa5.07□□□□□ -1.6
ITGA9-204ENST00000461533 RPL37AP61513 92 aaKnown RBP5.07□□□□□ -1.6
ITGA9-204ENST00000461533 FAM74A3Q4VXF1 159 aa5.07□□□□□ -1.6
ITGA9-204ENST00000461533 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.06□□□□□ -1.6
ITGA9-204ENST00000461533 TRBV27A0A0K0K1C4 114 aa5.06□□□□□ -1.6
ITGA9-204ENST00000461533 IGKV2-29A2NJV5 120 aaPredicted RBP5.06□□□□□ -1.6
ITGA9-204ENST00000461533 PPP1R17O96001 155 aa5.06□□□□□ -1.6
ITGA9-204ENST00000461533 TSHBP01222 138 aa5.06□□□□□ -1.6
ITGA9-204ENST00000461533 RAB4AP20338 218 aa5.06□□□□□ -1.6
ITGA9-204ENST00000461533 POLR2KP53803 58 aaKnown RBP5.06□□□□□ -1.6
ITGA9-204ENST00000461533 RNASEKQ6P5S7 137 aaKnown RBP5.06□□□□□ -1.6
ITGA9-204ENST00000461533 MRPL52Q86TS9 123 aaKnown RBP5.06□□□□□ -1.6
ITGA9-204ENST00000461533 OR5A1Q8NGJ0 315 aa5.06□□□□□ -1.6
ITGA9-204ENST00000461533 CHCHD10Q8WYQ3 142 aaPredicted RBP5.06□□□□□ -1.6
ITGA9-204ENST00000461533 MRAP2Q96G30 205 aa5.06□□□□□ -1.6
ITGA9-204ENST00000461533 TMEM101Q96IK0 257 aa5.06□□□□□ -1.6
ITGA9-204ENST00000461533 ST20Q9HBF5 79 aa5.06□□□□□ -1.6
ITGA9-204ENST00000461533 GVQW2A0A096LPI5 108 aaPredicted RBP5.05□□□□□ -1.6
ITGA9-204ENST00000461533 GAS8-AS1O95177 125 aa5.05□□□□□ -1.6
ITGA9-204ENST00000461533 RPS10P46783 165 aaKnown RBP5.05□□□□□ -1.6
ITGA9-204ENST00000461533 RIGQ13278 110 aa5.05□□□□□ -1.6
ITGA9-204ENST00000461533 TMEM241Q24JQ0 296 aa5.05□□□□□ -1.6
ITGA9-204ENST00000461533 SPACA4Q8TDM5 124 aa5.05□□□□□ -1.6
ITGA9-204ENST00000461533 BTF3L4Q96K17 158 aa5.05□□□□□ -1.6
ITGA9-204ENST00000461533 SMDT1Q9H4I9 107 aa5.05□□□□□ -1.6
ITGA9-204ENST00000461533 V9GYV3 84 aa5.05□□□□□ -1.6
ITGA9-204ENST00000461533 TNXBP22105 4242 aa5.04□□□□□ -1.6
ITGA9-204ENST00000461533 A0A087WYN8 130 aa5.04□□□□□ -1.6
ITGA9-204ENST00000461533 IGKV3OR2-268A0A0C4DH90 116 aa5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms