RNA–Protein interactions for RNA: ENST00000459990.5

SYN3-205, Transcript of synapsin III, humanhuman

TSL 4

Gene SYN3, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-205ENST00000459990 CTRLP40313 264 aa6.16□□□□□ -1.42
SYN3-205ENST00000459990 RGS21Q2M5E4 152 aa6.16□□□□□ -1.42
SYN3-205ENST00000459990 HIGD2BQ4VC39 106 aa6.16□□□□□ -1.42
SYN3-205ENST00000459990 Q6ZNX1 250 aa6.16□□□□□ -1.42
SYN3-205ENST00000459990 PRSS3P2Q8NHM4 247 aa6.16□□□□□ -1.42
SYN3-205ENST00000459990 RNF185Q96GF1 192 aa6.16□□□□□ -1.42
SYN3-205ENST00000459990 DPH3P1Q9H4G8 78 aa6.16□□□□□ -1.42
SYN3-205ENST00000459990 MANBALQ9NQG1 85 aa6.16□□□□□ -1.42
SYN3-205ENST00000459990 NIT2Q9NQR4 276 aa6.16□□□□□ -1.42
SYN3-205ENST00000459990 IGKV3OR2-268A0A0C4DH90 116 aa6.15□□□□□ -1.42
SYN3-205ENST00000459990 NTF3P20783 257 aa6.15□□□□□ -1.42
SYN3-205ENST00000459990 AMTP48728 403 aa6.15□□□□□ -1.42
SYN3-205ENST00000459990 CACNG7P62955 275 aa6.15□□□□□ -1.42
SYN3-205ENST00000459990 PRR3P79522 188 aaKnown RBP6.15□□□□□ -1.42
SYN3-205ENST00000459990 COX6A2Q02221 97 aa6.15□□□□□ -1.42
SYN3-205ENST00000459990 GATD1Q8NB37 220 aa6.15□□□□□ -1.42
SYN3-205ENST00000459990 CNFNQ9BYD5 112 aa6.15□□□□□ -1.42
SYN3-205ENST00000459990 A0A096LNI7 61 aa6.14□□□□□ -1.43
SYN3-205ENST00000459990 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.14□□□□□ -1.43
SYN3-205ENST00000459990 TRAV1-1A0A0B4J248 108 aa6.14□□□□□ -1.43
SYN3-205ENST00000459990 IGKV2-24A0A0C4DH68 120 aa6.14□□□□□ -1.43
SYN3-205ENST00000459990 KANTRA0A1W2PQU2 76 aa6.14□□□□□ -1.43
SYN3-205ENST00000459990 K7EN84 100 aa6.14□□□□□ -1.43
SYN3-205ENST00000459990 GNG4P50150 75 aa6.14□□□□□ -1.43
SYN3-205ENST00000459990 FOXA3P55318 350 aaPredicted RBP6.14□□□□□ -1.43
SYN3-205ENST00000459990 RPS20P60866 119 aaKnown RBP6.14□□□□□ -1.43
SYN3-205ENST00000459990 RPL39LQ96EH5 51 aaKnown RBP6.14□□□□□ -1.43
SYN3-205ENST00000459990 AP5S1Q9NUS5 200 aa6.14□□□□□ -1.43
SYN3-205ENST00000459990 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.13□□□□□ -1.43
SYN3-205ENST00000459990 GVQW2A0A096LPI5 108 aaPredicted RBP6.13□□□□□ -1.43
SYN3-205ENST00000459990 IGKV2-29A2NJV5 120 aaPredicted RBP6.13□□□□□ -1.43
SYN3-205ENST00000459990 UBE2L6O14933 153 aa6.13□□□□□ -1.43
SYN3-205ENST00000459990 TRGC1P0CF51 173 aa6.13□□□□□ -1.43
SYN3-205ENST00000459990 SULT1A2P50226 295 aa6.13□□□□□ -1.43
SYN3-205ENST00000459990 MEF2BQ02080 365 aaPredicted RBP6.13□□□□□ -1.43
SYN3-205ENST00000459990 FOXI1Q12951 378 aa6.13□□□□□ -1.43
SYN3-205ENST00000459990 COTL1Q14019 142 aa6.13□□□□□ -1.43
SYN3-205ENST00000459990 WDR73Q6P4I2 378 aa6.13□□□□□ -1.43
SYN3-205ENST00000459990 C9orf62Q8N4C0 152 aa6.13□□□□□ -1.43
SYN3-205ENST00000459990 SMIM12Q96EX1 92 aa6.13□□□□□ -1.43
SYN3-205ENST00000459990 F2Z2F3 143 aa6.12□□□□□ -1.43
SYN3-205ENST00000459990 NDUFS6O75380 124 aaKnown RBP6.12□□□□□ -1.43
SYN3-205ENST00000459990 GAS8-AS1O95177 125 aa6.12□□□□□ -1.43
SYN3-205ENST00000459990 IFNA1P01562 189 aa6.12□□□□□ -1.43
SYN3-205ENST00000459990 MAJINQ3KP22 176 aa6.12□□□□□ -1.43
SYN3-205ENST00000459990 NUDT10Q8NFP7 164 aa6.12□□□□□ -1.43
SYN3-205ENST00000459990 LYPD6BQ8NI32 183 aa6.12□□□□□ -1.43
SYN3-205ENST00000459990 GTSF1Q8WW33 167 aa6.12□□□□□ -1.43
SYN3-205ENST00000459990 CHCHD10Q8WYQ3 142 aaPredicted RBP6.12□□□□□ -1.43
SYN3-205ENST00000459990 LINC00526Q96FQ7 95 aa6.12□□□□□ -1.43
SYN3-205ENST00000459990 NUDT11Q96G61 164 aa6.12□□□□□ -1.43
SYN3-205ENST00000459990 LINC01600Q96MT4 127 aa6.12□□□□□ -1.43
SYN3-205ENST00000459990 RNASE7Q9H1E1 156 aaKnown RBP6.12□□□□□ -1.43
SYN3-205ENST00000459990 LPAP08519 4548 aa6.12□□□□□ -1.43
SYN3-205ENST00000459990 BCL2P10415 239 aa6.11□□□□□ -1.43
SYN3-205ENST00000459990 RPS10P46783 165 aaKnown RBP6.11□□□□□ -1.43
SYN3-205ENST00000459990 STPG4Q8N801 248 aa6.11□□□□□ -1.43
SYN3-205ENST00000459990 XKRY2A2RUG3 117 aa6.1□□□□□ -1.43
SYN3-205ENST00000459990 FAM231BA6NCW3 169 aa6.1□□□□□ -1.43
SYN3-205ENST00000459990 PDE6DO43924 150 aa6.1□□□□□ -1.43
SYN3-205ENST00000459990 FGF6P10767 208 aa6.1□□□□□ -1.43
SYN3-205ENST00000459990 TWIST1Q15672 202 aa6.1□□□□□ -1.43
SYN3-205ENST00000459990 C7orf33Q8WU49 177 aa6.1□□□□□ -1.43
SYN3-205ENST00000459990 RPP21Q9H633 154 aaKnown RBP6.1□□□□□ -1.43
SYN3-205ENST00000459990 MED9Q9NWA0 146 aa6.1□□□□□ -1.43
SYN3-205ENST00000459990 SDHAF1A6NFY7 115 aa6.09□□□□□ -1.43
SYN3-205ENST00000459990 KRTAP10-8P60410 259 aa6.09□□□□□ -1.43
SYN3-205ENST00000459990 EIF5AP63241 154 aaKnown RBP6.09□□□□□ -1.43
SYN3-205ENST00000459990 RNASEKQ6P5S7 137 aaKnown RBP6.09□□□□□ -1.43
SYN3-205ENST00000459990 A0A0J9YXV3 536 aa6.08□□□□□ -1.44
SYN3-205ENST00000459990 CCL25O15444 150 aa6.08□□□□□ -1.44
SYN3-205ENST00000459990 NCR2O95944 276 aa6.08□□□□□ -1.44
SYN3-205ENST00000459990 APCSP02743 223 aa6.08□□□□□ -1.44
SYN3-205ENST00000459990 XCL1P47992 114 aa6.08□□□□□ -1.44
SYN3-205ENST00000459990 AMMECR1LQ6DCA0 310 aa6.08□□□□□ -1.44
SYN3-205ENST00000459990 CFAP161Q6P656 301 aa6.08□□□□□ -1.44
SYN3-205ENST00000459990 OR5A1Q8NGJ0 315 aa6.08□□□□□ -1.44
SYN3-205ENST00000459990 OCC1Q8TAD7 63 aa6.08□□□□□ -1.44
SYN3-205ENST00000459990 LINC00959A0A1B0GUT2 108 aa6.07□□□□□ -1.44
SYN3-205ENST00000459990 TSHBP01222 138 aa6.07□□□□□ -1.44
SYN3-205ENST00000459990 ESDP10768 282 aa6.07□□□□□ -1.44
SYN3-205ENST00000459990 SRSF9Q13242 221 aaKnown RBP eCLIP6.07□□□□□ -1.44
SYN3-205ENST00000459990 TMEM242Q9NWH2 141 aa6.07□□□□□ -1.44
SYN3-205ENST00000459990 TRBV6-5A0A0K0K1A5 114 aa6.06□□□□□ -1.44
SYN3-205ENST00000459990 H7C423 109 aa6.06□□□□□ -1.44
SYN3-205ENST00000459990 CARD19Q96LW7 228 aa6.06□□□□□ -1.44
SYN3-205ENST00000459990 BIN3Q9NQY0 253 aa6.06□□□□□ -1.44
SYN3-205ENST00000459990 ZNF25P17030 456 aaPredicted RBP6.05□□□□□ -1.44
SYN3-205ENST00000459990 SPINK6Q6UWN8 80 aa6.05□□□□□ -1.44
SYN3-205ENST00000459990 IGHV1-58A0A0C4DH39 117 aa6.04□□□□□ -1.44
SYN3-205ENST00000459990 A0A1W2PNN7 141 aa6.04□□□□□ -1.44
SYN3-205ENST00000459990 TEX46H3BTG2 121 aa6.04□□□□□ -1.44
SYN3-205ENST00000459990 I3L3M4 83 aa6.04□□□□□ -1.44
SYN3-205ENST00000459990 PTTG1IPP53801 180 aa6.04□□□□□ -1.44
SYN3-205ENST00000459990 MRPL52Q86TS9 123 aaKnown RBP6.04□□□□□ -1.44
SYN3-205ENST00000459990 CDC42SE2Q9NRR3 84 aa6.04□□□□□ -1.44
SYN3-205ENST00000459990 PMCHP20382 165 aa6.03□□□□□ -1.44
SYN3-205ENST00000459990 POLR2KP53803 58 aaKnown RBP6.03□□□□□ -1.44
SYN3-205ENST00000459990 SYCNQ0VAF6 134 aa6.03□□□□□ -1.44
SYN3-205ENST00000459990 RNASE13Q5GAN3 156 aaKnown RBP6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms