RNA–Protein interactions for RNA: ENST00000457526.1

ZNF440-204, Transcript of zinc finger protein 440, humanhuman

TSL 4

Gene ZNF440, Length 559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF440-204ENST00000457526 LINC01600Q96MT4 127 aa2.82□□□□□ -1.96
ZNF440-204ENST00000457526 V9GYH0 126 aa2.82□□□□□ -1.96
ZNF440-204ENST00000457526 LRRIQ1Q96JM4 1722 aa2.82□□□□□ -1.96
ZNF440-204ENST00000457526 KIAA0100Q14667 2235 aaKnown RBP2.81□□□□□ -1.96
ZNF440-204ENST00000457526 BRWD1Q9NSI6 2320 aa2.81□□□□□ -1.96
ZNF440-204ENST00000457526 ZNF815PA8K554 130 aa2.81□□□□□ -1.96
ZNF440-204ENST00000457526 EFNA4P52798 201 aa2.81□□□□□ -1.96
ZNF440-204ENST00000457526 KRTAP10-5P60370 271 aa2.81□□□□□ -1.96
ZNF440-204ENST00000457526 SPAG11BQ08648 103 aa2.81□□□□□ -1.96
ZNF440-204ENST00000457526 HMGN3Q15651 99 aa2.81□□□□□ -1.96
ZNF440-204ENST00000457526 SPAG11AQ6PDA7 123 aa2.81□□□□□ -1.96
ZNF440-204ENST00000457526 LINC00322Q6ZN03 302 aaPredicted RBP2.81□□□□□ -1.96
ZNF440-204ENST00000457526 LINC00643Q86TS7 51 aa2.81□□□□□ -1.96
ZNF440-204ENST00000457526 C18orf32Q8TCD1 76 aa2.81□□□□□ -1.96
ZNF440-204ENST00000457526 NCOA2Q15596 1464 aa2.81□□□□□ -1.96
ZNF440-204ENST00000457526 PSME4Q14997 1843 aa2.81□□□□□ -1.96
ZNF440-204ENST00000457526 UNC13CQ8NB66 2214 aa2.81□□□□□ -1.96
ZNF440-204ENST00000457526 PRRC2AP48634 2157 aaKnown RBP2.8□□□□□ -1.96
ZNF440-204ENST00000457526 PEAK1Q9H792 1746 aa2.8□□□□□ -1.96
ZNF440-204ENST00000457526 IGLV3-19P01714 112 aa2.8□□□□□ -1.96
ZNF440-204ENST00000457526 IL9P15248 144 aa2.8□□□□□ -1.96
ZNF440-204ENST00000457526 CFAP126Q5VTH2 177 aa2.8□□□□□ -1.96
ZNF440-204ENST00000457526 PPP1R1CQ8WVI7 109 aa2.8□□□□□ -1.96
ZNF440-204ENST00000457526 KRTAP4-4Q9BYR3 166 aa2.8□□□□□ -1.96
ZNF440-204ENST00000457526 CASP8AP2Q9UKL3 1982 aa2.8□□□□□ -1.96
ZNF440-204ENST00000457526 TANC1Q9C0D5 1861 aa2.79□□□□□ -1.96
ZNF440-204ENST00000457526 RGPD3A6NKT7 1758 aaPredicted RBP2.79□□□□□ -1.96
ZNF440-204ENST00000457526 COL16A1Q07092 1604 aaPredicted RBP2.79□□□□□ -1.96
ZNF440-204ENST00000457526 MAP3K4Q9Y6R4 1608 aa2.79□□□□□ -1.96
ZNF440-204ENST00000457526 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP2.79□□□□□ -1.96
ZNF440-204ENST00000457526 INE1O15225 51 aa2.79□□□□□ -1.96
ZNF440-204ENST00000457526 PSMG4Q5JS54 123 aa2.79□□□□□ -1.96
ZNF440-204ENST00000457526 HEPN1Q6WQI6 88 aa2.79□□□□□ -1.96
ZNF440-204ENST00000457526 DEFB132Q7Z7B7 95 aa2.79□□□□□ -1.96
ZNF440-204ENST00000457526 Q86TA4 180 aa2.79□□□□□ -1.96
ZNF440-204ENST00000457526 TMEM14BQ9NUH8 114 aa2.79□□□□□ -1.96
ZNF440-204ENST00000457526 MPDZO75970 2070 aa2.79□□□□□ -1.96
ZNF440-204ENST00000457526 ZNF142P52746 1687 aaPredicted RBP2.79□□□□□ -1.96
ZNF440-204ENST00000457526 CLTCQ00610 1675 aaKnown RBP2.79□□□□□ -1.96
ZNF440-204ENST00000457526 TOP2BQ02880 1626 aa2.79□□□□□ -1.96
ZNF440-204ENST00000457526 ZGRF1Q86YA3 2104 aa2.78□□□□□ -1.96
ZNF440-204ENST00000457526 IQSEC2Q5JU85 1478 aa2.78□□□□□ -1.96
ZNF440-204ENST00000457526 NRXN1Q9ULB1 1477 aa2.78□□□□□ -1.96
ZNF440-204ENST00000457526 PTPRDP23468 1912 aa2.78□□□□□ -1.96
ZNF440-204ENST00000457526 IGKV3D-7A0A0C4DH55 119 aa2.78□□□□□ -1.96
ZNF440-204ENST00000457526 IGKV3OR2-268A0A0C4DH90 116 aa2.78□□□□□ -1.96
ZNF440-204ENST00000457526 R4GMQ9 66 aa2.78□□□□□ -1.96
ZNF440-204ENST00000457526 ARL2-SNX15V9GYD0 113 aa2.78□□□□□ -1.96
ZNF440-204ENST00000457526 SPAG17Q6Q759 2223 aa2.78□□□□□ -1.96
ZNF440-204ENST00000457526 CDK13Q14004 1512 aaKnown RBP2.78□□□□□ -1.97
ZNF440-204ENST00000457526 UGGT2Q9NYU1 1516 aa2.78□□□□□ -1.97
ZNF440-204ENST00000457526 KIF20BQ96Q89 1820 aa2.77□□□□□ -1.97
ZNF440-204ENST00000457526 IGKV2-29A2NJV5 120 aaPredicted RBP2.77□□□□□ -1.97
ZNF440-204ENST00000457526 M0R2N4 97 aa2.77□□□□□ -1.97
ZNF440-204ENST00000457526 HMGN2P05204 90 aaKnown RBP2.77□□□□□ -1.97
ZNF440-204ENST00000457526 SAA2P0DJI9 122 aaPredicted RBP2.77□□□□□ -1.97
ZNF440-204ENST00000457526 FXYD4P59646 89 aa2.77□□□□□ -1.97
ZNF440-204ENST00000457526 FXYD3Q14802 87 aa2.77□□□□□ -1.97
ZNF440-204ENST00000457526 XAF1Q6GPH4 301 aa2.77□□□□□ -1.97
ZNF440-204ENST00000457526 NOTCH3Q9UM47 2321 aa2.77□□□□□ -1.97
ZNF440-204ENST00000457526 CEP192Q8TEP8 1941 aa2.77□□□□□ -1.97
ZNF440-204ENST00000457526 CTTNBP2Q8WZ74 1663 aa2.76□□□□□ -1.97
ZNF440-204ENST00000457526 IGKV2-40A0A087WW87 121 aaPredicted RBP2.76□□□□□ -1.97
ZNF440-204ENST00000457526 NBDYA0A0U1RRE5 68 aa2.76□□□□□ -1.97
ZNF440-204ENST00000457526 F8WEM9 126 aa2.76□□□□□ -1.97
ZNF440-204ENST00000457526 IGKV1-17P01599 117 aa2.76□□□□□ -1.97
ZNF440-204ENST00000457526 IGKV2D-40P01614 121 aaPredicted RBP2.76□□□□□ -1.97
ZNF440-204ENST00000457526 Q6ZRN7 208 aaPredicted RBP2.76□□□□□ -1.97
ZNF440-204ENST00000457526 SNURFQ9Y675 71 aa2.76□□□□□ -1.97
ZNF440-204ENST00000457526 V9GYV3 84 aa2.76□□□□□ -1.97
ZNF440-204ENST00000457526 ABCC1P33527 1531 aa2.76□□□□□ -1.97
ZNF440-204ENST00000457526 BLMP54132 1417 aaPredicted RBP2.76□□□□□ -1.97
ZNF440-204ENST00000457526 TCHHQ07283 1943 aa2.76□□□□□ -1.97
ZNF440-204ENST00000457526 BAZ2BQ9UIF8 2168 aaKnown RBP2.76□□□□□ -1.97
ZNF440-204ENST00000457526 MYO3AQ8NEV4 1616 aa2.75□□□□□ -1.97
ZNF440-204ENST00000457526 RTTNQ86VV8 2226 aa2.75□□□□□ -1.97
ZNF440-204ENST00000457526 SHROOM3Q8TF72 1996 aa2.75□□□□□ -1.97
ZNF440-204ENST00000457526 SMIM13P0DJ93 91 aa2.75□□□□□ -1.97
ZNF440-204ENST00000457526 KRTAP10-12P60413 245 aa2.75□□□□□ -1.97
ZNF440-204ENST00000457526 ZC3H13Q5T200 1668 aaKnown RBP2.75□□□□□ -1.97
ZNF440-204ENST00000457526 LRRC37A3O60309 1634 aa2.75□□□□□ -1.97
ZNF440-204ENST00000457526 ARFGEF3Q5TH69 2177 aa2.74□□□□□ -1.97
ZNF440-204ENST00000457526 KCPQ6ZWJ8 1503 aa2.74□□□□□ -1.97
ZNF440-204ENST00000457526 NRXN2Q9P2S2 1712 aa2.74□□□□□ -1.97
ZNF440-204ENST00000457526 COL4A6Q14031 1691 aa2.74□□□□□ -1.97
ZNF440-204ENST00000457526 MRC1P22897 1456 aa2.74□□□□□ -1.97
ZNF440-204ENST00000457526 LOC110117498A0A087WWA1 95 aa2.74□□□□□ -1.97
ZNF440-204ENST00000457526 C10orf142B7Z368 130 aa2.74□□□□□ -1.97
ZNF440-204ENST00000457526 F8VRH5 84 aa2.74□□□□□ -1.97
ZNF440-204ENST00000457526 C5orf56Q8N8D9 126 aa2.74□□□□□ -1.97
ZNF440-204ENST00000457526 ZNF625Q96I27 306 aaPredicted RBP2.74□□□□□ -1.97
ZNF440-204ENST00000457526 AMELXQ99217 191 aa2.74□□□□□ -1.97
ZNF440-204ENST00000457526 SIP14410 1827 aa2.74□□□□□ -1.97
ZNF440-204ENST00000457526 LTBP2Q14767 1821 aa2.74□□□□□ -1.97
ZNF440-204ENST00000457526 CFAP74Q9C0B2 1584 aa2.74□□□□□ -1.97
ZNF440-204ENST00000457526 DIP2CQ9Y2E4 1556 aa2.74□□□□□ -1.97
ZNF440-204ENST00000457526 MAGI3Q5TCQ9 1506 aa2.73□□□□□ -1.97
ZNF440-204ENST00000457526 EHBP1L1Q8N3D4 1523 aa2.73□□□□□ -1.97
ZNF440-204ENST00000457526 ALPK2Q86TB3 2170 aa2.73□□□□□ -1.97
ZNF440-204ENST00000457526 FAM223BA6NKX1 122 aa2.73□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms