RNA–Protein interactions for RNA: ENST00000461214.1

COL5A3-202, Transcript of collagen type V alpha 3 chain, humanhuman

TSL 3

Gene COL5A3, Length 828 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A3-202ENST00000461214 ESRGQ1W209 222 aa9.91□□□□□ -0.82
COL5A3-202ENST00000461214 LGALS9CQ6DKI2 356 aa9.91□□□□□ -0.82
COL5A3-202ENST00000461214 UBE2DNLQ8IWF7 75 aa9.91□□□□□ -0.82
COL5A3-202ENST00000461214 KIR2DL4Q99706 377 aa9.91□□□□□ -0.82
COL5A3-202ENST00000461214 ABCA13Q86UQ4 5058 aa9.9□□□□□ -0.82
COL5A3-202ENST00000461214 TRBV25-1A0A075B6N4 114 aa9.9□□□□□ -0.82
COL5A3-202ENST00000461214 TRBV6-8A0A0A6YYG3 113 aa9.9□□□□□ -0.82
COL5A3-202ENST00000461214 IGHV3-38A0A0C4DH36 116 aa9.9□□□□□ -0.82
COL5A3-202ENST00000461214 K7EMI3 77 aa9.9□□□□□ -0.82
COL5A3-202ENST00000461214 NXT2Q9NPJ8 142 aaKnown RBP9.9□□□□□ -0.82
COL5A3-202ENST00000461214 LINC00588Q9Y4M8 146 aa9.9□□□□□ -0.82
COL5A3-202ENST00000461214 TRAV8-6A0A0B4J262 113 aa9.89□□□□□ -0.83
COL5A3-202ENST00000461214 IGHV1-24A0A0C4DH33 117 aa9.89□□□□□ -0.83
COL5A3-202ENST00000461214 TRGC2P03986 189 aa9.89□□□□□ -0.83
COL5A3-202ENST00000461214 IQCJQ1A5X6 159 aa9.89□□□□□ -0.83
COL5A3-202ENST00000461214 KMT2AQ03164 3969 aa9.89□□□□□ -0.83
COL5A3-202ENST00000461214 TSHBP01222 138 aa9.88□□□□□ -0.83
COL5A3-202ENST00000461214 AMTP48728 403 aa9.88□□□□□ -0.83
COL5A3-202ENST00000461214 PKIAP61925 76 aa9.88□□□□□ -0.83
COL5A3-202ENST00000461214 Q8N8P6 123 aa9.88□□□□□ -0.83
COL5A3-202ENST00000461214 IGLV2-18A0A075B6J9 118 aa9.87□□□□□ -0.83
COL5A3-202ENST00000461214 FCER1GP30273 86 aa9.87□□□□□ -0.83
COL5A3-202ENST00000461214 NTM-AS1Q6ZSK4 140 aa9.87□□□□□ -0.83
COL5A3-202ENST00000461214 C18orf32Q8TCD1 76 aa9.87□□□□□ -0.83
COL5A3-202ENST00000461214 H7C423 109 aa9.86□□□□□ -0.83
COL5A3-202ENST00000461214 TMEM243Q9BU79 118 aa9.86□□□□□ -0.83
COL5A3-202ENST00000461214 CHCHD7Q9BUK0 85 aa9.86□□□□□ -0.83
COL5A3-202ENST00000461214 DNAH10Q8IVF4 4471 aa9.86□□□□□ -0.83
COL5A3-202ENST00000461214 LOC389332A0A1B0GUA5 103 aa9.84□□□□□ -0.83
COL5A3-202ENST00000461214 LINC01546A6NGU7 62 aa9.84□□□□□ -0.83
COL5A3-202ENST00000461214 K7EP13 123 aa9.84□□□□□ -0.83
COL5A3-202ENST00000461214 SIVA1O15304 175 aa9.84□□□□□ -0.83
COL5A3-202ENST00000461214 ESDP10768 282 aa9.84□□□□□ -0.83
COL5A3-202ENST00000461214 IFI27P40305 119 aaPredicted RBP9.84□□□□□ -0.83
COL5A3-202ENST00000461214 ORMDL2Q53FV1 153 aa9.84□□□□□ -0.83
COL5A3-202ENST00000461214 WFDC10BQ8IUB3 73 aa9.84□□□□□ -0.83
COL5A3-202ENST00000461214 PRSS3P2Q8NHM4 247 aa9.84□□□□□ -0.83
COL5A3-202ENST00000461214 KRTAP4-5Q9BYR2 181 aa9.84□□□□□ -0.83
COL5A3-202ENST00000461214 UBE2L6O14933 153 aa9.83□□□□□ -0.84
COL5A3-202ENST00000461214 DNAH10OSP0CZ25 163 aa9.83□□□□□ -0.84
COL5A3-202ENST00000461214 RAB5BP61020 215 aa9.83□□□□□ -0.84
COL5A3-202ENST00000461214 SMAGPQ0VAQ4 97 aa9.83□□□□□ -0.84
COL5A3-202ENST00000461214 LINC01556Q5JQF7 62 aa9.83□□□□□ -0.84
COL5A3-202ENST00000461214 FA2HQ7L5A8 372 aa9.83□□□□□ -0.84
COL5A3-202ENST00000461214 TMEM18Q96B42 140 aa9.83□□□□□ -0.84
COL5A3-202ENST00000461214 CHCHD5Q9BSY4 110 aa9.83□□□□□ -0.84
COL5A3-202ENST00000461214 G0S2P27469 103 aa9.82□□□□□ -0.84
COL5A3-202ENST00000461214 Q0VG73 95 aa9.82□□□□□ -0.84
COL5A3-202ENST00000461214 LAGE3Q14657 143 aa9.82□□□□□ -0.84
COL5A3-202ENST00000461214 NIT1Q86X76 327 aa9.82□□□□□ -0.84
COL5A3-202ENST00000461214 AP5S1Q9NUS5 200 aa9.82□□□□□ -0.84
COL5A3-202ENST00000461214 LINC01549A6NIU2 74 aa9.81□□□□□ -0.84
COL5A3-202ENST00000461214 ZNF25P17030 456 aaPredicted RBP9.81□□□□□ -0.84
COL5A3-202ENST00000461214 TTC32Q5I0X7 151 aa9.81□□□□□ -0.84
COL5A3-202ENST00000461214 C20orf203Q8NBC4 194 aa9.81□□□□□ -0.84
COL5A3-202ENST00000461214 Q9H8V8 135 aa9.81□□□□□ -0.84
COL5A3-202ENST00000461214 A0A087WX48 190 aa9.8□□□□□ -0.84
COL5A3-202ENST00000461214 C1orf196B1AJZ1 125 aa9.8□□□□□ -0.84
COL5A3-202ENST00000461214 HIST1H2BKO60814 126 aa9.8□□□□□ -0.84
COL5A3-202ENST00000461214 HIST1H2BJP06899 126 aa9.8□□□□□ -0.84
COL5A3-202ENST00000461214 HIST1H2BOP23527 126 aa9.8□□□□□ -0.84
COL5A3-202ENST00000461214 HIST1H2BBP33778 126 aa9.8□□□□□ -0.84
COL5A3-202ENST00000461214 HIST1H2BDP58876 126 aa9.8□□□□□ -0.84
COL5A3-202ENST00000461214 HIST1H2BCP62807 126 aa9.8□□□□□ -0.84
COL5A3-202ENST00000461214 HIST2H2BEQ16778 126 aa9.8□□□□□ -0.84
COL5A3-202ENST00000461214 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.8□□□□□ -0.84
COL5A3-202ENST00000461214 MRPL52Q86TS9 123 aaKnown RBP9.8□□□□□ -0.84
COL5A3-202ENST00000461214 C10orf126Q8N4M7 172 aa9.8□□□□□ -0.84
COL5A3-202ENST00000461214 DEFB104AQ8WTQ1 72 aa9.8□□□□□ -0.84
COL5A3-202ENST00000461214 HIST1H2BHQ93079 126 aa9.8□□□□□ -0.84
COL5A3-202ENST00000461214 CHCHD1Q96BP2 118 aaKnown RBP9.8□□□□□ -0.84
COL5A3-202ENST00000461214 HIST1H2BNQ99877 126 aa9.8□□□□□ -0.84
COL5A3-202ENST00000461214 HIST1H2BMQ99879 126 aa9.8□□□□□ -0.84
COL5A3-202ENST00000461214 TIMM21Q9BVV7 248 aa9.8□□□□□ -0.84
COL5A3-202ENST00000461214 A0A1B0GUV1 79 aa9.79□□□□□ -0.84
COL5A3-202ENST00000461214 LINC00614P0C842 121 aa9.79□□□□□ -0.84
COL5A3-202ENST00000461214 MPV17L2Q567V2 206 aa9.79□□□□□ -0.84
COL5A3-202ENST00000461214 CYSLTR1Q9Y271 337 aa9.79□□□□□ -0.84
COL5A3-202ENST00000461214 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.78□□□□□ -0.84
COL5A3-202ENST00000461214 TRAV9-2A0A087WT02 112 aa9.78□□□□□ -0.84
COL5A3-202ENST00000461214 IGKV2-29A2NJV5 120 aaPredicted RBP9.78□□□□□ -0.84
COL5A3-202ENST00000461214 FGF6P10767 208 aa9.78□□□□□ -0.84
COL5A3-202ENST00000461214 GAGE6Q13070 117 aa9.78□□□□□ -0.84
COL5A3-202ENST00000461214 AMMECR1LQ6DCA0 310 aa9.78□□□□□ -0.84
COL5A3-202ENST00000461214 RNASEKQ6P5S7 137 aaKnown RBP9.78□□□□□ -0.84
COL5A3-202ENST00000461214 BAGE3Q86Y29 109 aa9.78□□□□□ -0.84
COL5A3-202ENST00000461214 URB1-AS1Q96HZ7 61 aa9.78□□□□□ -0.84
COL5A3-202ENST00000461214 SPANXA1Q9NS26 97 aa9.78□□□□□ -0.84
COL5A3-202ENST00000461214 CSDC2Q9Y534 153 aaKnown RBP9.78□□□□□ -0.84
COL5A3-202ENST00000461214 C2orf66Q6UXQ4 117 aa9.77□□□□□ -0.85
COL5A3-202ENST00000461214 UBE2D4Q9Y2X8 147 aa9.77□□□□□ -0.85
COL5A3-202ENST00000461214 NBDYA0A0U1RRE5 68 aa9.76□□□□□ -0.85
COL5A3-202ENST00000461214 TMEM262E9PQX1 116 aa9.76□□□□□ -0.85
COL5A3-202ENST00000461214 NPSP0C0P6 89 aa9.76□□□□□ -0.85
COL5A3-202ENST00000461214 RBX1P62877 108 aa9.76□□□□□ -0.85
COL5A3-202ENST00000461214 TMEM101Q96IK0 257 aa9.76□□□□□ -0.85
COL5A3-202ENST00000461214 PYGO1Q9Y3Y4 419 aa9.76□□□□□ -0.85
COL5A3-202ENST00000461214 IGHV3-30P01768 117 aa9.75□□□□□ -0.85
COL5A3-202ENST00000461214 IGHV3-33P01772 117 aa9.75□□□□□ -0.85
COL5A3-202ENST00000461214 HBDP02042 147 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms