RNA–Protein interactions for RNA: ENST00000460235.1

HDAC4-206, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 343 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-206ENST00000460235 TMEM243Q9BU79 118 aa8.54□□□□□ -1.04
HDAC4-206ENST00000460235 CHCHD7Q9BUK0 85 aa8.54□□□□□ -1.04
HDAC4-206ENST00000460235 IGHV3-38A0A0C4DH36 116 aa8.53□□□□□ -1.04
HDAC4-206ENST00000460235 LOC389332A0A1B0GUA5 103 aa8.53□□□□□ -1.04
HDAC4-206ENST00000460235 C1orf196B1AJZ1 125 aa8.53□□□□□ -1.04
HDAC4-206ENST00000460235 CHCHD5Q9BSY4 110 aa8.53□□□□□ -1.04
HDAC4-206ENST00000460235 A0A087WX48 190 aa8.52□□□□□ -1.05
HDAC4-206ENST00000460235 LAGE3Q14657 143 aa8.52□□□□□ -1.05
HDAC4-206ENST00000460235 BAGE3Q86Y29 109 aa8.52□□□□□ -1.05
HDAC4-206ENST00000460235 C10orf126Q8N4M7 172 aa8.52□□□□□ -1.05
HDAC4-206ENST00000460235 Q9UF83 564 aa8.52□□□□□ -1.05
HDAC4-206ENST00000460235 TMEM262E9PQX1 116 aa8.51□□□□□ -1.05
HDAC4-206ENST00000460235 SIVA1O15304 175 aa8.51□□□□□ -1.05
HDAC4-206ENST00000460235 GAS8-AS1O95177 125 aa8.51□□□□□ -1.05
HDAC4-206ENST00000460235 TTC32Q5I0X7 151 aa8.51□□□□□ -1.05
HDAC4-206ENST00000460235 AMMECR1LQ6DCA0 310 aa8.51□□□□□ -1.05
HDAC4-206ENST00000460235 TMEM101Q96IK0 257 aa8.51□□□□□ -1.05
HDAC4-206ENST00000460235 AP5S1Q9NUS5 200 aa8.51□□□□□ -1.05
HDAC4-206ENST00000460235 LINC00588Q9Y4M8 146 aa8.51□□□□□ -1.05
HDAC4-206ENST00000460235 TSHBP01222 138 aa8.5□□□□□ -1.05
HDAC4-206ENST00000460235 LINC00614P0C842 121 aa8.5□□□□□ -1.05
HDAC4-206ENST00000460235 ZNF25P17030 456 aaPredicted RBP8.5□□□□□ -1.05
HDAC4-206ENST00000460235 Q0VG73 95 aa8.5□□□□□ -1.05
HDAC4-206ENST00000460235 DGAT2L7PQ6IED9 249 aa8.5□□□□□ -1.05
HDAC4-206ENST00000460235 C18orf32Q8TCD1 76 aa8.5□□□□□ -1.05
HDAC4-206ENST00000460235 CHCHD1Q96BP2 118 aaKnown RBP8.5□□□□□ -1.05
HDAC4-206ENST00000460235 Q9H8V8 135 aa8.5□□□□□ -1.05
HDAC4-206ENST00000460235 LY6G6CO95867 125 aa8.49□□□□□ -1.05
HDAC4-206ENST00000460235 IFI27P40305 119 aaPredicted RBP8.49□□□□□ -1.05
HDAC4-206ENST00000460235 PAPPA-AS1Q5QFB9 102 aa8.49□□□□□ -1.05
HDAC4-206ENST00000460235 CYSLTR1Q9Y271 337 aa8.49□□□□□ -1.05
HDAC4-206ENST00000460235 A0A1B0GUV1 79 aa8.48□□□□□ -1.05
HDAC4-206ENST00000460235 LINC01556Q5JQF7 62 aa8.48□□□□□ -1.05
HDAC4-206ENST00000460235 IGLV2-18A0A075B6J9 118 aa8.47□□□□□ -1.05
HDAC4-206ENST00000460235 LINC01546A6NGU7 62 aa8.47□□□□□ -1.05
HDAC4-206ENST00000460235 HSBP1O75506 76 aa8.47□□□□□ -1.05
HDAC4-206ENST00000460235 NPSP0C0P6 89 aa8.47□□□□□ -1.05
HDAC4-206ENST00000460235 DNAH10OSP0CZ25 163 aa8.47□□□□□ -1.05
HDAC4-206ENST00000460235 ESDP10768 282 aa8.47□□□□□ -1.05
HDAC4-206ENST00000460235 BTF3P20290 206 aaKnown RBP8.47□□□□□ -1.05
HDAC4-206ENST00000460235 RNASEKQ6P5S7 137 aaKnown RBP8.47□□□□□ -1.05
HDAC4-206ENST00000460235 NTM-AS1Q6ZSK4 140 aa8.47□□□□□ -1.05
HDAC4-206ENST00000460235 NIT1Q86X76 327 aa8.47□□□□□ -1.05
HDAC4-206ENST00000460235 C20orf203Q8NBC4 194 aa8.47□□□□□ -1.05
HDAC4-206ENST00000460235 LINC00476Q8WZB0 136 aa8.47□□□□□ -1.05
HDAC4-206ENST00000460235 TIMM21Q9BVV7 248 aa8.47□□□□□ -1.05
HDAC4-206ENST00000460235 SPANXA1Q9NS26 97 aa8.47□□□□□ -1.05
HDAC4-206ENST00000460235 GAGE6Q13070 117 aa8.46□□□□□ -1.06
HDAC4-206ENST00000460235 OR5A1Q8NGJ0 315 aa8.46□□□□□ -1.06
HDAC4-206ENST00000460235 CSDC2Q9Y534 153 aaKnown RBP8.46□□□□□ -1.06
HDAC4-206ENST00000460235 FGF6P10767 208 aa8.45□□□□□ -1.06
HDAC4-206ENST00000460235 Q6ZN92 141 aa8.45□□□□□ -1.06
HDAC4-206ENST00000460235 MRPL52Q86TS9 123 aaKnown RBP8.45□□□□□ -1.06
HDAC4-206ENST00000460235 TRAV8-3A0A0A6YYJ7 113 aa8.44□□□□□ -1.06
HDAC4-206ENST00000460235 HIST1H2BKO60814 126 aa8.44□□□□□ -1.06
HDAC4-206ENST00000460235 HBDP02042 147 aa8.44□□□□□ -1.06
HDAC4-206ENST00000460235 CRPP02741 224 aa8.44□□□□□ -1.06
HDAC4-206ENST00000460235 S100A6P06703 90 aa8.44□□□□□ -1.06
HDAC4-206ENST00000460235 HIST1H2BJP06899 126 aa8.44□□□□□ -1.06
HDAC4-206ENST00000460235 HIST1H2BOP23527 126 aa8.44□□□□□ -1.06
HDAC4-206ENST00000460235 HIST1H2BBP33778 126 aa8.44□□□□□ -1.06
HDAC4-206ENST00000460235 HIST1H2BDP58876 126 aa8.44□□□□□ -1.06
HDAC4-206ENST00000460235 HIST1H2BCP62807 126 aa8.44□□□□□ -1.06
HDAC4-206ENST00000460235 HIST2H2BEQ16778 126 aa8.44□□□□□ -1.06
HDAC4-206ENST00000460235 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.44□□□□□ -1.06
HDAC4-206ENST00000460235 C2orf66Q6UXQ4 117 aa8.44□□□□□ -1.06
HDAC4-206ENST00000460235 WFDC10BQ8IUB3 73 aa8.44□□□□□ -1.06
HDAC4-206ENST00000460235 HIST1H2BHQ93079 126 aa8.44□□□□□ -1.06
HDAC4-206ENST00000460235 RMI2Q96E14 147 aa8.44□□□□□ -1.06
HDAC4-206ENST00000460235 HIST1H2BNQ99877 126 aa8.44□□□□□ -1.06
HDAC4-206ENST00000460235 HIST1H2BMQ99879 126 aa8.44□□□□□ -1.06
HDAC4-206ENST00000460235 PYGO1Q9Y3Y4 419 aa8.44□□□□□ -1.06
HDAC4-206ENST00000460235 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.43□□□□□ -1.06
HDAC4-206ENST00000460235 IGKV2-29A2NJV5 120 aaPredicted RBP8.43□□□□□ -1.06
HDAC4-206ENST00000460235 CCL25O15444 150 aa8.43□□□□□ -1.06
HDAC4-206ENST00000460235 ATP5LO75964 103 aa8.43□□□□□ -1.06
HDAC4-206ENST00000460235 ANGP03950 147 aaKnown RBP8.43□□□□□ -1.06
HDAC4-206ENST00000460235 NFE4Q86UQ8 179 aa8.43□□□□□ -1.06
HDAC4-206ENST00000460235 TMEM141Q96I45 108 aa8.43□□□□□ -1.06
HDAC4-206ENST00000460235 COX11Q9Y6N1 276 aa8.43□□□□□ -1.06
HDAC4-206ENST00000460235 LCE6AA0A183 80 aa8.42□□□□□ -1.06
HDAC4-206ENST00000460235 IGHV3-30P01768 117 aa8.42□□□□□ -1.06
HDAC4-206ENST00000460235 IGHV3-33P01772 117 aa8.42□□□□□ -1.06
HDAC4-206ENST00000460235 IGHV3-30-3P0DP02 117 aa8.42□□□□□ -1.06
HDAC4-206ENST00000460235 IGHV3-30-5P0DP03 117 aa8.42□□□□□ -1.06
HDAC4-206ENST00000460235 RBX1P62877 108 aa8.42□□□□□ -1.06
HDAC4-206ENST00000460235 ERASQ7Z444 233 aa8.42□□□□□ -1.06
HDAC4-206ENST00000460235 DEFB104AQ8WTQ1 72 aa8.42□□□□□ -1.06
HDAC4-206ENST00000460235 TOMM6Q96B49 74 aa8.42□□□□□ -1.06
HDAC4-206ENST00000460235 SCGB3A1Q96QR1 104 aa8.42□□□□□ -1.06
HDAC4-206ENST00000460235 NBDYA0A0U1RRE5 68 aa8.41□□□□□ -1.06
HDAC4-206ENST00000460235 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.41□□□□□ -1.06
HDAC4-206ENST00000460235 MRPS36P82909 103 aaKnown RBP8.41□□□□□ -1.06
HDAC4-206ENST00000460235 MPV17L2Q567V2 206 aa8.41□□□□□ -1.06
HDAC4-206ENST00000460235 ZNF664Q8N3J9 261 aa8.41□□□□□ -1.06
HDAC4-206ENST00000460235 TIMM17AQ99595 171 aa8.41□□□□□ -1.06
HDAC4-206ENST00000460235 C2orf88Q9BSF0 95 aa8.41□□□□□ -1.06
HDAC4-206ENST00000460235 TM2D2Q9BX73 214 aa8.41□□□□□ -1.06
HDAC4-206ENST00000460235 UBE2D4Q9Y2X8 147 aa8.41□□□□□ -1.06
HDAC4-206ENST00000460235 TRAV8-4A0A0B4J246 113 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms