RNA–Protein interactions for RNA: ENST00000460483.5

SMNDC1-203, Transcript of survival motor neuron domain containing 1, humanhuman

TSL 3

Gene SMNDC1, Length 753 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-203ENST00000460483 UPK3BQ9BT76 320 aa7.64□□□□□ -1.19
SMNDC1-203ENST00000460483 TMEM70Q9BUB7 260 aa7.64□□□□□ -1.19
SMNDC1-203ENST00000460483 NXT2Q9NPJ8 142 aaKnown RBP7.64□□□□□ -1.19
SMNDC1-203ENST00000460483 MRPS16Q9Y3D3 137 aaKnown RBP7.64□□□□□ -1.19
SMNDC1-203ENST00000460483 LINC01549A6NIU2 74 aa7.63□□□□□ -1.19
SMNDC1-203ENST00000460483 H7C423 109 aa7.63□□□□□ -1.19
SMNDC1-203ENST00000460483 LINC00694P0DN24 101 aa7.63□□□□□ -1.19
SMNDC1-203ENST00000460483 ESRGQ1W209 222 aa7.63□□□□□ -1.19
SMNDC1-203ENST00000460483 RPL39LQ96EH5 51 aaKnown RBP7.63□□□□□ -1.19
SMNDC1-203ENST00000460483 CHCHD7Q9BUK0 85 aa7.63□□□□□ -1.19
SMNDC1-203ENST00000460483 TGP01266 2768 aa7.63□□□□□ -1.19
SMNDC1-203ENST00000460483 A0A087WX48 190 aa7.62□□□□□ -1.19
SMNDC1-203ENST00000460483 PRSS47A8MTI9 375 aa7.62□□□□□ -1.19
SMNDC1-203ENST00000460483 SIVA1O15304 175 aa7.62□□□□□ -1.19
SMNDC1-203ENST00000460483 LY6G6CO95867 125 aa7.62□□□□□ -1.19
SMNDC1-203ENST00000460483 AMTP48728 403 aa7.62□□□□□ -1.19
SMNDC1-203ENST00000460483 IQCJQ1A5X6 159 aa7.62□□□□□ -1.19
SMNDC1-203ENST00000460483 TTC32Q5I0X7 151 aa7.62□□□□□ -1.19
SMNDC1-203ENST00000460483 C10orf126Q8N4M7 172 aa7.62□□□□□ -1.19
SMNDC1-203ENST00000460483 NRACQ8N912 160 aa7.62□□□□□ -1.19
SMNDC1-203ENST00000460483 PRSS3P2Q8NHM4 247 aa7.62□□□□□ -1.19
SMNDC1-203ENST00000460483 YPEL4Q96NS1 127 aa7.62□□□□□ -1.19
SMNDC1-203ENST00000460483 TMEM243Q9BU79 118 aa7.62□□□□□ -1.19
SMNDC1-203ENST00000460483 MUC4Q99102 2169 aa7.61□□□□□ -1.19
SMNDC1-203ENST00000460483 IGHV3-38A0A0C4DH36 116 aa7.61□□□□□ -1.19
SMNDC1-203ENST00000460483 TMEM262E9PQX1 116 aa7.61□□□□□ -1.19
SMNDC1-203ENST00000460483 SMKR1H3BMG3 65 aa7.61□□□□□ -1.19
SMNDC1-203ENST00000460483 POLR2KP53803 58 aaKnown RBP7.61□□□□□ -1.19
SMNDC1-203ENST00000460483 ORMDL2Q53FV1 153 aa7.61□□□□□ -1.19
SMNDC1-203ENST00000460483 CHCHD5Q9BSY4 110 aa7.61□□□□□ -1.19
SMNDC1-203ENST00000460483 SMIM2Q9BVW6 85 aa7.61□□□□□ -1.19
