RNA–Protein interactions for RNA: ENST00000460170.2

PTPRU-205, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 1 (best) BASIC

Gene PTPRU, Length 5,337 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-205ENST00000460170 CLPSL1A2RUU4 121 aa11.07□□□□□ -0.64
PTPRU-205ENST00000460170 DSCR8Q96T75 97 aa11.07□□□□□ -0.64
PTPRU-205ENST00000460170 ANKRD11Q6UB99 2663 aaPredicted RBP11.06□□□□□ -0.64
PTPRU-205ENST00000460170 ACYP1P07311 99 aa11.06□□□□□ -0.64
PTPRU-205ENST00000460170 C10orf99Q6UWK7 81 aa11.06□□□□□ -0.64
PTPRU-205ENST00000460170 ESM1Q9NQ30 184 aa11.06□□□□□ -0.64
PTPRU-205ENST00000460170 DEFB114Q30KQ6 69 aa11.06□□□□□ -0.64
PTPRU-205ENST00000460170 CRYBA4P53673 196 aa11.05□□□□□ -0.64
PTPRU-205ENST00000460170 G3V4G9 280 aa11.05□□□□□ -0.64
PTPRU-205ENST00000460170 RMI2Q96E14 147 aa11.05□□□□□ -0.64
PTPRU-205ENST00000460170 SMIM20Q8N5G0 67 aa11.05□□□□□ -0.64
PTPRU-205ENST00000460170 IGKV2D-24A0A075B6R9 120 aa11.04□□□□□ -0.64
PTPRU-205ENST00000460170 M0QY20 66 aa11.04□□□□□ -0.64
PTPRU-205ENST00000460170 NRACQ8N912 160 aa11.04□□□□□ -0.64
PTPRU-205ENST00000460170 PSMB8P28062 276 aa11.04□□□□□ -0.64
PTPRU-205ENST00000460170 Q6ZTI0 123 aa11.04□□□□□ -0.64
PTPRU-205ENST00000460170 MAPKAPK5-AS1Q8N8E1 139 aa11.04□□□□□ -0.64
PTPRU-205ENST00000460170 TRBV10-2A0A0K0K1G8 114 aa11.04□□□□□ -0.64
PTPRU-205ENST00000460170 A0A0J9YXY3 114 aa11.04□□□□□ -0.64
PTPRU-205ENST00000460170 TRACP01848 142 aa11.04□□□□□ -0.64
PTPRU-205ENST00000460170 PRR9Q5T870 116 aa11.04□□□□□ -0.64
PTPRU-205ENST00000460170 MRPS12O15235 138 aaKnown RBP11.03□□□□□ -0.64
PTPRU-205ENST00000460170 RNASE3P12724 160 aaKnown RBP11.03□□□□□ -0.64
PTPRU-205ENST00000460170 DEFB135Q30KP9 77 aa11.03□□□□□ -0.64
PTPRU-205ENST00000460170 C1orf43Q9BWL3 253 aa11.03□□□□□ -0.64
PTPRU-205ENST00000460170 NFE4Q86UQ8 179 aa11.03□□□□□ -0.64
PTPRU-205ENST00000460170 H3BT86 120 aa11.02□□□□□ -0.64
PTPRU-205ENST00000460170 MIAQ16674 131 aa11.02□□□□□ -0.64
PTPRU-205ENST00000460170 PTH2Q96A98 100 aa11.02□□□□□ -0.64
PTPRU-205ENST00000460170 TNRC6BQ9UPQ9 1833 aaKnown RBP11.02□□□□□ -0.65
PTPRU-205ENST00000460170 IGLV4-3A0A075B6K6 122 aa11.02□□□□□ -0.65
PTPRU-205ENST00000460170 ZNF22P17026 224 aaPredicted RBP11.02□□□□□ -0.65
PTPRU-205ENST00000460170 MIR7-3HGQ8N6C7 128 aa11.02□□□□□ -0.65
PTPRU-205ENST00000460170 CLEC2BQ92478 149 aa11.02□□□□□ -0.65
PTPRU-205ENST00000460170 CNFNQ9BYD5 112 aa11.02□□□□□ -0.65
PTPRU-205ENST00000460170 PRO0255Q9UI72 69 aa11.02□□□□□ -0.65
PTPRU-205ENST00000460170 TRBV27A0A0K0K1C4 114 aa11.01□□□□□ -0.65
PTPRU-205ENST00000460170 TMEM126AQ9H061 195 aa11.01□□□□□ -0.65
PTPRU-205ENST00000460170 IGHV4-4A0A075B6R2 117 aa11.01□□□□□ -0.65
PTPRU-205ENST00000460170 CAMK2N2Q96S95 79 aa11.01□□□□□ -0.65
PTPRU-205ENST00000460170 LINC00467Q9BRT7 94 aa11.01□□□□□ -0.65
PTPRU-205ENST00000460170 CEP350Q5VT06 3117 aa11.01□□□□□ -0.65
PTPRU-205ENST00000460170 TRBV6-5A0A0K0K1A5 114 aa11□□□□□ -0.65
PTPRU-205ENST00000460170 GAS8-AS1O95177 125 aa11□□□□□ -0.65
PTPRU-205ENST00000460170 TCL1BO95988 128 aa11□□□□□ -0.65
PTPRU-205ENST00000460170 C2orf91Q6ZV80 131 aa11□□□□□ -0.65
PTPRU-205ENST00000460170 USP9XQ93008 2570 aaPredicted RBP11□□□□□ -0.65
PTPRU-205ENST00000460170 A0A0B4J2C4 111 aa11□□□□□ -0.65
PTPRU-205ENST00000460170 KLLNB2CW77 178 aa11□□□□□ -0.65
PTPRU-205ENST00000460170 DEFB4AO15263 64 aa11□□□□□ -0.65
PTPRU-205ENST00000460170 RS1O15537 224 aa11□□□□□ -0.65
PTPRU-205ENST00000460170 IGLV1-40P01703 118 aa11□□□□□ -0.65
PTPRU-205ENST00000460170 INSL3P51460 131 aa11□□□□□ -0.65
PTPRU-205ENST00000460170 Q6ZS46 218 aa11□□□□□ -0.65
PTPRU-205ENST00000460170 WFDC11Q8NEX6 87 aa11□□□□□ -0.65
PTPRU-205ENST00000460170 Q9HAA7 133 aa11□□□□□ -0.65
PTPRU-205ENST00000460170 CDKN2A-AS1Q9UH64 79 aa11□□□□□ -0.65
PTPRU-205ENST00000460170 URB1-AS1Q96HZ7 61 aa10.99□□□□□ -0.65
PTPRU-205ENST00000460170 IGHV3-30P01768 117 aa10.99□□□□□ -0.65
PTPRU-205ENST00000460170 IGHV3-33P01772 117 aa10.99□□□□□ -0.65
PTPRU-205ENST00000460170 IGHV3-30-5P0DP03 117 aa10.99□□□□□ -0.65
PTPRU-205ENST00000460170 TMEM223A0PJW6 202 aa10.99□□□□□ -0.65
PTPRU-205ENST00000460170 Q8N976 141 aa10.99□□□□□ -0.65
PTPRU-205ENST00000460170 Q6ZSV7 163 aa10.99□□□□□ -0.65
PTPRU-205ENST00000460170 PSMG3-AS1Q96PY0 264 aa10.99□□□□□ -0.65
PTPRU-205ENST00000460170 TLN2Q9Y4G6 2542 aa10.98□□□□□ -0.65
PTPRU-205ENST00000460170 CXCL5P42830 114 aa10.98□□□□□ -0.65
PTPRU-205ENST00000460170 CFAP126Q5VTH2 177 aa10.98□□□□□ -0.65
PTPRU-205ENST00000460170 SPANXB1Q9NS25 103 aaPredicted RBP10.98□□□□□ -0.65
PTPRU-205ENST00000460170 ZNF702PQ9H963 129 aa10.97□□□□□ -0.65
PTPRU-205ENST00000460170 LECT2O14960 151 aa10.97□□□□□ -0.65
PTPRU-205ENST00000460170 USP9YO00507 2555 aaPredicted RBP10.96□□□□□ -0.65
PTPRU-205ENST00000460170 UTRNP46939 3433 aa10.96□□□□□ -0.65
PTPRU-205ENST00000460170 POLR2KP53803 58 aaKnown RBP10.96□□□□□ -0.66
PTPRU-205ENST00000460170 DCANP1Q8TF63 244 aa10.96□□□□□ -0.66
PTPRU-205ENST00000460170 PROK1P58294 105 aa10.96□□□□□ -0.66
PTPRU-205ENST00000460170 CDK2AP2O75956 126 aa10.95□□□□□ -0.66
PTPRU-205ENST00000460170 SPAG11BQ08648 103 aa10.95□□□□□ -0.66
PTPRU-205ENST00000460170 F8W735 103 aaPredicted RBP10.95□□□□□ -0.66
PTPRU-205ENST00000460170 RBMY1FQ15415 496 aaKnown RBP10.95□□□□□ -0.66
PTPRU-205ENST00000460170 ZMAT4Q9H898 229 aa10.95□□□□□ -0.66
PTPRU-205ENST00000460170 KLK12Q9UKR0 248 aa10.95□□□□□ -0.66
PTPRU-205ENST00000460170 PYGO1Q9Y3Y4 419 aa10.95□□□□□ -0.66
PTPRU-205ENST00000460170 NDUFA1O15239 70 aa10.94□□□□□ -0.66
PTPRU-205ENST00000460170 C9orf85Q96MD7 179 aa10.94□□□□□ -0.66
PTPRU-205ENST00000460170 TSHBP01222 138 aa10.93□□□□□ -0.66
PTPRU-205ENST00000460170 CRYGDP07320 174 aa10.93□□□□□ -0.66
PTPRU-205ENST00000460170 RBM3P98179 157 aaKnown RBP10.93□□□□□ -0.66
PTPRU-205ENST00000460170 AVPP01185 164 aa10.93□□□□□ -0.66
PTPRU-205ENST00000460170 A0A1W2PPR1 153 aa10.92□□□□□ -0.66
PTPRU-205ENST00000460170 SPANXCQ9NY87 97 aa10.92□□□□□ -0.66
PTPRU-205ENST00000460170 PRRC2AP48634 2157 aaKnown RBP10.92□□□□□ -0.66
PTPRU-205ENST00000460170 TIRAPP58753 221 aa10.92□□□□□ -0.66
PTPRU-205ENST00000460170 HIST2H2BDQ6DRA6 164 aa10.91□□□□□ -0.66
PTPRU-205ENST00000460170 COX8CQ7Z4L0 72 aa10.91□□□□□ -0.66
PTPRU-205ENST00000460170 NCR3O14931 201 aa10.91□□□□□ -0.66
PTPRU-205ENST00000460170 JMJD7-PLA2G4BH0Y9G9 81 aa10.91□□□□□ -0.66
PTPRU-205ENST00000460170 RPL18AQ02543 176 aaKnown RBP10.91□□□□□ -0.66
PTPRU-205ENST00000460170 DEFB105AQ8NG35 78 aa10.91□□□□□ -0.66
PTPRU-205ENST00000460170 H7C423 109 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms