RNA–Protein interactions for RNA: ENST00000459639.5

U2AF1-204, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best) BASIC

Gene U2AF1, Length 1,675 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-204ENST00000459639 GAGE5Q13069 117 aa17.22■□□□□ 0.35
U2AF1-204ENST00000459639 GAGE13Q4V321 117 aa17.22■□□□□ 0.35
U2AF1-204ENST00000459639 PHLDA1Q8WV24 401 aaPredicted RBP17.22■□□□□ 0.35
U2AF1-204ENST00000459639 H0Y8G0 127 aa17.21■□□□□ 0.35
U2AF1-204ENST00000459639 COTL1Q14019 142 aa17.21■□□□□ 0.35
U2AF1-204ENST00000459639 DEFB121Q5J5C9 76 aa17.21■□□□□ 0.35
U2AF1-204ENST00000459639 LINC01545Q5VT33 79 aa17.21■□□□□ 0.35
U2AF1-204ENST00000459639 TEX43Q6ZNM6 134 aa17.21■□□□□ 0.35
U2AF1-204ENST00000459639 C20orf203Q8NBC4 194 aa17.21■□□□□ 0.35
U2AF1-204ENST00000459639 SPATA25Q9BR10 227 aa17.21■□□□□ 0.35
U2AF1-204ENST00000459639 IGHV3-38A0A0C4DH36 116 aa17.2■□□□□ 0.34
U2AF1-204ENST00000459639 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP17.2■□□□□ 0.34
U2AF1-204ENST00000459639 ATP5G1P05496 136 aa17.2■□□□□ 0.34
U2AF1-204ENST00000459639 CRYBA4P53673 196 aa17.2■□□□□ 0.34
U2AF1-204ENST00000459639 S100A12P80511 92 aa17.2■□□□□ 0.34
U2AF1-204ENST00000459639 ERASQ7Z444 233 aa17.2■□□□□ 0.34
U2AF1-204ENST00000459639 PRO0255Q9UI72 69 aa17.2■□□□□ 0.34
U2AF1-204ENST00000459639 TM2D3Q9BRN9 247 aa17.2■□□□□ 0.34
U2AF1-204ENST00000459639 LOC100131303A0A0U1RQF7 123 aa17.19■□□□□ 0.34
U2AF1-204ENST00000459639 LINC00694P0DN24 101 aa17.19■□□□□ 0.34
U2AF1-204ENST00000459639 RPL39P62891 51 aaKnown RBP17.19■□□□□ 0.34
U2AF1-204ENST00000459639 LGALS9CQ6DKI2 356 aa17.18■□□□□ 0.34
U2AF1-204ENST00000459639 TIMM17AQ99595 171 aa17.17■□□□□ 0.34
U2AF1-204ENST00000459639 ZMAT4Q9H898 229 aa17.17■□□□□ 0.34
U2AF1-204ENST00000459639 IGIPA6NJ69 53 aa17.16■□□□□ 0.34
U2AF1-204ENST00000459639 PRSS1P07477 247 aa17.16■□□□□ 0.34
U2AF1-204ENST00000459639 Q6ZN92 141 aa17.16■□□□□ 0.34
U2AF1-204ENST00000459639 CHCHD7Q9BUK0 85 aa17.16■□□□□ 0.34
U2AF1-204ENST00000459639 TMEM141Q96I45 108 aa17.16■□□□□ 0.34
U2AF1-204ENST00000459639 C12orf74Q32Q52 190 aa17.14■□□□□ 0.33
U2AF1-204ENST00000459639 PAX4O43316 350 aa17.13■□□□□ 0.33
U2AF1-204ENST00000459639 GTSF1LQ9H1H1 148 aa17.13■□□□□ 0.33
U2AF1-204ENST00000459639 TRAV12-1A0A0B4J245 112 aa17.13■□□□□ 0.33
U2AF1-204ENST00000459639 GYPEP15421 78 aa17.13■□□□□ 0.33
U2AF1-204ENST00000459639 MRAPQ8TCY5 172 aa17.13■□□□□ 0.33
U2AF1-204ENST00000459639 VAMP8Q9BV40 100 aa17.13■□□□□ 0.33
U2AF1-204ENST00000459639 A0A0J9YWU9 116 aa17.12■□□□□ 0.33
U2AF1-204ENST00000459639 ODF1Q14990 250 aa17.12■□□□□ 0.33
U2AF1-204ENST00000459639 ATOH7Q8N100 152 aa17.12■□□□□ 0.33
U2AF1-204ENST00000459639 BAALCQ8WXS3 180 aa17.12■□□□□ 0.33
U2AF1-204ENST00000459639 PMCHL2Q9BQD1 86 aa17.11■□□□□ 0.33
U2AF1-204ENST00000459639 PYGO1Q9Y3Y4 419 aa17.11■□□□□ 0.33
U2AF1-204ENST00000459639 F5H768 121 aa17.1■□□□□ 0.33
U2AF1-204ENST00000459639 NTM-AS1Q6ZSK4 140 aa17.1■□□□□ 0.33
U2AF1-204ENST00000459639 VSIG2Q96IQ7 327 aa17.1■□□□□ 0.33
U2AF1-204ENST00000459639 A0A087WX48 190 aa17.1■□□□□ 0.33
U2AF1-204ENST00000459639 NPSP0C0P6 89 aa17.09■□□□□ 0.33
U2AF1-204ENST00000459639 TMEM97Q5BJF2 176 aa17.09■□□□□ 0.33
U2AF1-204ENST00000459639 TRAV9-2A0A087WT02 112 aa17.08■□□□□ 0.32
U2AF1-204ENST00000459639 ZNF664Q8N3J9 261 aa17.08■□□□□ 0.32
U2AF1-204ENST00000459639 SPANXA1Q9NS26 97 aa17.08■□□□□ 0.32
U2AF1-204ENST00000459639 IGKV2D-29A0A075B6S2 120 aaPredicted RBP17.07■□□□□ 0.32
U2AF1-204ENST00000459639 IGKV2-29A2NJV5 120 aaPredicted RBP17.07■□□□□ 0.32
U2AF1-204ENST00000459639 HTN3P15516 51 aa17.07■□□□□ 0.32
U2AF1-204ENST00000459639 ATP6V0E2Q8NHE4 81 aa17.07■□□□□ 0.32
U2AF1-204ENST00000459639 TRAV26-1A0A087WT03 109 aa17.07■□□□□ 0.32
U2AF1-204ENST00000459639 UBE2D4Q9Y2X8 147 aa17.07■□□□□ 0.32
U2AF1-204ENST00000459639 PAM16Q9Y3D7 125 aa17.07■□□□□ 0.32
U2AF1-204ENST00000459639 A0A0J9YY99 117 aa17.06■□□□□ 0.32
U2AF1-204ENST00000459639 TIMM21Q9BVV7 248 aa17.06■□□□□ 0.32
U2AF1-204ENST00000459639 IGLV4-3A0A075B6K6 122 aa17.05■□□□□ 0.32
U2AF1-204ENST00000459639 TRBV25-1A0A075B6N4 114 aa17.05■□□□□ 0.32
U2AF1-204ENST00000459639 PMVKQ15126 192 aa17.05■□□□□ 0.32
U2AF1-204ENST00000459639 PAPPA-AS1Q5QFB9 102 aa17.05■□□□□ 0.32
U2AF1-204ENST00000459639 TMEM243Q9BU79 118 aa17.05■□□□□ 0.32
U2AF1-204ENST00000459639 F8VRH5 84 aa17.04■□□□□ 0.32
U2AF1-204ENST00000459639 PKIAP61925 76 aa17.04■□□□□ 0.32
U2AF1-204ENST00000459639 C11orf45Q8TAV5 145 aa17.04■□□□□ 0.32
U2AF1-204ENST00000459639 MRPL35Q9NZE8 188 aaKnown RBP17.04■□□□□ 0.32
U2AF1-204ENST00000459639 TENM3Q9P273 2699 aa17.04■□□□□ 0.32
U2AF1-204ENST00000459639 TRBV6-8A0A0A6YYG3 113 aa17.04■□□□□ 0.32
U2AF1-204ENST00000459639 PRSS29PA6NIE9 313 aa17.04■□□□□ 0.32
U2AF1-204ENST00000459639 DPM2O94777 84 aa17.04■□□□□ 0.32
U2AF1-204ENST00000459639 Q6ZTC4 211 aa17.04■□□□□ 0.32
U2AF1-204ENST00000459639 CHTOPQ9Y3Y2 248 aaKnown RBP17.04■□□□□ 0.32
U2AF1-204ENST00000459639 SMAGPQ0VAQ4 97 aa17.03■□□□□ 0.32
U2AF1-204ENST00000459639 MAJINQ3KP22 176 aa17.03■□□□□ 0.32
U2AF1-204ENST00000459639 SPATA45Q537H7 98 aa17.03■□□□□ 0.32
U2AF1-204ENST00000459639 HSBP1L1C9JCN9 74 aa17.02■□□□□ 0.32
U2AF1-204ENST00000459639 TSTD3H0UI37 97 aa17.02■□□□□ 0.32
U2AF1-204ENST00000459639 H7C423 109 aa17.02■□□□□ 0.32
U2AF1-204ENST00000459639 IGKCP01834 107 aa17.02■□□□□ 0.32
U2AF1-204ENST00000459639 MRPL52Q86TS9 123 aaKnown RBP17.02■□□□□ 0.32
U2AF1-204ENST00000459639 OPRPNQ99935 248 aaPredicted RBP17.02■□□□□ 0.32
U2AF1-204ENST00000459639 B9D2Q9BPU9 175 aa17.02■□□□□ 0.32
U2AF1-204ENST00000459639 CST9LQ9H4G1 147 aa17.02■□□□□ 0.32
U2AF1-204ENST00000459639 PLNP26678 52 aa17.01■□□□□ 0.31
U2AF1-204ENST00000459639 hDV102S1A0JD36 115 aa17.01■□□□□ 0.31
U2AF1-204ENST00000459639 MRPL23Q16540 153 aaKnown RBP17.01■□□□□ 0.31
U2AF1-204ENST00000459639 CEMP1Q6PRD7 247 aaPredicted RBP17.01■□□□□ 0.31
U2AF1-204ENST00000459639 SH2D6Q7Z4S9 175 aa17.01■□□□□ 0.31
U2AF1-204ENST00000459639 FAM104AQ969W3 186 aa17.01■□□□□ 0.31
U2AF1-204ENST00000459639 PRO1933Q9H354 126 aa17.01■□□□□ 0.31
U2AF1-204ENST00000459639 ICOSQ9Y6W8 199 aa17.01■□□□□ 0.31
U2AF1-204ENST00000459639 H3BNG1 76 aa17■□□□□ 0.31
U2AF1-204ENST00000459639 UBE2L6O14933 153 aa17■□□□□ 0.31
U2AF1-204ENST00000459639 NANOS2P60321 138 aaKnown RBP17■□□□□ 0.31
U2AF1-204ENST00000459639 MRPS36P82909 103 aaKnown RBP17■□□□□ 0.31
U2AF1-204ENST00000459639 CSDC2Q9Y534 153 aaKnown RBP17■□□□□ 0.31
U2AF1-204ENST00000459639 AMELXQ99217 191 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 141.9 ms