RNA–Protein interactions for RNA: ENST00000461507.5

FDPS-204, Transcript of farnesyl diphosphate synthase, human

TSL 2

Gene FDPS, Length 1,022 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FDPS-204	ENST00000461507	TMEM243	Q9BU79	118 aa		8.52	□□□□□ -1.05
FDPS-204	ENST00000461507	FAT1	Q14517	4588 aa		8.51	□□□□□ -1.05
FDPS-204	ENST00000461507	IGKV2D-24	A0A075B6R9	120 aa		8.51	□□□□□ -1.05
FDPS-204	ENST00000461507	TRAV8-3	A0A0A6YYJ7	113 aa		8.51	□□□□□ -1.05
FDPS-204	ENST00000461507	SDHAF1	A6NFY7	115 aa		8.51	□□□□□ -1.05
FDPS-204	ENST00000461507	S100A8	P05109	93 aa		8.51	□□□□□ -1.05
FDPS-204	ENST00000461507	PMCH	P20382	165 aa		8.51	□□□□□ -1.05
FDPS-204	ENST00000461507	HBB	P68871	147 aa		8.51	□□□□□ -1.05
FDPS-204	ENST00000461507	LAGE3	Q14657	143 aa		8.51	□□□□□ -1.05
FDPS-204	ENST00000461507		Q8N976	141 aa		8.51	□□□□□ -1.05
FDPS-204	ENST00000461507	ANAPC16	Q96DE5	110 aa		8.51	□□□□□ -1.05
FDPS-204	ENST00000461507	RMI2	Q96E14	147 aa		8.51	□□□□□ -1.05
FDPS-204	ENST00000461507	MRAP2	Q96G30	205 aa		8.51	□□□□□ -1.05
FDPS-204	ENST00000461507	CHCHD7	Q9BUK0	85 aa		8.51	□□□□□ -1.05
FDPS-204	ENST00000461507	TM2D2	Q9BX73	214 aa		8.51	□□□□□ -1.05
FDPS-204	ENST00000461507	ST20	Q9HBF5	79 aa		8.51	□□□□□ -1.05
FDPS-204	ENST00000461507	TMEM218	A2RU14	115 aa		8.5	□□□□□ -1.05
FDPS-204	ENST00000461507	APCS	P02743	223 aa		8.5	□□□□□ -1.05
FDPS-204	ENST00000461507	RAB4A	P20338	218 aa		8.5	□□□□□ -1.05
FDPS-204	ENST00000461507	ATRAID	Q6UW56	229 aa		8.5	□□□□□ -1.05
FDPS-204	ENST00000461507	FRZB	Q92765	325 aa		8.5	□□□□□ -1.05
FDPS-204	ENST00000461507		A0A1B0GW15	77 aa		8.49	□□□□□ -1.05
FDPS-204	ENST00000461507	GAS8-AS1	O95177	125 aa		8.49	□□□□□ -1.05
FDPS-204	ENST00000461507	IQCJ	Q1A5X6	159 aa		8.49	□□□□□ -1.05
FDPS-204	ENST00000461507	AMMECR1L	Q6DCA0	310 aa		8.49	□□□□□ -1.05
FDPS-204	ENST00000461507	RNF185	Q96GF1	192 aa		8.49	□□□□□ -1.05
FDPS-204	ENST00000461507		I3L3M4	83 aa		8.48	□□□□□ -1.05
FDPS-204	ENST00000461507	ADCYAP1	P18509	176 aa		8.48	□□□□□ -1.05
FDPS-204	ENST00000461507	FUS	P35637	526 aa	Known RBP eCLIP	8.48	□□□□□ -1.05	8e-9	■■□□□ 13.1
FDPS-204	ENST00000461507	RPS10	P46783	165 aa	Known RBP	8.48	□□□□□ -1.05
FDPS-204	ENST00000461507	XG	P55808	180 aa		8.48	□□□□□ -1.05
FDPS-204	ENST00000461507	RBX1	P62877	108 aa		8.48	□□□□□ -1.05
FDPS-204	ENST00000461507	TMEM242	Q9NWH2	141 aa		8.48	□□□□□ -1.05
FDPS-204	ENST00000461507	DNAH8	Q96JB1	4490 aa		8.47	□□□□□ -1.05
FDPS-204	ENST00000461507	IGKV2D-29	A0A075B6S2	120 aa	Predicted RBP	8.47	□□□□□ -1.05
FDPS-204	ENST00000461507	IGKV2-29	A2NJV5	120 aa	Predicted RBP	8.47	□□□□□ -1.05
FDPS-204	ENST00000461507	LECT2	O14960	151 aa		8.47	□□□□□ -1.05
FDPS-204	ENST00000461507	FCER1G	P30273	86 aa		8.47	□□□□□ -1.05
FDPS-204	ENST00000461507	CKS2	P33552	79 aa		8.47	□□□□□ -1.05
FDPS-204	ENST00000461507	KRTAP10-1	P60331	282 aa		8.47	□□□□□ -1.05
FDPS-204	ENST00000461507		Q0VG73	95 aa		8.47	□□□□□ -1.05
FDPS-204	ENST00000461507	MRPL51	Q4U2R6	128 aa	Known RBP	8.47	□□□□□ -1.05
FDPS-204	ENST00000461507	FAM104B	Q5XKR9	115 aa		8.47	□□□□□ -1.05
FDPS-204	ENST00000461507	RNASEK	Q6P5S7	137 aa	Known RBP	8.47	□□□□□ -1.05
FDPS-204	ENST00000461507	C1orf43	Q9BWL3	253 aa		8.47	□□□□□ -1.05
FDPS-204	ENST00000461507	IGKV3OR2-268	A0A0C4DH90	116 aa		8.46	□□□□□ -1.06
FDPS-204	ENST00000461507	LRCOL1	A6NCL2	159 aa		8.46	□□□□□ -1.06
FDPS-204	ENST00000461507	PPP1R17	O96001	155 aa		8.46	□□□□□ -1.06
FDPS-204	ENST00000461507	HLA-DQA1	P01909	254 aa		8.46	□□□□□ -1.06
FDPS-204	ENST00000461507	LINC00269	Q8N2A0	174 aa		8.46	□□□□□ -1.06
FDPS-204	ENST00000461507	TMEM70	Q9BUB7	260 aa		8.46	□□□□□ -1.06
FDPS-204	ENST00000461507	COX11	Q9Y6N1	276 aa		8.46	□□□□□ -1.06
FDPS-204	ENST00000461507	VPS13B	Q7Z7G8	4022 aa		8.45	□□□□□ -1.06
FDPS-204	ENST00000461507	TRBV6-5	A0A0K0K1A5	114 aa		8.45	□□□□□ -1.06
FDPS-204	ENST00000461507	ATP5L2	Q7Z4Y8	100 aa		8.45	□□□□□ -1.06
FDPS-204	ENST00000461507	NTN5	Q8WTR8	489 aa	Predicted RBP	8.45	□□□□□ -1.06
FDPS-204	ENST00000461507	SEC11C	Q9BY50	192 aa		8.45	□□□□□ -1.06
FDPS-204	ENST00000461507	IGLV10-54	A0A075B6I4	117 aa		8.44	□□□□□ -1.06
FDPS-204	ENST00000461507		A0A1B0GXF2	115 aa		8.44	□□□□□ -1.06
FDPS-204	ENST00000461507	LINC00862	A6NCI5	91 aa		8.44	□□□□□ -1.06
FDPS-204	ENST00000461507	EPM2A	B3EWF7	344 aa		8.44	□□□□□ -1.06
FDPS-204	ENST00000461507		D6R8Y8	96 aa		8.44	□□□□□ -1.06
FDPS-204	ENST00000461507	S100P	P25815	95 aa		8.44	□□□□□ -1.06
FDPS-204	ENST00000461507	SUMO2	P61956	95 aa	Known RBP	8.44	□□□□□ -1.06
FDPS-204	ENST00000461507	BAALC	Q8WXS3	180 aa		8.44	□□□□□ -1.06
FDPS-204	ENST00000461507	BTF3L4	Q96K17	158 aa		8.44	□□□□□ -1.06
FDPS-204	ENST00000461507	KIR2DL4	Q99706	377 aa		8.44	□□□□□ -1.06
FDPS-204	ENST00000461507	IGLV4-60	A0A075B6I1	120 aa		8.43	□□□□□ -1.06
FDPS-204	ENST00000461507	IGLV2-33	A0A075B6J2	118 aa	Predicted RBP	8.43	□□□□□ -1.06
FDPS-204	ENST00000461507	VCY	O14598	125 aa		8.43	□□□□□ -1.06
FDPS-204	ENST00000461507	REG3A	Q06141	175 aa		8.43	□□□□□ -1.06
FDPS-204	ENST00000461507	MIA	Q16674	131 aa		8.43	□□□□□ -1.06
FDPS-204	ENST00000461507	ENHO	Q6UWT2	76 aa		8.43	□□□□□ -1.06
FDPS-204	ENST00000461507	NRAC	Q8N912	160 aa		8.43	□□□□□ -1.06
FDPS-204	ENST00000461507	TMEM101	Q96IK0	257 aa		8.43	□□□□□ -1.06
FDPS-204	ENST00000461507	IGLV5-52	A0A0A0MRZ9	124 aa		8.42	□□□□□ -1.06
FDPS-204	ENST00000461507	C7orf77	A4D0Y5	90 aa		8.42	□□□□□ -1.06
FDPS-204	ENST00000461507	TNFRSF6B	O95407	300 aa		8.42	□□□□□ -1.06
FDPS-204	ENST00000461507	TSHB	P01222	138 aa		8.42	□□□□□ -1.06
FDPS-204	ENST00000461507	FGF6	P10767	208 aa		8.42	□□□□□ -1.06
FDPS-204	ENST00000461507	GCSH	P23434	173 aa		8.42	□□□□□ -1.06
FDPS-204	ENST00000461507		Q8N814	137 aa		8.42	□□□□□ -1.06
FDPS-204	ENST00000461507	C20orf203	Q8NBC4	194 aa		8.42	□□□□□ -1.06
FDPS-204	ENST00000461507	CTDSP1	Q9GZU7	261 aa		8.42	□□□□□ -1.06
FDPS-204	ENST00000461507	RPS10P5	Q9NQ39	176 aa		8.42	□□□□□ -1.06
FDPS-204	ENST00000461507	DMBT1	Q9UGM3	2413 aa	Predicted RBP	8.42	□□□□□ -1.06
FDPS-204	ENST00000461507	WFDC2	Q14508	124 aa		8.41	□□□□□ -1.06
FDPS-204	ENST00000461507	NDUFA5	Q16718	116 aa		8.41	□□□□□ -1.06
FDPS-204	ENST00000461507	ORMDL3	Q8N138	153 aa		8.41	□□□□□ -1.06
FDPS-204	ENST00000461507	HERC1	Q15751	4861 aa		8.4	□□□□□ -1.06
FDPS-204	ENST00000461507	TRBV27	A0A0K0K1C4	114 aa		8.4	□□□□□ -1.06
FDPS-204	ENST00000461507	NPY	P01303	97 aa		8.4	□□□□□ -1.06
FDPS-204	ENST00000461507	APOC3	P02656	99 aa		8.4	□□□□□ -1.06
FDPS-204	ENST00000461507	PPBP	P02775	128 aa		8.4	□□□□□ -1.06
FDPS-204	ENST00000461507	POLR2K	P53803	58 aa	Known RBP	8.4	□□□□□ -1.06
FDPS-204	ENST00000461507		Q5VSD8	79 aa		8.4	□□□□□ -1.06
FDPS-204	ENST00000461507	DGAT2L7P	Q6IED9	249 aa		8.4	□□□□□ -1.06
FDPS-204	ENST00000461507	TMEM136	Q6ZRR5	245 aa		8.4	□□□□□ -1.06
FDPS-204	ENST00000461507	OR5A1	Q8NGJ0	315 aa		8.4	□□□□□ -1.06
FDPS-204	ENST00000461507	PRELID3A	Q96N28	172 aa		8.4	□□□□□ -1.06

Retrieved 100 of 20,778 RNA–protein pairs in 83.8 ms