RNA–Protein interactions for RNA: ENST00000458034.1

RFX3-211, Transcript of regulatory factor X3, humanhuman

TSL 3

Gene RFX3, Length 814 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-211ENST00000458034 CFC1P0CG37 223 aa7.96□□□□□ -1.14
RFX3-211ENST00000458034 Q6ZSV7 163 aa7.96□□□□□ -1.14
RFX3-211ENST00000458034 BBC3Q96PG8 261 aaPredicted RBP7.96□□□□□ -1.14
RFX3-211ENST00000458034 ITPR1Q14643 2758 aa7.96□□□□□ -1.14
RFX3-211ENST00000458034 IGHV1-58A0A0C4DH39 117 aa7.95□□□□□ -1.14
RFX3-211ENST00000458034 PROK1P58294 105 aa7.95□□□□□ -1.14
RFX3-211ENST00000458034 CHCHD7Q9BUK0 85 aa7.95□□□□□ -1.14
RFX3-211ENST00000458034 UBE2D4Q9Y2X8 147 aa7.95□□□□□ -1.14
RFX3-211ENST00000458034 SPG11Q96JI7 2443 aa7.94□□□□□ -1.14
RFX3-211ENST00000458034 A0A0J9YXY3 114 aa7.94□□□□□ -1.14
RFX3-211ENST00000458034 DNAJC9-AS1A6NH13 148 aa7.94□□□□□ -1.14
RFX3-211ENST00000458034 SCGB1C2P0DMR2 95 aa7.94□□□□□ -1.14
RFX3-211ENST00000458034 IGHV3-30-3P0DP02 117 aa7.94□□□□□ -1.14
RFX3-211ENST00000458034 SCGB1A1P11684 91 aa7.94□□□□□ -1.14
RFX3-211ENST00000458034 ETDBQ3ZM63 59 aa7.94□□□□□ -1.14
RFX3-211ENST00000458034 C1QTNF4Q9BXJ3 329 aa7.94□□□□□ -1.14
RFX3-211ENST00000458034 GEMIN7Q9H840 131 aaKnown RBP7.94□□□□□ -1.14
RFX3-211ENST00000458034 YAE1D1Q9NRH1 226 aa7.94□□□□□ -1.14
RFX3-211ENST00000458034 ERG28Q9UKR5 140 aa7.94□□□□□ -1.14
RFX3-211ENST00000458034 CSMD1Q96PZ7 3565 aa7.94□□□□□ -1.14
RFX3-211ENST00000458034 IGHV3-64A0A075B6Q5 118 aa7.93□□□□□ -1.14
RFX3-211ENST00000458034 TRBV10-1A0A0K0K1A3 114 aa7.93□□□□□ -1.14
RFX3-211ENST00000458034 A4D1N5 150 aa7.93□□□□□ -1.14
RFX3-211ENST00000458034 CCL24O00175 119 aa7.93□□□□□ -1.14
RFX3-211ENST00000458034 TIRAPP58753 221 aa7.93□□□□□ -1.14
RFX3-211ENST00000458034 FHL3Q13643 280 aa7.93□□□□□ -1.14
RFX3-211ENST00000458034 DGAT2L7PQ6IED9 249 aa7.93□□□□□ -1.14
RFX3-211ENST00000458034 MUSTN1Q8IVN3 82 aa7.93□□□□□ -1.14
RFX3-211ENST00000458034 SIGMAR1Q99720 223 aa7.93□□□□□ -1.14
RFX3-211ENST00000458034 SPANXDQ9BXN6 97 aa7.93□□□□□ -1.14
RFX3-211ENST00000458034 SPANXCQ9NY87 97 aa7.93□□□□□ -1.14
RFX3-211ENST00000458034 TIMM17BO60830 172 aa7.92□□□□□ -1.14
RFX3-211ENST00000458034 AZU1P20160 251 aa7.92□□□□□ -1.14
RFX3-211ENST00000458034 RPL36AP83881 106 aaKnown RBP7.92□□□□□ -1.14
RFX3-211ENST00000458034 ODF3L2Q3SX64 289 aa7.92□□□□□ -1.14
RFX3-211ENST00000458034 Q6ZUT4 128 aa7.92□□□□□ -1.14
RFX3-211ENST00000458034 SH2D6Q7Z4S9 175 aa7.92□□□□□ -1.14
RFX3-211ENST00000458034 IL17DQ8TAD2 202 aa7.92□□□□□ -1.14
RFX3-211ENST00000458034 TMEM263Q8WUH6 116 aaKnown RBP7.92□□□□□ -1.14
RFX3-211ENST00000458034 RPL36ALQ969Q0 106 aaKnown RBP7.92□□□□□ -1.14
RFX3-211ENST00000458034 SPATA25Q9BR10 227 aa7.92□□□□□ -1.14
RFX3-211ENST00000458034 XCL2Q9UBD3 114 aa7.92□□□□□ -1.14
RFX3-211ENST00000458034 TSSC4Q9Y5U2 329 aaPredicted RBP7.92□□□□□ -1.14
RFX3-211ENST00000458034 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.91□□□□□ -1.14
RFX3-211ENST00000458034 TRAV4A0A0B4J268 109 aa7.91□□□□□ -1.14
RFX3-211ENST00000458034 IGKV2-29A2NJV5 120 aaPredicted RBP7.91□□□□□ -1.14
RFX3-211ENST00000458034 GAGE12HA6NDE8 117 aa7.91□□□□□ -1.14
RFX3-211ENST00000458034 M0QXV9 152 aa7.91□□□□□ -1.14
RFX3-211ENST00000458034 CIDEAO60543 219 aa7.91□□□□□ -1.14
RFX3-211ENST00000458034 TCL1BO95988 128 aa7.91□□□□□ -1.14
RFX3-211ENST00000458034 IGHV3-33P01772 117 aa7.91□□□□□ -1.14
RFX3-211ENST00000458034 Q1RN00 199 aa7.91□□□□□ -1.14
RFX3-211ENST00000458034 Q6ZSN1 163 aa7.91□□□□□ -1.14
RFX3-211ENST00000458034 PPDPFLQ8WWR9 84 aa7.91□□□□□ -1.14
RFX3-211ENST00000458034 VSIG2Q96IQ7 327 aa7.91□□□□□ -1.14
RFX3-211ENST00000458034 NDUFA12Q9UI09 145 aa7.91□□□□□ -1.14
RFX3-211ENST00000458034 PIEZO1Q92508 2521 aa7.91□□□□□ -1.14
RFX3-211ENST00000458034 TRGV1A0A0A0MS02 117 aa7.9□□□□□ -1.14
RFX3-211ENST00000458034 K7EQD1 137 aa7.9□□□□□ -1.14
RFX3-211ENST00000458034 IFITM1P13164 125 aa7.9□□□□□ -1.14
RFX3-211ENST00000458034 HERVK_113P63121 156 aa7.9□□□□□ -1.14
RFX3-211ENST00000458034 FOXI1Q12951 378 aa7.9□□□□□ -1.14
RFX3-211ENST00000458034 DAZ2Q13117 558 aaKnown RBP7.9□□□□□ -1.14
RFX3-211ENST00000458034 MIAQ16674 131 aa7.9□□□□□ -1.14
RFX3-211ENST00000458034 DAZ4Q86SG3 579 aaKnown RBP7.9□□□□□ -1.14
RFX3-211ENST00000458034 SBSPONQ8IVN8 264 aa7.9□□□□□ -1.14
RFX3-211ENST00000458034 C1orf158Q8N1D5 194 aa7.9□□□□□ -1.14
RFX3-211ENST00000458034 ZNF418Q8TF45 676 aaPredicted RBP7.9□□□□□ -1.14
RFX3-211ENST00000458034 COPS9Q8WXC6 57 aa7.9□□□□□ -1.14
RFX3-211ENST00000458034 RNF183Q96D59 192 aa7.9□□□□□ -1.14
RFX3-211ENST00000458034 C16orf95Q9H693 158 aa7.9□□□□□ -1.14
RFX3-211ENST00000458034 DAZ3Q9NR90 486 aaKnown RBP7.9□□□□□ -1.14
RFX3-211ENST00000458034 SORL1Q92673 2214 aa7.9□□□□□ -1.15
RFX3-211ENST00000458034 USP9XQ93008 2570 aaPredicted RBP7.89□□□□□ -1.15
RFX3-211ENST00000458034 IGLV5-45A0A087WSX0 123 aa7.89□□□□□ -1.15
RFX3-211ENST00000458034 IGHV3-38A0A0C4DH36 116 aa7.89□□□□□ -1.15
RFX3-211ENST00000458034 A0A1W2PRX2 142 aa7.89□□□□□ -1.15
RFX3-211ENST00000458034 PRM2P04554 102 aa7.89□□□□□ -1.15
RFX3-211ENST00000458034 CIRBPQ14011 172 aaKnown RBP7.89□□□□□ -1.15
RFX3-211ENST00000458034 ATXN8Q156A1 80 aa7.89□□□□□ -1.15
RFX3-211ENST00000458034 ZFAND6Q6FIF0 208 aa7.89□□□□□ -1.15
RFX3-211ENST00000458034 CEMP1Q6PRD7 247 aaPredicted RBP7.89□□□□□ -1.15
RFX3-211ENST00000458034 TEN1Q86WV5 123 aa7.89□□□□□ -1.15
RFX3-211ENST00000458034 MTURNQ8N3F0 131 aa7.89□□□□□ -1.15
RFX3-211ENST00000458034 FAM104AQ969W3 186 aa7.89□□□□□ -1.15
RFX3-211ENST00000458034 FAM110AQ9BQ89 295 aa7.89□□□□□ -1.15
RFX3-211ENST00000458034 IGHV3OR16-12A0A075B7B8 117 aa7.88□□□□□ -1.15
RFX3-211ENST00000458034 TRAV8-3A0A0A6YYJ7 113 aa7.88□□□□□ -1.15
RFX3-211ENST00000458034 NDUFA1O15239 70 aa7.88□□□□□ -1.15
RFX3-211ENST00000458034 RNASE1P07998 156 aaKnown RBP7.88□□□□□ -1.15
RFX3-211ENST00000458034 SPINK8P0C7L1 97 aa7.88□□□□□ -1.15
RFX3-211ENST00000458034 RNASE13Q5GAN3 156 aaKnown RBP7.88□□□□□ -1.15
RFX3-211ENST00000458034 SFTA2Q6UW10 78 aa7.88□□□□□ -1.15
RFX3-211ENST00000458034 FAM19A3Q7Z5A8 133 aa7.88□□□□□ -1.15
RFX3-211ENST00000458034 C16orf74Q96GX8 76 aa7.88□□□□□ -1.15
RFX3-211ENST00000458034 CSDC2Q9Y534 153 aaKnown RBP7.88□□□□□ -1.15
RFX3-211ENST00000458034 TRBV30A0A0K0K1B3 111 aa7.87□□□□□ -1.15
RFX3-211ENST00000458034 COX6CP09669 75 aa7.87□□□□□ -1.15
RFX3-211ENST00000458034 WFDC11Q8NEX6 87 aa7.87□□□□□ -1.15
RFX3-211ENST00000458034 LITAFQ99732 161 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms