RNA–Protein interactions for RNA: ENST00000458610.6

CD28-203, Transcript of CD28 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD28, Length 705 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD28-203ENST00000458610 AMN1Q8IY45 258 aa10.78□□□□□ -0.68
CD28-203ENST00000458610 RNF185Q96GF1 192 aa10.78□□□□□ -0.68
CD28-203ENST00000458610 DNAH17Q9UFH2 4485 aa10.78□□□□□ -0.68
CD28-203ENST00000458610 KRTAP10-2P60368 255 aa10.77□□□□□ -0.69
CD28-203ENST00000458610 HBBP68871 147 aa10.77□□□□□ -0.69
CD28-203ENST00000458610 MIAQ16674 131 aa10.77□□□□□ -0.69
CD28-203ENST00000458610 FAM104BQ5XKR9 115 aa10.77□□□□□ -0.69
CD28-203ENST00000458610 Q8N976 141 aa10.77□□□□□ -0.69
CD28-203ENST00000458610 C1orf43Q9BWL3 253 aa10.77□□□□□ -0.69
CD28-203ENST00000458610 DNAH2Q9P225 4427 aa10.76□□□□□ -0.69
CD28-203ENST00000458610 LRCOL1A6NCL2 159 aa10.76□□□□□ -0.69
CD28-203ENST00000458610 H7C423 109 aa10.76□□□□□ -0.69
CD28-203ENST00000458610 APCSP02743 223 aa10.76□□□□□ -0.69
CD28-203ENST00000458610 ATP5L2Q7Z4Y8 100 aa10.76□□□□□ -0.69
CD28-203ENST00000458610 NTN5Q8WTR8 489 aaPredicted RBP10.76□□□□□ -0.69
CD28-203ENST00000458610 FRAS1Q86XX4 4008 aa10.75□□□□□ -0.69
CD28-203ENST00000458610 TMEM218A2RU14 115 aa10.75□□□□□ -0.69
CD28-203ENST00000458610 VCYO14598 125 aa10.75□□□□□ -0.69
CD28-203ENST00000458610 ENHOQ6UWT2 76 aa10.75□□□□□ -0.69
CD28-203ENST00000458610 AMMECR1LQ6DCA0 310 aa10.74□□□□□ -0.69
CD28-203ENST00000458610 MRPL54Q6P161 138 aaKnown RBP10.74□□□□□ -0.69
CD28-203ENST00000458610 LINC00269Q8N2A0 174 aa10.74□□□□□ -0.69
CD28-203ENST00000458610 TMEM70Q9BUB7 260 aa10.74□□□□□ -0.69
CD28-203ENST00000458610 PRR34Q9NV39 138 aa10.74□□□□□ -0.69
CD28-203ENST00000458610 CKS2P33552 79 aa10.73□□□□□ -0.69
CD28-203ENST00000458610 POLR2KP53803 58 aaKnown RBP10.73□□□□□ -0.69
CD28-203ENST00000458610 Q8N814 137 aa10.73□□□□□ -0.69
CD28-203ENST00000458610 DEFB104AQ8WTQ1 72 aa10.73□□□□□ -0.69
CD28-203ENST00000458610 FAT2Q9NYQ8 4349 aa10.72□□□□□ -0.69
CD28-203ENST00000458610 TRAV8-4A0A0B4J246 113 aa10.72□□□□□ -0.69
CD28-203ENST00000458610 TRBV27A0A0K0K1C4 114 aa10.72□□□□□ -0.69
CD28-203ENST00000458610 A0A1B0GXF2 115 aa10.72□□□□□ -0.69
CD28-203ENST00000458610 CDK2AP2O75956 126 aa10.72□□□□□ -0.69
CD28-203ENST00000458610 PPBPP02775 128 aa10.72□□□□□ -0.69
CD28-203ENST00000458610 SUMO2P61956 95 aaKnown RBP10.72□□□□□ -0.69
CD28-203ENST00000458610 REG3AQ06141 175 aa10.72□□□□□ -0.69
CD28-203ENST00000458610 MRPL51Q4U2R6 128 aaKnown RBP10.72□□□□□ -0.69
CD28-203ENST00000458610 BAALCQ8WXS3 180 aa10.72□□□□□ -0.69
CD28-203ENST00000458610 C20orf78Q9BR46 151 aa10.72□□□□□ -0.69
CD28-203ENST00000458610 SEC11CQ9BY50 192 aa10.72□□□□□ -0.69
CD28-203ENST00000458610 CTDSP1Q9GZU7 261 aa10.72□□□□□ -0.69
CD28-203ENST00000458610 IGLV5-52A0A0A0MRZ9 124 aa10.71□□□□□ -0.69
CD28-203ENST00000458610 FCER1GP30273 86 aa10.71□□□□□ -0.69
CD28-203ENST00000458610 RPS10P46783 165 aaKnown RBP10.71□□□□□ -0.69
CD28-203ENST00000458610 SMAGPQ0VAQ4 97 aa10.71□□□□□ -0.69
CD28-203ENST00000458610 C14orf177Q52M58 125 aa10.71□□□□□ -0.69
CD28-203ENST00000458610 BTF3L4Q96K17 158 aa10.71□□□□□ -0.69
CD28-203ENST00000458610 IMMP2LQ96T52 175 aa10.71□□□□□ -0.69
CD28-203ENST00000458610 KIR2DL4Q99706 377 aa10.71□□□□□ -0.69
CD28-203ENST00000458610 SMKR1H3BMG3 65 aa10.7□□□□□ -0.7
CD28-203ENST00000458610 TCAPO15273 167 aa10.7□□□□□ -0.7
CD28-203ENST00000458610 GAS8-AS1O95177 125 aa10.7□□□□□ -0.7
CD28-203ENST00000458610 ZNF25P17030 456 aaPredicted RBP10.7□□□□□ -0.7
CD28-203ENST00000458610 GCSHP23434 173 aa10.7□□□□□ -0.7
CD28-203ENST00000458610 RNASEKQ6P5S7 137 aaKnown RBP10.7□□□□□ -0.7
CD28-203ENST00000458610 C20orf203Q8NBC4 194 aa10.7□□□□□ -0.7
CD28-203ENST00000458610 TMEM101Q96IK0 257 aa10.7□□□□□ -0.7
CD28-203ENST00000458610 TRBV24-1A0A075B6N3 115 aa10.69□□□□□ -0.7
CD28-203ENST00000458610 TSHBP01222 138 aa10.69□□□□□ -0.7
CD28-203ENST00000458610 MAPKAPK5-AS1Q8N8E1 139 aa10.69□□□□□ -0.7
CD28-203ENST00000458610 NRACQ8N912 160 aa10.69□□□□□ -0.7
CD28-203ENST00000458610 TMEM242Q9NWH2 141 aa10.69□□□□□ -0.7
CD28-203ENST00000458610 HECTD4Q9Y4D8 3996 aa10.68□□□□□ -0.7
CD28-203ENST00000458610 IGLV4-60A0A075B6I1 120 aa10.68□□□□□ -0.7
CD28-203ENST00000458610 PHOX2AO14813 284 aa10.68□□□□□ -0.7
CD28-203ENST00000458610 FGF6P10767 208 aa10.68□□□□□ -0.7
CD28-203ENST00000458610 ESDP10768 282 aa10.68□□□□□ -0.7
CD28-203ENST00000458610 RPL32P62910 135 aaKnown RBP10.68□□□□□ -0.7
CD28-203ENST00000458610 CLPSL2Q6UWE3 100 aa10.68□□□□□ -0.7
CD28-203ENST00000458610 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.67□□□□□ -0.7
CD28-203ENST00000458610 IGKV2-29A2NJV5 120 aaPredicted RBP10.67□□□□□ -0.7
CD28-203ENST00000458610 C7orf77A4D0Y5 90 aa10.67□□□□□ -0.7
CD28-203ENST00000458610 LECT2O14960 151 aa10.67□□□□□ -0.7
CD28-203ENST00000458610 TNFRSF6BO95407 300 aa10.67□□□□□ -0.7
CD28-203ENST00000458610 ADCYAP1P18509 176 aa10.67□□□□□ -0.7
CD28-203ENST00000458610 ORMDL3Q8N138 153 aa10.67□□□□□ -0.7
CD28-203ENST00000458610 TMEM18Q96B42 140 aa10.67□□□□□ -0.7
CD28-203ENST00000458610 D6R8Y8 96 aa10.66□□□□□ -0.7
CD28-203ENST00000458610 HLA-DQA1P01909 254 aa10.66□□□□□ -0.7
CD28-203ENST00000458610 DGAT2L7PQ6IED9 249 aa10.66□□□□□ -0.7
CD28-203ENST00000458610 TMEM136Q6ZRR5 245 aa10.66□□□□□ -0.7
CD28-203ENST00000458610 OR5A1Q8NGJ0 315 aa10.66□□□□□ -0.7
CD28-203ENST00000458610 TRAV9-1A0A075B6T8 112 aa10.65□□□□□ -0.7
CD28-203ENST00000458610 S100PP25815 95 aa10.65□□□□□ -0.7
CD28-203ENST00000458610 FUSP35637 526 aaKnown RBP eCLIP10.65□□□□□ -0.7
CD28-203ENST00000458610 WFDC2Q14508 124 aa10.65□□□□□ -0.7
CD28-203ENST00000458610 MRPL52Q86TS9 123 aaKnown RBP10.64□□□□□ -0.71
CD28-203ENST00000458610 LAMTOR2Q9Y2Q5 125 aa10.64□□□□□ -0.71
CD28-203ENST00000458610 PKD1P98161 4303 aa10.64□□□□□ -0.71
CD28-203ENST00000458610 IGLV10-54A0A075B6I4 117 aa10.63□□□□□ -0.71
CD28-203ENST00000458610 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.63□□□□□ -0.71
CD28-203ENST00000458610 C10orf91Q5T1B1 145 aa10.63□□□□□ -0.71
CD28-203ENST00000458610 CLRN3Q8NCR9 226 aa10.63□□□□□ -0.71
CD28-203ENST00000458610 PRELID3AQ96N28 172 aa10.63□□□□□ -0.71
CD28-203ENST00000458610 USP17L23D6RBM5 183 aa10.62□□□□□ -0.71
CD28-203ENST00000458610 NPYP01303 97 aa10.62□□□□□ -0.71
CD28-203ENST00000458610 RAB5AP20339 215 aa10.62□□□□□ -0.71
CD28-203ENST00000458610 SMIM2Q9BVW6 85 aa10.62□□□□□ -0.71
CD28-203ENST00000458610 CARHSP1Q9Y2V2 147 aaKnown RBP10.62□□□□□ -0.71
CD28-203ENST00000458610 CSDC2Q9Y534 153 aaKnown RBP10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms