RNA–Protein interactions for RNA: ENST00000461195.5

TRAF4-207, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 787 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-207ENST00000461195 C1orf43Q9BWL3 253 aa14.87□□□□□ -0.03
TRAF4-207ENST00000461195 RPL39LQ96EH5 51 aaKnown RBP14.86□□□□□ -0.03
TRAF4-207ENST00000461195 AMTP48728 403 aa14.84□□□□□ -0.03
TRAF4-207ENST00000461195 MIAQ16674 131 aa14.84□□□□□ -0.03
TRAF4-207ENST00000461195 NUP35Q8NFH5 326 aa14.84□□□□□ -0.03
TRAF4-207ENST00000461195 DEFB104AQ8WTQ1 72 aa14.84□□□□□ -0.03
TRAF4-207ENST00000461195 TMEM191AQ9H0A3 160 aa14.84□□□□□ -0.03
TRAF4-207ENST00000461195 PRR34Q9NV39 138 aa14.84□□□□□ -0.03
TRAF4-207ENST00000461195 RIGQ13278 110 aa14.83□□□□□ -0.04
TRAF4-207ENST00000461195 LINC00269Q8N2A0 174 aa14.83□□□□□ -0.04
TRAF4-207ENST00000461195 NAT8BQ9UHF3 227 aa14.83□□□□□ -0.04
TRAF4-207ENST00000461195 UBE2L6O14933 153 aa14.82□□□□□ -0.04
TRAF4-207ENST00000461195 Q8N1X5 172 aa14.82□□□□□ -0.04
TRAF4-207ENST00000461195 IGLV2-33A0A075B6J2 118 aaPredicted RBP14.81□□□□□ -0.04
TRAF4-207ENST00000461195 A0A1B0GUV1 79 aa14.81□□□□□ -0.04
TRAF4-207ENST00000461195 RAB14P61106 215 aa14.81□□□□□ -0.04
TRAF4-207ENST00000461195 CLPSL2Q6UWE3 100 aa14.81□□□□□ -0.04
TRAF4-207ENST00000461195 SDHAF1A6NFY7 115 aa14.8□□□□□ -0.04
TRAF4-207ENST00000461195 NCR2O95944 276 aa14.8□□□□□ -0.04
TRAF4-207ENST00000461195 XGP55808 180 aa14.8□□□□□ -0.04
TRAF4-207ENST00000461195 C20orf203Q8NBC4 194 aa14.8□□□□□ -0.04
TRAF4-207ENST00000461195 TRBV6-5A0A0K0K1A5 114 aa14.79□□□□□ -0.04
TRAF4-207ENST00000461195 SMIM27A0A1W2PRY6 76 aa14.79□□□□□ -0.04
TRAF4-207ENST00000461195 RAB4AP20338 218 aa14.79□□□□□ -0.04
TRAF4-207ENST00000461195 MRAP2Q96G30 205 aa14.79□□□□□ -0.04
TRAF4-207ENST00000461195 RNF185Q96GF1 192 aa14.79□□□□□ -0.04
TRAF4-207ENST00000461195 IGLV4-60A0A075B6I1 120 aa14.78□□□□□ -0.04
TRAF4-207ENST00000461195 REG3AQ06141 175 aa14.78□□□□□ -0.04
TRAF4-207ENST00000461195 AMN1Q8IY45 258 aa14.78□□□□□ -0.04
TRAF4-207ENST00000461195 TMEM70Q9BUB7 260 aa14.78□□□□□ -0.04
TRAF4-207ENST00000461195 GAS8-AS1O95177 125 aa14.77□□□□□ -0.05
TRAF4-207ENST00000461195 HLA-DQA1P01909 254 aa14.77□□□□□ -0.05
TRAF4-207ENST00000461195 C14orf177Q52M58 125 aa14.77□□□□□ -0.05
TRAF4-207ENST00000461195 ST20Q9HBF5 79 aa14.77□□□□□ -0.05
TRAF4-207ENST00000461195 I3L3M4 83 aa14.76□□□□□ -0.05
TRAF4-207ENST00000461195 APCSP02743 223 aa14.76□□□□□ -0.05
TRAF4-207ENST00000461195 PMCHP20382 165 aa14.76□□□□□ -0.05
TRAF4-207ENST00000461195 TRAV8-4A0A0B4J246 113 aa14.74□□□□□ -0.05
TRAF4-207ENST00000461195 KRTAP26-1Q6PEX3 210 aa14.74□□□□□ -0.05
TRAF4-207ENST00000461195 A0A1B0GW15 77 aa14.73□□□□□ -0.05
TRAF4-207ENST00000461195 H7C423 109 aa14.73□□□□□ -0.05
TRAF4-207ENST00000461195 RPS10P46783 165 aaKnown RBP14.73□□□□□ -0.05
TRAF4-207ENST00000461195 IGLV10-54A0A075B6I4 117 aa14.72□□□□□ -0.05
TRAF4-207ENST00000461195 IGKV2D-29A0A075B6S2 120 aaPredicted RBP14.72□□□□□ -0.05
TRAF4-207ENST00000461195 IGKV2-29A2NJV5 120 aaPredicted RBP14.72□□□□□ -0.05
TRAF4-207ENST00000461195 USP17L23D6RBM5 183 aa14.72□□□□□ -0.05
TRAF4-207ENST00000461195 AMMECR1LQ6DCA0 310 aa14.72□□□□□ -0.05
TRAF4-207ENST00000461195 SMKR1H3BMG3 65 aa14.71□□□□□ -0.05
TRAF4-207ENST00000461195 PPP1R17O96001 155 aa14.71□□□□□ -0.05
TRAF4-207ENST00000461195 CAMPP49913 170 aa14.71□□□□□ -0.05
TRAF4-207ENST00000461195 POLR2KP53803 58 aaKnown RBP14.71□□□□□ -0.05
TRAF4-207ENST00000461195 TRBV27A0A0K0K1C4 114 aa14.7□□□□□ -0.06
TRAF4-207ENST00000461195 TSHBP01222 138 aa14.7□□□□□ -0.06
TRAF4-207ENST00000461195 CLLU1Q5K131 121 aa14.7□□□□□ -0.06
TRAF4-207ENST00000461195 FAM104BQ5XKR9 115 aa14.7□□□□□ -0.06
TRAF4-207ENST00000461195 RNASEKQ6P5S7 137 aaKnown RBP14.7□□□□□ -0.06
TRAF4-207ENST00000461195 TMEM242Q9NWH2 141 aa14.7□□□□□ -0.06
TRAF4-207ENST00000461195 FAM30AQ9NZY2 134 aa14.7□□□□□ -0.06
TRAF4-207ENST00000461195 HERC1Q15751 4861 aa14.7□□□□□ -0.06
TRAF4-207ENST00000461195 PPP1R2P9O14990 202 aa14.69□□□□□ -0.06
TRAF4-207ENST00000461195 FGF6P10767 208 aa14.69□□□□□ -0.06
TRAF4-207ENST00000461195 HAMPP81172 84 aa14.69□□□□□ -0.06
TRAF4-207ENST00000461195 EPM2AB3EWF7 344 aa14.68□□□□□ -0.06
TRAF4-207ENST00000461195 S100A8P05109 93 aa14.68□□□□□ -0.06
TRAF4-207ENST00000461195 ESDP10768 282 aa14.68□□□□□ -0.06
TRAF4-207ENST00000461195 PNRC1Q12796 327 aaPredicted RBP14.68□□□□□ -0.06
TRAF4-207ENST00000461195 LINC01620Q4KN68 170 aa14.68□□□□□ -0.06
TRAF4-207ENST00000461195 MRPL51Q4U2R6 128 aaKnown RBP14.68□□□□□ -0.06
TRAF4-207ENST00000461195 NRACQ8N912 160 aa14.68□□□□□ -0.06
TRAF4-207ENST00000461195 VCYO14598 125 aa14.67□□□□□ -0.06
TRAF4-207ENST00000461195 ZNF25P17030 456 aaPredicted RBP14.67□□□□□ -0.06
TRAF4-207ENST00000461195 HBBP68871 147 aa14.67□□□□□ -0.06
TRAF4-207ENST00000461195 MRPL54Q6P161 138 aaKnown RBP14.67□□□□□ -0.06
TRAF4-207ENST00000461195 Q6ZSA8 131 aa14.67□□□□□ -0.06
TRAF4-207ENST00000461195 SUMO2P61956 95 aaKnown RBP14.66□□□□□ -0.06
TRAF4-207ENST00000461195 IGKV3OR2-268A0A0C4DH90 116 aa14.65□□□□□ -0.06
TRAF4-207ENST00000461195 A0A1B0GXF2 115 aa14.65□□□□□ -0.06
TRAF4-207ENST00000461195 LINC00862A6NCI5 91 aa14.65□□□□□ -0.06
TRAF4-207ENST00000461195 F8W036 122 aa14.65□□□□□ -0.06
TRAF4-207ENST00000461195 PRSS1P07477 247 aa14.65□□□□□ -0.06
TRAF4-207ENST00000461195 TMEM101Q96IK0 257 aa14.65□□□□□ -0.06
TRAF4-207ENST00000461195 BTF3L4Q96K17 158 aa14.65□□□□□ -0.06
TRAF4-207ENST00000461195 DNAH8Q96JB1 4490 aa14.64□□□□□ -0.07
TRAF4-207ENST00000461195 SMR3BP02814 79 aaPredicted RBP14.64□□□□□ -0.07
TRAF4-207ENST00000461195 CKS2P33552 79 aa14.64□□□□□ -0.07
TRAF4-207ENST00000461195 IFITM2Q01629 132 aa14.64□□□□□ -0.07
TRAF4-207ENST00000461195 CLRN3Q8NCR9 226 aa14.64□□□□□ -0.07
TRAF4-207ENST00000461195 FCER1GP30273 86 aa14.63□□□□□ -0.07
TRAF4-207ENST00000461195 DGAT2L7PQ6IED9 249 aa14.63□□□□□ -0.07
TRAF4-207ENST00000461195 ATP5L2Q7Z4Y8 100 aa14.63□□□□□ -0.07
TRAF4-207ENST00000461195 C7orf77A4D0Y5 90 aa14.62□□□□□ -0.07
TRAF4-207ENST00000461195 MT-ND4LP03901 98 aa14.62□□□□□ -0.07
TRAF4-207ENST00000461195 Q5VSD8 79 aa14.62□□□□□ -0.07
TRAF4-207ENST00000461195 ANAPC16Q96DE5 110 aa14.62□□□□□ -0.07
TRAF4-207ENST00000461195 KIR2DL4Q99706 377 aa14.62□□□□□ -0.07
TRAF4-207ENST00000461195 TRBV24-1A0A075B6N3 115 aa14.61□□□□□ -0.07
TRAF4-207ENST00000461195 MRPL52Q86TS9 123 aaKnown RBP14.61□□□□□ -0.07
TRAF4-207ENST00000461195 OR5A1Q8NGJ0 315 aa14.61□□□□□ -0.07
TRAF4-207ENST00000461195 C20orf78Q9BR46 151 aa14.61□□□□□ -0.07
TRAF4-207ENST00000461195 GAGE12HA6NDE8 117 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 105.4 ms