RNA–Protein interactions for RNA: ENST00000460480.1

SLC6A1-203, Transcript of solute carrier family 6 member 1, humanhuman

TSL 4

Gene SLC6A1, Length 457 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A1-203ENST00000460480 RNF213Q63HN8 5207 aa9.31□□□□□ -0.92
SLC6A1-203ENST00000460480 IGHV3-64A0A075B6Q5 118 aa9.3□□□□□ -0.92
SLC6A1-203ENST00000460480 A0A087WYN8 130 aa9.3□□□□□ -0.92
SLC6A1-203ENST00000460480 KANTRA0A1W2PQU2 76 aa9.3□□□□□ -0.92
SLC6A1-203ENST00000460480 MGPP08493 103 aa9.3□□□□□ -0.92
SLC6A1-203ENST00000460480 SPACA4Q8TDM5 124 aa9.3□□□□□ -0.92
SLC6A1-203ENST00000460480 LRP2P98164 4655 aa9.29□□□□□ -0.92
SLC6A1-203ENST00000460480 CHTF8P0CG12 524 aa9.29□□□□□ -0.92
SLC6A1-203ENST00000460480 RAB5CP51148 216 aa9.29□□□□□ -0.92
SLC6A1-203ENST00000460480 EIF5AP63241 154 aaKnown RBP9.29□□□□□ -0.92
SLC6A1-203ENST00000460480 CNFNQ9BYD5 112 aa9.29□□□□□ -0.92
SLC6A1-203ENST00000460480 PLAC8Q9NZF1 115 aa9.29□□□□□ -0.92
SLC6A1-203ENST00000460480 TNXBP22105 4242 aa9.29□□□□□ -0.92
SLC6A1-203ENST00000460480 C15orf56Q8N910 161 aa9.28□□□□□ -0.92
SLC6A1-203ENST00000460480 DPH3P1Q9H4G8 78 aa9.28□□□□□ -0.92
SLC6A1-203ENST00000460480 IFNA1P01562 189 aa9.27□□□□□ -0.93
SLC6A1-203ENST00000460480 TRGC1P0CF51 173 aa9.27□□□□□ -0.93
SLC6A1-203ENST00000460480 GNG4P50150 75 aa9.27□□□□□ -0.93
SLC6A1-203ENST00000460480 MEF2BQ02080 365 aaPredicted RBP9.27□□□□□ -0.93
SLC6A1-203ENST00000460480 GATD1Q8NB37 220 aa9.27□□□□□ -0.93
SLC6A1-203ENST00000460480 NUDT10Q8NFP7 164 aa9.27□□□□□ -0.93
SLC6A1-203ENST00000460480 NUDT11Q96G61 164 aa9.27□□□□□ -0.93
SLC6A1-203ENST00000460480 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.26□□□□□ -0.93
SLC6A1-203ENST00000460480 XKRY2A2RUG3 117 aa9.26□□□□□ -0.93
SLC6A1-203ENST00000460480 PDE6DO43924 150 aa9.26□□□□□ -0.93
SLC6A1-203ENST00000460480 CTRLP40313 264 aa9.26□□□□□ -0.93
SLC6A1-203ENST00000460480 SULT1A2P50226 295 aa9.26□□□□□ -0.93
SLC6A1-203ENST00000460480 AP5S1Q9NUS5 200 aa9.26□□□□□ -0.93
SLC6A1-203ENST00000460480 GAGE12HA6NDE8 117 aa9.25□□□□□ -0.93
SLC6A1-203ENST00000460480 AMTP48728 403 aa9.25□□□□□ -0.93
SLC6A1-203ENST00000460480 COTL1Q14019 142 aa9.25□□□□□ -0.93
SLC6A1-203ENST00000460480 DPH3Q96FX2 82 aa9.25□□□□□ -0.93
SLC6A1-203ENST00000460480 PRSS3P2Q8NHM4 247 aa9.24□□□□□ -0.93
SLC6A1-203ENST00000460480 MED9Q9NWA0 146 aa9.24□□□□□ -0.93
SLC6A1-203ENST00000460480 K7EN84 100 aa9.23□□□□□ -0.93
SLC6A1-203ENST00000460480 RPS10P46783 165 aaKnown RBP9.23□□□□□ -0.93
SLC6A1-203ENST00000460480 COX6A2Q02221 97 aa9.23□□□□□ -0.93
SLC6A1-203ENST00000460480 CFAP161Q6P656 301 aa9.23□□□□□ -0.93
SLC6A1-203ENST00000460480 BIN3Q9NQY0 253 aa9.23□□□□□ -0.93
SLC6A1-203ENST00000460480 TRAV26-2A0A0B4J265 109 aa9.22□□□□□ -0.93
SLC6A1-203ENST00000460480 PHOX2AO14813 284 aa9.22□□□□□ -0.93
SLC6A1-203ENST00000460480 FOXA3P55318 350 aaPredicted RBP9.22□□□□□ -0.93
SLC6A1-203ENST00000460480 TWIST1Q15672 202 aa9.22□□□□□ -0.93
SLC6A1-203ENST00000460480 OCC1Q8TAD7 63 aa9.22□□□□□ -0.93
SLC6A1-203ENST00000460480 GVQW2A0A096LPI5 108 aaPredicted RBP9.21□□□□□ -0.94
SLC6A1-203ENST00000460480 FAM231BA6NCW3 169 aa9.21□□□□□ -0.94
SLC6A1-203ENST00000460480 TEX46H3BTG2 121 aa9.21□□□□□ -0.94
SLC6A1-203ENST00000460480 UBE2L6O14933 153 aa9.21□□□□□ -0.94
SLC6A1-203ENST00000460480 BCL2P10415 239 aa9.21□□□□□ -0.94
SLC6A1-203ENST00000460480 EIF5AL1Q6IS14 154 aaKnown RBP9.21□□□□□ -0.94
SLC6A1-203ENST00000460480 Q6ZNX1 250 aa9.21□□□□□ -0.94
SLC6A1-203ENST00000460480 GTSF1Q8WW33 167 aa9.21□□□□□ -0.94
SLC6A1-203ENST00000460480 RNASE7Q9H1E1 156 aaKnown RBP9.21□□□□□ -0.94
SLC6A1-203ENST00000460480 H7C423 109 aa9.2□□□□□ -0.94
SLC6A1-203ENST00000460480 NDUFS6O75380 124 aaKnown RBP9.2□□□□□ -0.94
SLC6A1-203ENST00000460480 NCR2O95944 276 aa9.2□□□□□ -0.94
SLC6A1-203ENST00000460480 FOXI1Q12951 378 aa9.2□□□□□ -0.94
SLC6A1-203ENST00000460480 HIGD2BQ4VC39 106 aa9.2□□□□□ -0.94
SLC6A1-203ENST00000460480 CHCHD10Q8WYQ3 142 aaPredicted RBP9.2□□□□□ -0.94
SLC6A1-203ENST00000460480 RPL39LQ96EH5 51 aaKnown RBP9.2□□□□□ -0.94
SLC6A1-203ENST00000460480 LINC01600Q96MT4 127 aa9.2□□□□□ -0.94
SLC6A1-203ENST00000460480 RPP21Q9H633 154 aaKnown RBP9.2□□□□□ -0.94
SLC6A1-203ENST00000460480 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.18□□□□□ -0.94
SLC6A1-203ENST00000460480 IGKV3OR2-268A0A0C4DH90 116 aa9.18□□□□□ -0.94
SLC6A1-203ENST00000460480 IGKV2-29A2NJV5 120 aaPredicted RBP9.18□□□□□ -0.94
SLC6A1-203ENST00000460480 FGF6P10767 208 aa9.18□□□□□ -0.94
SLC6A1-203ENST00000460480 SMCPP49901 116 aaPredicted RBP9.18□□□□□ -0.94
SLC6A1-203ENST00000460480 MAJINQ3KP22 176 aa9.18□□□□□ -0.94
SLC6A1-203ENST00000460480 TRBV6-5A0A0K0K1A5 114 aa9.17□□□□□ -0.94
SLC6A1-203ENST00000460480 SDHAF1A6NFY7 115 aa9.17□□□□□ -0.94
SLC6A1-203ENST00000460480 ESDP10768 282 aa9.17□□□□□ -0.94
SLC6A1-203ENST00000460480 KRTAP10-8P60410 259 aa9.17□□□□□ -0.94
SLC6A1-203ENST00000460480 C7orf33Q8WU49 177 aa9.17□□□□□ -0.94
SLC6A1-203ENST00000460480 A0A096LNI7 61 aa9.16□□□□□ -0.94
SLC6A1-203ENST00000460480 GAS8-AS1O95177 125 aa9.16□□□□□ -0.94
SLC6A1-203ENST00000460480 TAGLN2P37802 199 aaKnown RBP9.16□□□□□ -0.94
SLC6A1-203ENST00000460480 PRR3P79522 188 aaKnown RBP9.16□□□□□ -0.94
SLC6A1-203ENST00000460480 SRSF9Q13242 221 aaKnown RBP eCLIP9.16□□□□□ -0.94
SLC6A1-203ENST00000460480 TEX261Q6UWH6 196 aa9.16□□□□□ -0.94
SLC6A1-203ENST00000460480 STPG4Q8N801 248 aa9.16□□□□□ -0.94
SLC6A1-203ENST00000460480 OR5A1Q8NGJ0 315 aa9.16□□□□□ -0.94
SLC6A1-203ENST00000460480 IGKV2-24A0A0C4DH68 120 aa9.15□□□□□ -0.94
SLC6A1-203ENST00000460480 LINC00959A0A1B0GUT2 108 aa9.15□□□□□ -0.94
SLC6A1-203ENST00000460480 ZNF25P17030 456 aaPredicted RBP9.15□□□□□ -0.94
SLC6A1-203ENST00000460480 AMMECR1LQ6DCA0 310 aa9.15□□□□□ -0.94
SLC6A1-203ENST00000460480 RNASEKQ6P5S7 137 aaKnown RBP9.15□□□□□ -0.94
SLC6A1-203ENST00000460480 SLC51BQ86UW2 128 aa9.15□□□□□ -0.94
SLC6A1-203ENST00000460480 TSHBP01222 138 aa9.14□□□□□ -0.95
SLC6A1-203ENST00000460480 ODF1Q14990 250 aa9.14□□□□□ -0.95
SLC6A1-203ENST00000460480 FAM231DQ6ZW35 169 aa9.14□□□□□ -0.95
SLC6A1-203ENST00000460480 TCTE3Q8IZS6 198 aa9.14□□□□□ -0.95
SLC6A1-203ENST00000460480 I3L3M4 83 aa9.13□□□□□ -0.95
SLC6A1-203ENST00000460480 APCSP02743 223 aa9.13□□□□□ -0.95
SLC6A1-203ENST00000460480 POLR2KP53803 58 aaKnown RBP9.13□□□□□ -0.95
SLC6A1-203ENST00000460480 MRPL52Q86TS9 123 aaKnown RBP9.13□□□□□ -0.95
SLC6A1-203ENST00000460480 LYPD6BQ8NI32 183 aa9.13□□□□□ -0.95
SLC6A1-203ENST00000460480 LINC00526Q96FQ7 95 aa9.13□□□□□ -0.95
SLC6A1-203ENST00000460480 FAM210AQ96ND0 272 aa9.13□□□□□ -0.95
SLC6A1-203ENST00000460480 CDC42SE2Q9NRR3 84 aa9.13□□□□□ -0.95
SLC6A1-203ENST00000460480 A0A0J9YXV3 536 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms