RNA–Protein interactions for RNA: ENST00000459667.1

VARS-218, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 793 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-218ENST00000459667 RAB4AP20338 218 aa13.79□□□□□ -0.2
VARS-218ENST00000459667 HBBP68871 147 aa13.79□□□□□ -0.2
VARS-218ENST00000459667 MRPL54Q6P161 138 aaKnown RBP13.79□□□□□ -0.2
VARS-218ENST00000459667 ATRAIDQ6UW56 229 aa13.79□□□□□ -0.2
VARS-218ENST00000459667 Q8N976 141 aa13.79□□□□□ -0.2
VARS-218ENST00000459667 RNF185Q96GF1 192 aa13.79□□□□□ -0.2
VARS-218ENST00000459667 SEC11CQ9BY50 192 aa13.79□□□□□ -0.2
VARS-218ENST00000459667 PPP1R17O96001 155 aa13.78□□□□□ -0.2
VARS-218ENST00000459667 CRPP02741 224 aa13.78□□□□□ -0.2
VARS-218ENST00000459667 ADCYAP1P18509 176 aa13.78□□□□□ -0.2
VARS-218ENST00000459667 Q0VG73 95 aa13.78□□□□□ -0.2
VARS-218ENST00000459667 DEFB104AQ8WTQ1 72 aa13.78□□□□□ -0.2
VARS-218ENST00000459667 TMEM243Q9BU79 118 aa13.78□□□□□ -0.2
VARS-218ENST00000459667 TRBV6-5A0A0K0K1A5 114 aa13.77□□□□□ -0.21
VARS-218ENST00000459667 SDHAF1A6NFY7 115 aa13.77□□□□□ -0.21
VARS-218ENST00000459667 CDK2AP2O75956 126 aa13.77□□□□□ -0.21
VARS-218ENST00000459667 ATP5L2Q7Z4Y8 100 aa13.77□□□□□ -0.21
VARS-218ENST00000459667 Q8N814 137 aa13.77□□□□□ -0.21
VARS-218ENST00000459667 ST20Q9HBF5 79 aa13.77□□□□□ -0.21
VARS-218ENST00000459667 NCR2O95944 276 aa13.76□□□□□ -0.21
VARS-218ENST00000459667 AMTP48728 403 aa13.76□□□□□ -0.21
VARS-218ENST00000459667 RBX1P62877 108 aa13.76□□□□□ -0.21
VARS-218ENST00000459667 FAM104BQ5XKR9 115 aa13.76□□□□□ -0.21
VARS-218ENST00000459667 ENHOQ6UWT2 76 aa13.76□□□□□ -0.21
VARS-218ENST00000459667 UBE2L6O14933 153 aa13.75□□□□□ -0.21
VARS-218ENST00000459667 WFDC2Q14508 124 aa13.75□□□□□ -0.21
VARS-218ENST00000459667 MAPKAPK5-AS1Q8N8E1 139 aa13.75□□□□□ -0.21
VARS-218ENST00000459667 A0A1B0GXF2 115 aa13.74□□□□□ -0.21
VARS-218ENST00000459667 I3L3M4 83 aa13.74□□□□□ -0.21
VARS-218ENST00000459667 LECT2O14960 151 aa13.74□□□□□ -0.21
VARS-218ENST00000459667 PMCHP20382 165 aa13.74□□□□□ -0.21
VARS-218ENST00000459667 NTN5Q8WTR8 489 aaPredicted RBP13.74□□□□□ -0.21
VARS-218ENST00000459667 CTDSP1Q9GZU7 261 aa13.74□□□□□ -0.21
VARS-218ENST00000459667 IGLV5-52A0A0A0MRZ9 124 aa13.73□□□□□ -0.21
VARS-218ENST00000459667 APCSP02743 223 aa13.73□□□□□ -0.21
VARS-218ENST00000459667 MRPL51Q4U2R6 128 aaKnown RBP13.73□□□□□ -0.21
VARS-218ENST00000459667 BAALCQ8WXS3 180 aa13.73□□□□□ -0.21
VARS-218ENST00000459667 C1orf43Q9BWL3 253 aa13.73□□□□□ -0.21
VARS-218ENST00000459667 GAS8-AS1O95177 125 aa13.72□□□□□ -0.21
VARS-218ENST00000459667 CLPSL2Q6UWE3 100 aa13.72□□□□□ -0.21
VARS-218ENST00000459667 IMMP2LQ96T52 175 aa13.72□□□□□ -0.21
VARS-218ENST00000459667 TMEM70Q9BUB7 260 aa13.72□□□□□ -0.21
VARS-218ENST00000459667 SMKR1H3BMG3 65 aa13.71□□□□□ -0.21
VARS-218ENST00000459667 CKS2P33552 79 aa13.71□□□□□ -0.21
VARS-218ENST00000459667 RPS10P46783 165 aaKnown RBP13.71□□□□□ -0.21
VARS-218ENST00000459667 MIAQ16674 131 aa13.71□□□□□ -0.21
VARS-218ENST00000459667 LINC00269Q8N2A0 174 aa13.71□□□□□ -0.21
VARS-218ENST00000459667 BTF3L4Q96K17 158 aa13.71□□□□□ -0.21
VARS-218ENST00000459667 PRR34Q9NV39 138 aa13.71□□□□□ -0.21
VARS-218ENST00000459667 GCSHP23434 173 aa13.7□□□□□ -0.22
VARS-218ENST00000459667 A0A1B0GUV1 79 aa13.69□□□□□ -0.22
VARS-218ENST00000459667 VCYO14598 125 aa13.69□□□□□ -0.22
VARS-218ENST00000459667 PPBPP02775 128 aa13.69□□□□□ -0.22
VARS-218ENST00000459667 KRTAP10-1P60331 282 aa13.69□□□□□ -0.22
VARS-218ENST00000459667 SUMO2P61956 95 aaKnown RBP13.69□□□□□ -0.22
VARS-218ENST00000459667 C20orf203Q8NBC4 194 aa13.69□□□□□ -0.22
VARS-218ENST00000459667 CARHSP1Q9Y2V2 147 aaKnown RBP13.69□□□□□ -0.22
VARS-218ENST00000459667 APOBP04114 4563 aaKnown RBP13.69□□□□□ -0.22
VARS-218ENST00000459667 IGLV4-60A0A075B6I1 120 aa13.68□□□□□ -0.22
VARS-218ENST00000459667 TRBV27A0A0K0K1C4 114 aa13.68□□□□□ -0.22
VARS-218ENST00000459667 POLR2KP53803 58 aaKnown RBP13.68□□□□□ -0.22
VARS-218ENST00000459667 REG3AQ06141 175 aa13.68□□□□□ -0.22
VARS-218ENST00000459667 C10orf91Q5T1B1 145 aa13.68□□□□□ -0.22
VARS-218ENST00000459667 NRACQ8N912 160 aa13.68□□□□□ -0.22
VARS-218ENST00000459667 H7C423 109 aa13.67□□□□□ -0.22
VARS-218ENST00000459667 S100PP25815 95 aa13.67□□□□□ -0.22
VARS-218ENST00000459667 AMMECR1LQ6DCA0 310 aa13.67□□□□□ -0.22
VARS-218ENST00000459667 KIR2DL4Q99706 377 aa13.67□□□□□ -0.22
VARS-218ENST00000459667 C20orf78Q9BR46 151 aa13.67□□□□□ -0.22
VARS-218ENST00000459667 TMEM242Q9NWH2 141 aa13.67□□□□□ -0.22
VARS-218ENST00000459667 HSPG2P98160 4391 aa13.67□□□□□ -0.22
VARS-218ENST00000459667 IGLV2-33A0A075B6J2 118 aaPredicted RBP13.66□□□□□ -0.22
VARS-218ENST00000459667 D6R8Y8 96 aa13.66□□□□□ -0.22
VARS-218ENST00000459667 HLA-DQA1P01909 254 aa13.66□□□□□ -0.22
VARS-218ENST00000459667 NDUFA5Q16718 116 aa13.66□□□□□ -0.22
VARS-218ENST00000459667 TRAV9-1A0A075B6T8 112 aa13.65□□□□□ -0.22
VARS-218ENST00000459667 TSHBP01222 138 aa13.65□□□□□ -0.22
VARS-218ENST00000459667 FCER1GP30273 86 aa13.65□□□□□ -0.22
VARS-218ENST00000459667 RHEBQ15382 184 aa13.65□□□□□ -0.22
VARS-218ENST00000459667 ORMDL3Q8N138 153 aa13.65□□□□□ -0.22
VARS-218ENST00000459667 TRBV24-1A0A075B6N3 115 aa13.64□□□□□ -0.23
VARS-218ENST00000459667 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.64□□□□□ -0.23
VARS-218ENST00000459667 IGKV2-29A2NJV5 120 aaPredicted RBP13.64□□□□□ -0.23
VARS-218ENST00000459667 PHOX2AO14813 284 aa13.64□□□□□ -0.23
VARS-218ENST00000459667 TNFRSF6BO95407 300 aa13.64□□□□□ -0.23
VARS-218ENST00000459667 C7orf77A4D0Y5 90 aa13.63□□□□□ -0.23
VARS-218ENST00000459667 TCAPO15273 167 aa13.63□□□□□ -0.23
VARS-218ENST00000459667 RPL32P62910 135 aaKnown RBP13.63□□□□□ -0.23
VARS-218ENST00000459667 RNASEKQ6P5S7 137 aaKnown RBP13.63□□□□□ -0.23
VARS-218ENST00000459667 TMEM136Q6ZRR5 245 aa13.63□□□□□ -0.23
VARS-218ENST00000459667 CLRN3Q8NCR9 226 aa13.63□□□□□ -0.23
VARS-218ENST00000459667 RPS10P5Q9NQ39 176 aa13.63□□□□□ -0.23
VARS-218ENST00000459667 IGLV10-54A0A075B6I4 117 aa13.62□□□□□ -0.23
VARS-218ENST00000459667 ZNF25P17030 456 aaPredicted RBP13.62□□□□□ -0.23
VARS-218ENST00000459667 KRTAP26-1Q6PEX3 210 aa13.62□□□□□ -0.23
VARS-218ENST00000459667 TRAV8-4A0A0B4J246 113 aa13.61□□□□□ -0.23
VARS-218ENST00000459667 FGF6P10767 208 aa13.61□□□□□ -0.23
VARS-218ENST00000459667 ESDP10768 282 aa13.61□□□□□ -0.23
VARS-218ENST00000459667 SMAGPQ0VAQ4 97 aa13.61□□□□□ -0.23
VARS-218ENST00000459667 C14orf177Q52M58 125 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 122 ms