SMNDC1-203ENST00000460483 LINC00588Q9Y4M8 146 aa7.61□□□□□ -1.19
SMNDC1-203ENST00000460483 COLCA2A8K830 154 aa7.6□□□□□ -1.19
SMNDC1-203ENST00000460483 NPYP01303 97 aa7.6□□□□□ -1.19
SMNDC1-203ENST00000460483 BTF3P20290 206 aaKnown RBP7.6□□□□□ -1.19
SMNDC1-203ENST00000460483 LINC00476Q8WZB0 136 aa7.6□□□□□ -1.19
SMNDC1-203ENST00000460483 ALKBH7Q9BT30 221 aaPredicted RBP7.6□□□□□ -1.19
SMNDC1-203ENST00000460483 Q9H8V8 135 aa7.6□□□□□ -1.19
SMNDC1-203ENST00000460483 KIAA1644Q3SXP7 199 aa7.59□□□□□ -1.19
SMNDC1-203ENST00000460483 LCE1DQ5T752 114 aa7.59□□□□□ -1.19
SMNDC1-203ENST00000460483 AMMECR1LQ6DCA0 310 aa7.59□□□□□ -1.19
SMNDC1-203ENST00000460483 DGAT2L7PQ6IED9 249 aa7.59□□□□□ -1.19
SMNDC1-203ENST00000460483 FA2HQ7L5A8 372 aa7.59□□□□□ -1.19
SMNDC1-203ENST00000460483 Q8N8P6 123 aa7.59□□□□□ -1.19
SMNDC1-203ENST00000460483 TMEM101Q96IK0 257 aa7.59□□□□□ -1.19
SMNDC1-203ENST00000460483 LOC389332A0A1B0GUA5 103 aa7.58□□□□□ -1.2
SMNDC1-203ENST00000460483 ZNF25P17030 456 aaPredicted RBP7.58□□□□□ -1.2
SMNDC1-203ENST00000460483 Q9UF83 564 aa7.58□□□□□ -1.2
SMNDC1-203ENST00000460483 SCO1O75880 301 aa7.57□□□□□ -1.2
SMNDC1-203ENST00000460483 TRGC2P03986 189 aa7.57□□□□□ -1.2
SMNDC1-203ENST00000460483 DNAH10OSP0CZ25 163 aa7.57□□□□□ -1.2
SMNDC1-203ENST00000460483 LAGE3Q14657 143 aa7.57□□□□□ -1.2
SMNDC1-203ENST00000460483 LINC01556Q5JQF7 62 aa7.57□□□□□ -1.2
SMNDC1-203ENST00000460483 PAPPA-AS1Q5QFB9 102 aa7.57□□□□□ -1.2
SMNDC1-203ENST00000460483 AP5S1Q9NUS5 200 aa7.57□□□□□ -1.2
SMNDC1-203ENST00000460483 LCE6AA0A183 80 aa7.56□□□□□ -1.2
SMNDC1-203ENST00000460483 A0A1B0GUV1 79 aa7.56□□□□□ -1.2
SMNDC1-203ENST00000460483 TSHBP01222 138 aa7.56□□□□□ -1.2
SMNDC1-203ENST00000460483 LINC00614P0C842 121 aa7.56□□□□□ -1.2
SMNDC1-203ENST00000460483 NIT1Q86X76 327 aa7.56□□□□□ -1.2
SMNDC1-203ENST00000460483 BAGE3Q86Y29 109 aa7.56□□□□□ -1.2
SMNDC1-203ENST00000460483 C1orf196B1AJZ1 125 aa7.55□□□□□ -1.2
SMNDC1-203ENST00000460483 GAS8-AS1O95177 125 aa7.55□□□□□ -1.2
SMNDC1-203ENST00000460483 CRPP02741 224 aa7.55□□□□□ -1.2
SMNDC1-203ENST00000460483 Q0VG73 95 aa7.55□□□□□ -1.2
SMNDC1-203ENST00000460483 NTM-AS1Q6ZSK4 140 aa7.55□□□□□ -1.2
SMNDC1-203ENST00000460483 NFE4Q86UQ8 179 aa7.55□□□□□ -1.2
SMNDC1-203ENST00000460483 CHCHD1Q96BP2 118 aaKnown RBP7.55□□□□□ -1.2
SMNDC1-203ENST00000460483 RMI2Q96E14 147 aa7.55□□□□□ -1.2
SMNDC1-203ENST00000460483 KRTAP4-7Q9BYR0 210 aa7.55□□□□□ -1.2
SMNDC1-203ENST00000460483 CYSLTR1Q9Y271 337 aa7.55□□□□□ -1.2
SMNDC1-203ENST00000460483 COX11Q9Y6N1 276 aa7.55□□□□□ -1.2
SMNDC1-203ENST00000460483 TRAV8-3A0A0A6YYJ7 113 aa7.54□□□□□ -1.2
SMNDC1-203ENST00000460483 NPSP0C0P6 89 aa7.54□□□□□ -1.2
SMNDC1-203ENST00000460483 ESDP10768 282 aa7.54□□□□□ -1.2
SMNDC1-203ENST00000460483 IFI27P40305 119 aaPredicted RBP7.54□□□□□ -1.2
SMNDC1-203ENST00000460483 RNASEKQ6P5S7 137 aaKnown RBP7.54□□□□□ -1.2
SMNDC1-203ENST00000460483 WFDC10BQ8IUB3 73 aa7.54□□□□□ -1.2
SMNDC1-203ENST00000460483 C20orf203Q8NBC4 194 aa7.54□□□□□ -1.2
SMNDC1-203ENST00000460483 OR5A1Q8NGJ0 315 aa7.54□□□□□ -1.2
SMNDC1-203ENST00000460483 C18orf32Q8TCD1 76 aa7.54□□□□□ -1.2
SMNDC1-203ENST00000460483 TIMM21Q9BVV7 248 aa7.54□□□□□ -1.2
SMNDC1-203ENST00000460483 SPANXA1Q9NS26 97 aa7.54□□□□□ -1.2
SMNDC1-203ENST00000460483 CSDC2Q9Y534 153 aaKnown RBP7.54□□□□□ -1.2
SMNDC1-203ENST00000460483 NBDYA0A0U1RRE5 68 aa7.53□□□□□ -1.2
SMNDC1-203ENST00000460483 HSBP1O75506 76 aa7.53□□□□□ -1.2
SMNDC1-203ENST00000460483 FGF6P10767 208 aa7.53□□□□□ -1.2
SMNDC1-203ENST00000460483 GAGE6Q13070 117 aa7.53□□□□□ -1.2
SMNDC1-203ENST00000460483 Q6ZN92 141 aa7.53□□□□□ -1.2
SMNDC1-203ENST00000460483 MRPL52Q86TS9 123 aaKnown RBP7.53□□□□□ -1.2
SMNDC1-203ENST00000460483 IGLV2-18A0A075B6J9 118 aa7.52□□□□□ -1.21
SMNDC1-203ENST00000460483 CCL25O15444 150 aa7.52□□□□□ -1.21
SMNDC1-203ENST00000460483 ANGP03950 147 aaKnown RBP7.52□□□□□ -1.21
SMNDC1-203ENST00000460483 CDPF1Q6NVV7 123 aa7.52□□□□□ -1.21
SMNDC1-203ENST00000460483 TM2D2Q9BX73 214 aa7.52□□□□□ -1.21
SMNDC1-203ENST00000460483 PYGO1Q9Y3Y4 419 aa7.52□□□□□ -1.21
SMNDC1-203ENST00000460483 TRAV8-4A0A0B4J246 113 aa7.51□□□□□ -1.21
SMNDC1-203ENST00000460483 LINC01546A6NGU7 62 aa7.51□□□□□ -1.21
SMNDC1-203ENST00000460483 IBA57-AS1B1ANH7 110 aa7.51□□□□□ -1.21
SMNDC1-203ENST00000460483 IGHV3-30P01768 117 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 91 ms