RNA–Protein interactions for RNA: ENST00000458013.6

SNX27-204, Transcript of sorting nexin family member 27, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SNX27, Length 6,403 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-204ENST00000458013 MAPKAPK5-AS1Q8N8E1 139 aa14.77□□□□□ -0.05
SNX27-204ENST00000458013 IGLC6P0CF74 106 aa14.76□□□□□ -0.05
SNX27-204ENST00000458013 C20orf197Q8N268 126 aa14.76□□□□□ -0.05
SNX27-204ENST00000458013 CDKN2A-AS1Q9UH64 79 aa14.76□□□□□ -0.05
SNX27-204ENST00000458013 C18orf65Q6ZTR6 163 aa14.75□□□□□ -0.05
SNX27-204ENST00000458013 IGHV4-30-4P0DP06 118 aa14.75□□□□□ -0.05
SNX27-204ENST00000458013 IGHV4-31P0DP07 118 aa14.75□□□□□ -0.05
SNX27-204ENST00000458013 Q6ZPA2 131 aa14.75□□□□□ -0.05
SNX27-204ENST00000458013 Q6ZSR3 168 aa14.74□□□□□ -0.05
SNX27-204ENST00000458013 WNK2Q9Y3S1 2297 aa14.74□□□□□ -0.05
SNX27-204ENST00000458013 LOC100131303A0A0U1RQF7 123 aa14.74□□□□□ -0.05
SNX27-204ENST00000458013 WFDC10AQ9H1F0 79 aa14.74□□□□□ -0.05
SNX27-204ENST00000458013 DEFB131BA0A096LNP1 70 aa14.73□□□□□ -0.05
SNX27-204ENST00000458013 C11orf1Q9H5F2 150 aa14.73□□□□□ -0.05
SNX27-204ENST00000458013 SPINK6Q6UWN8 80 aa14.73□□□□□ -0.05
SNX27-204ENST00000458013 ROS1P08922 2347 aa14.73□□□□□ -0.05
SNX27-204ENST00000458013 TMEM223A0PJW6 202 aa14.72□□□□□ -0.05
SNX27-204ENST00000458013 BRWD1-AS2P59051 145 aa14.72□□□□□ -0.05
SNX27-204ENST00000458013 DAZAP2Q15038 168 aaPredicted RBP14.72□□□□□ -0.05
SNX27-204ENST00000458013 SNURFQ9Y675 71 aa14.72□□□□□ -0.05
SNX27-204ENST00000458013 H3BT86 120 aa14.72□□□□□ -0.05
SNX27-204ENST00000458013 C1orf158Q8N1D5 194 aa14.72□□□□□ -0.05
SNX27-204ENST00000458013 NUP210LQ5VU65 1888 aa14.72□□□□□ -0.05
SNX27-204ENST00000458013 DOPEY2Q9Y3R5 2298 aa14.72□□□□□ -0.05
SNX27-204ENST00000458013 C2orf16Q68DN1 1984 aa14.72□□□□□ -0.05
SNX27-204ENST00000458013 H3BQ85 93 aa14.72□□□□□ -0.05
SNX27-204ENST00000458013 MED13Q9UHV7 2174 aa14.71□□□□□ -0.05
SNX27-204ENST00000458013 PRR4Q16378 134 aa14.71□□□□□ -0.05
SNX27-204ENST00000458013 Q8N976 141 aa14.71□□□□□ -0.05
SNX27-204ENST00000458013 TMEM131Q92545 1883 aa14.71□□□□□ -0.05
SNX27-204ENST00000458013 RPL37AP8A6NKH3 93 aa14.7□□□□□ -0.06
SNX27-204ENST00000458013 A0A1B0GXF2 115 aa14.7□□□□□ -0.06
SNX27-204ENST00000458013 CFAP126Q5VTH2 177 aa14.7□□□□□ -0.06
SNX27-204ENST00000458013 TRIAP1O43715 76 aa14.69□□□□□ -0.06
SNX27-204ENST00000458013 CRIP1P50238 77 aa14.69□□□□□ -0.06
SNX27-204ENST00000458013 ODF3BA8MYP8 253 aa14.69□□□□□ -0.06
SNX27-204ENST00000458013 IGLV4-3A0A075B6K6 122 aa14.69□□□□□ -0.06
SNX27-204ENST00000458013 C3orf22Q8N5N4 141 aa14.69□□□□□ -0.06
SNX27-204ENST00000458013 DSCAML1Q8TD84 2053 aa14.69□□□□□ -0.06
SNX27-204ENST00000458013 SPTBN2O15020 2390 aa14.69□□□□□ -0.06
SNX27-204ENST00000458013 ABCA4P78363 2273 aa14.68□□□□□ -0.06
SNX27-204ENST00000458013 UFSP1Q6NVU6 142 aa14.68□□□□□ -0.06
SNX27-204ENST00000458013 USP17L23D6RBM5 183 aa14.68□□□□□ -0.06
SNX27-204ENST00000458013 Q6YL49 198 aa14.68□□□□□ -0.06
SNX27-204ENST00000458013 BBC3Q96PG8 261 aaPredicted RBP14.68□□□□□ -0.06
SNX27-204ENST00000458013 DEFB114Q30KQ6 69 aa14.67□□□□□ -0.06
SNX27-204ENST00000458013 ZNF22P17026 224 aaPredicted RBP14.67□□□□□ -0.06
SNX27-204ENST00000458013 SPANXCQ9NY87 97 aa14.67□□□□□ -0.06
SNX27-204ENST00000458013 TANC2Q9HCD6 1990 aa14.66□□□□□ -0.06
SNX27-204ENST00000458013 EP300Q09472 2414 aaPredicted RBP14.66□□□□□ -0.06
SNX27-204ENST00000458013 LMO4P61968 165 aa14.66□□□□□ -0.06
SNX27-204ENST00000458013 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP14.65□□□□□ -0.063e-9■■■■■ 34.8
SNX27-204ENST00000458013 LINC00643Q86TS7 51 aa14.65□□□□□ -0.06
SNX27-204ENST00000458013 ZNF295-AS1Q8N0V1 137 aa14.65□□□□□ -0.06
SNX27-204ENST00000458013 LINC00308Q8TCZ7 52 aa14.65□□□□□ -0.06
SNX27-204ENST00000458013 ZGRF1Q86YA3 2104 aa14.65□□□□□ -0.06
SNX27-204ENST00000458013 WFDC13Q8IUB5 93 aa14.65□□□□□ -0.07
SNX27-204ENST00000458013 IGLV9-49A0A0B4J1Y8 123 aa14.64□□□□□ -0.07
SNX27-204ENST00000458013 FAM30AQ9NZY2 134 aa14.64□□□□□ -0.07
SNX27-204ENST00000458013 SPANXB1Q9NS25 103 aaPredicted RBP14.64□□□□□ -0.07
SNX27-204ENST00000458013 POM121L12Q8N7R1 296 aa14.63□□□□□ -0.07
SNX27-204ENST00000458013 RETNQ9HD89 108 aa14.63□□□□□ -0.07
SNX27-204ENST00000458013 RNF185Q96GF1 192 aa14.63□□□□□ -0.07
SNX27-204ENST00000458013 FAM236DA0A1B0GTK5 79 aa14.63□□□□□ -0.07
SNX27-204ENST00000458013 FAM236CP0DP71 79 aa14.63□□□□□ -0.07
SNX27-204ENST00000458013 TMEM89A2RUT3 159 aa14.62□□□□□ -0.07
SNX27-204ENST00000458013 TNFRSF13BO14836 293 aaPredicted RBP14.62□□□□□ -0.07
SNX27-204ENST00000458013 HILS1P60008 231 aa14.62□□□□□ -0.07
SNX27-204ENST00000458013 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP14.62□□□□□ -0.07
SNX27-204ENST00000458013 MRPS12O15235 138 aaKnown RBP14.62□□□□□ -0.07
SNX27-204ENST00000458013 MBD6Q96DN6 1003 aa14.62□□□□□ -0.07
SNX27-204ENST00000458013 C6orf99Q4VX62 202 aa14.61□□□□□ -0.07
SNX27-204ENST00000458013 CLUHP3Q96NS8 147 aa14.61□□□□□ -0.07
SNX27-204ENST00000458013 IGF2-ASQ6U949 168 aa14.61□□□□□ -0.07
SNX27-204ENST00000458013 P0C879 139 aa14.6□□□□□ -0.07
SNX27-204ENST00000458013 KIAA1549Q9HCM3 1950 aa14.6□□□□□ -0.07
SNX27-204ENST00000458013 K7EQG2 157 aa14.6□□□□□ -0.07
SNX27-204ENST00000458013 Q6ZS46 218 aa14.6□□□□□ -0.07
SNX27-204ENST00000458013 TRBV6-8A0A0A6YYG3 113 aa14.6□□□□□ -0.07
SNX27-204ENST00000458013 MALRD1Q5VYJ5 2156 aa14.6□□□□□ -0.07
SNX27-204ENST00000458013 CCKP06307 115 aa14.59□□□□□ -0.07
SNX27-204ENST00000458013 EDN2P20800 178 aa14.59□□□□□ -0.07
SNX27-204ENST00000458013 M0QY20 66 aa14.59□□□□□ -0.07
SNX27-204ENST00000458013 GAS8-AS1O95177 125 aa14.59□□□□□ -0.07
SNX27-204ENST00000458013 INSL3P51460 131 aa14.59□□□□□ -0.07
SNX27-204ENST00000458013 PRR9Q5T870 116 aa14.59□□□□□ -0.07
SNX27-204ENST00000458013 SPRY4Q9C004 299 aa14.59□□□□□ -0.07
SNX27-204ENST00000458013 NCOR1O75376 2440 aa14.59□□□□□ -0.07
SNX27-204ENST00000458013 ZFAND3Q9H8U3 227 aa14.58□□□□□ -0.08
SNX27-204ENST00000458013 CNOT1A5YKK6 2376 aaKnown RBP14.58□□□□□ -0.08
SNX27-204ENST00000458013 CACNA1GO43497 2377 aa14.58□□□□□ -0.08
SNX27-204ENST00000458013 NCOA6Q14686 2063 aaPredicted RBP14.58□□□□□ -0.08
SNX27-204ENST00000458013 C14orf177Q52M58 125 aa14.58□□□□□ -0.08
SNX27-204ENST00000458013 PRORYQ9H606 182 aa14.58□□□□□ -0.08
SNX27-204ENST00000458013 RETNLBQ9BQ08 111 aa14.57□□□□□ -0.08
SNX27-204ENST00000458013 TRBV6-5A0A0K0K1A5 114 aa14.57□□□□□ -0.08
SNX27-204ENST00000458013 Q6ZSV7 163 aa14.57□□□□□ -0.08
SNX27-204ENST00000458013 CRIP3Q6Q6R5 217 aa14.57□□□□□ -0.08
SNX27-204ENST00000458013 GVINP1Q7Z2Y8 2422 aa14.56□□□□□ -0.08
SNX27-204ENST00000458013 LYRM9A8MSI8 78 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms