RNA–Protein interactions for RNA: ENST00000461004.1

RTN4-212, Transcript of reticulon 4, humanhuman

TSL 3

Gene RTN4, Length 422 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-212ENST00000461004 IGHV3-30-5P0DP03 117 aa4.93□□□□□ -1.62
RTN4-212ENST00000461004 RAB4AP20338 218 aa4.93□□□□□ -1.62
RTN4-212ENST00000461004 CAMPP49913 170 aa4.93□□□□□ -1.62
RTN4-212ENST00000461004 OR10J3Q5JRS4 329 aa4.93□□□□□ -1.62
RTN4-212ENST00000461004 MRPL54Q6P161 138 aaKnown RBP4.93□□□□□ -1.62
RTN4-212ENST00000461004 RASL11AQ6T310 242 aa4.93□□□□□ -1.62
RTN4-212ENST00000461004 SH2D6Q7Z4S9 175 aa4.93□□□□□ -1.62
RTN4-212ENST00000461004 AMN1Q8IY45 258 aa4.93□□□□□ -1.62
RTN4-212ENST00000461004 KRTAP4-5Q9BYR2 181 aa4.93□□□□□ -1.62
RTN4-212ENST00000461004 BIRC6Q9NR09 4857 aa4.93□□□□□ -1.62
RTN4-212ENST00000461004 NAT8BQ9UHF3 227 aa4.93□□□□□ -1.62
RTN4-212ENST00000461004 PKD1P98161 4303 aa4.92□□□□□ -1.62
RTN4-212ENST00000461004 A0A1B0GXF2 115 aa4.92□□□□□ -1.62
RTN4-212ENST00000461004 DNAH10OSP0CZ25 163 aa4.92□□□□□ -1.62
RTN4-212ENST00000461004 RPS10P46783 165 aaKnown RBP4.92□□□□□ -1.62
RTN4-212ENST00000461004 PNRC1Q12796 327 aaPredicted RBP4.92□□□□□ -1.62
RTN4-212ENST00000461004 RIGQ13278 110 aa4.92□□□□□ -1.62
RTN4-212ENST00000461004 C10orf91Q5T1B1 145 aa4.92□□□□□ -1.62
RTN4-212ENST00000461004 C1orf134Q5TEV5 83 aa4.92□□□□□ -1.62
RTN4-212ENST00000461004 BORCS7Q96B45 105 aa4.92□□□□□ -1.62
RTN4-212ENST00000461004 DNAJC30Q96LL9 226 aa4.92□□□□□ -1.62
RTN4-212ENST00000461004 SEC11CQ9BY50 192 aa4.92□□□□□ -1.62
RTN4-212ENST00000461004 TMEM191AQ9H0A3 160 aa4.92□□□□□ -1.62
RTN4-212ENST00000461004 NIT2Q9NQR4 276 aa4.92□□□□□ -1.62
RTN4-212ENST00000461004 TRAV8-6A0A0B4J262 113 aa4.91□□□□□ -1.62
RTN4-212ENST00000461004 PPP1R2P9O14990 202 aa4.91□□□□□ -1.62
RTN4-212ENST00000461004 NCR2O95944 276 aa4.91□□□□□ -1.62
RTN4-212ENST00000461004 MT-ND4LP03901 98 aa4.91□□□□□ -1.62
RTN4-212ENST00000461004 SMIM15Q7Z3B0 74 aa4.91□□□□□ -1.62
RTN4-212ENST00000461004 DAZ4Q86SG3 579 aaKnown RBP4.91□□□□□ -1.62
RTN4-212ENST00000461004 SLC7A5P1Q8MH63 180 aa4.91□□□□□ -1.62
RTN4-212ENST00000461004 C6orf223Q8N319 242 aa4.91□□□□□ -1.62
RTN4-212ENST00000461004 TM2D2Q9BX73 214 aa4.91□□□□□ -1.62
RTN4-212ENST00000461004 DAZ3Q9NR90 486 aaKnown RBP4.91□□□□□ -1.62
RTN4-212ENST00000461004 HECTD4Q9Y4D8 3996 aa4.91□□□□□ -1.62
RTN4-212ENST00000461004 TRBV6-8A0A0A6YYG3 113 aa4.9□□□□□ -1.63
RTN4-212ENST00000461004 H7C1H1 209 aa4.9□□□□□ -1.63
RTN4-212ENST00000461004 MRPL51Q4U2R6 128 aaKnown RBP4.9□□□□□ -1.63
RTN4-212ENST00000461004 LINC01556Q5JQF7 62 aa4.9□□□□□ -1.63
RTN4-212ENST00000461004 FAM104BQ5XKR9 115 aa4.9□□□□□ -1.63
RTN4-212ENST00000461004 Q6ZRN7 208 aaPredicted RBP4.9□□□□□ -1.63
RTN4-212ENST00000461004 NIT1Q86X76 327 aa4.9□□□□□ -1.63
RTN4-212ENST00000461004 CARHSP1Q9Y2V2 147 aaKnown RBP4.9□□□□□ -1.63
RTN4-212ENST00000461004 DNAH5Q8TE73 4624 aa4.9□□□□□ -1.63
RTN4-212ENST00000461004 A0A087WWC5 75 aa4.89□□□□□ -1.63
RTN4-212ENST00000461004 A0A1B0GVY2 172 aa4.89□□□□□ -1.63
RTN4-212ENST00000461004 C7orf77A4D0Y5 90 aa4.89□□□□□ -1.63
RTN4-212ENST00000461004 TMEM262E9PQX1 116 aa4.89□□□□□ -1.63
RTN4-212ENST00000461004 FUSP35637 526 aaKnown RBP eCLIP4.89□□□□□ -1.63
RTN4-212ENST00000461004 HBBP68871 147 aa4.89□□□□□ -1.63
RTN4-212ENST00000461004 GAGE6Q13070 117 aa4.89□□□□□ -1.63
RTN4-212ENST00000461004 TTC32Q5I0X7 151 aa4.89□□□□□ -1.63
RTN4-212ENST00000461004 NRACQ8N912 160 aa4.89□□□□□ -1.63
RTN4-212ENST00000461004 Q9HAA7 133 aa4.89□□□□□ -1.63
RTN4-212ENST00000461004 PKHD1P08F94 4074 aa4.88□□□□□ -1.63
RTN4-212ENST00000461004 TRBV6-5A0A0K0K1A5 114 aa4.88□□□□□ -1.63
RTN4-212ENST00000461004 SDHAF1A6NFY7 115 aa4.88□□□□□ -1.63
RTN4-212ENST00000461004 IBA57-AS1B1ANH7 110 aa4.88□□□□□ -1.63
RTN4-212ENST00000461004 MPV17L2Q567V2 206 aa4.88□□□□□ -1.63
RTN4-212ENST00000461004 ATRAIDQ6UW56 229 aa4.88□□□□□ -1.63
RTN4-212ENST00000461004 Q8N976 141 aa4.88□□□□□ -1.63
RTN4-212ENST00000461004 CHCHD5Q9BSY4 110 aa4.88□□□□□ -1.63
RTN4-212ENST00000461004 KLK12Q9UKR0 248 aa4.88□□□□□ -1.63
RTN4-212ENST00000461004 URGCP-MRPS24S4R325 110 aa4.88□□□□□ -1.63
RTN4-212ENST00000461004 TRAV9-2A0A087WT02 112 aa4.87□□□□□ -1.63
RTN4-212ENST00000461004 IGHV1-24A0A0C4DH33 117 aa4.87□□□□□ -1.63
RTN4-212ENST00000461004 TSHBP01222 138 aa4.87□□□□□ -1.63
RTN4-212ENST00000461004 APOC3P02656 99 aa4.87□□□□□ -1.63
RTN4-212ENST00000461004 POLR2KP53803 58 aaKnown RBP4.87□□□□□ -1.63
RTN4-212ENST00000461004 IQCJQ1A5X6 159 aa4.87□□□□□ -1.63
RTN4-212ENST00000461004 DGAT2L7PQ6IED9 249 aa4.87□□□□□ -1.63
RTN4-212ENST00000461004 FRZBQ92765 325 aa4.87□□□□□ -1.63
RTN4-212ENST00000461004 MRAP2Q96G30 205 aa4.87□□□□□ -1.63
RTN4-212ENST00000461004 BTF3L4Q96K17 158 aa4.87□□□□□ -1.63
RTN4-212ENST00000461004 TMEM70Q9BUB7 260 aa4.87□□□□□ -1.63
RTN4-212ENST00000461004 CTDSP1Q9GZU7 261 aa4.87□□□□□ -1.63
RTN4-212ENST00000461004 ST20Q9HBF5 79 aa4.87□□□□□ -1.63
RTN4-212ENST00000461004 RPS10P5Q9NQ39 176 aa4.87□□□□□ -1.63
RTN4-212ENST00000461004 TMEM242Q9NWH2 141 aa4.87□□□□□ -1.63
RTN4-212ENST00000461004 LRP1BQ9NZR2 4599 aa4.87□□□□□ -1.63
RTN4-212ENST00000461004 IGLV4-60A0A075B6I1 120 aa4.86□□□□□ -1.63
RTN4-212ENST00000461004 TRBV25-1A0A075B6N4 114 aa4.86□□□□□ -1.63
RTN4-212ENST00000461004 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.86□□□□□ -1.63
RTN4-212ENST00000461004 A0A087WX48 190 aa4.86□□□□□ -1.63
RTN4-212ENST00000461004 A0A1B0GW15 77 aa4.86□□□□□ -1.63
RTN4-212ENST00000461004 IGKV2-29A2NJV5 120 aaPredicted RBP4.86□□□□□ -1.63
RTN4-212ENST00000461004 D6R8Y8 96 aa4.86□□□□□ -1.63
RTN4-212ENST00000461004 I3L3M4 83 aa4.86□□□□□ -1.63
RTN4-212ENST00000461004 NPYP01303 97 aa4.86□□□□□ -1.63
RTN4-212ENST00000461004 PMCHP20382 165 aa4.86□□□□□ -1.63
RTN4-212ENST00000461004 CKS2P33552 79 aa4.86□□□□□ -1.63
RTN4-212ENST00000461004 AMTP48728 403 aa4.86□□□□□ -1.63
RTN4-212ENST00000461004 RBX1P62877 108 aa4.86□□□□□ -1.63
RTN4-212ENST00000461004 COTL1Q14019 142 aa4.86□□□□□ -1.63
RTN4-212ENST00000461004 CLPSL2Q6UWE3 100 aa4.86□□□□□ -1.63
RTN4-212ENST00000461004 ENHOQ6UWT2 76 aa4.86□□□□□ -1.63
RTN4-212ENST00000461004 TMEM136Q6ZRR5 245 aa4.86□□□□□ -1.63
RTN4-212ENST00000461004 LINC00336Q6ZUF6 198 aa4.86□□□□□ -1.63
RTN4-212ENST00000461004 ATP5L2Q7Z4Y8 100 aa4.86□□□□□ -1.63
RTN4-212ENST00000461004 MAPKAPK5-AS1Q8N8E1 139 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms