RNA–Protein interactions for RNA: ENST00000456948.5

CBX3-204, Transcript of chromobox 3, humanhuman

TSL 5

Gene CBX3, Length 1,068 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-204ENST00000456948 A0A1B0GUV1 79 aa15.38■□□□□ 0.05
CBX3-204ENST00000456948 SDHAF1A6NFY7 115 aa15.38■□□□□ 0.05
CBX3-204ENST00000456948 S100A8P05109 93 aa15.38■□□□□ 0.05
CBX3-204ENST00000456948 PMCHP20382 165 aa15.38■□□□□ 0.05
CBX3-204ENST00000456948 ENHOQ6UWT2 76 aa15.38■□□□□ 0.05
CBX3-204ENST00000456948 RPL39LQ96EH5 51 aaKnown RBP15.38■□□□□ 0.05
CBX3-204ENST00000456948 ST20Q9HBF5 79 aa15.38■□□□□ 0.05
CBX3-204ENST00000456948 TRBV6-5A0A0K0K1A5 114 aa15.37■□□□□ 0.05
CBX3-204ENST00000456948 I3L3M4 83 aa15.37■□□□□ 0.05
CBX3-204ENST00000456948 PPP1R2P9O14990 202 aa15.37■□□□□ 0.05
CBX3-204ENST00000456948 PNRC1Q12796 327 aaPredicted RBP15.37■□□□□ 0.05
CBX3-204ENST00000456948 C14orf177Q52M58 125 aa15.37■□□□□ 0.05
CBX3-204ENST00000456948 CLLU1Q5K131 121 aa15.37■□□□□ 0.05
CBX3-204ENST00000456948 LINC00269Q8N2A0 174 aa15.37■□□□□ 0.05
CBX3-204ENST00000456948 BAALCQ8WXS3 180 aa15.37■□□□□ 0.05
CBX3-204ENST00000456948 LRP1BQ9NZR2 4599 aa15.37■□□□□ 0.05
CBX3-204ENST00000456948 APCSP02743 223 aa15.36■□□□□ 0.05
CBX3-204ENST00000456948 RAB4AP20338 218 aa15.36■□□□□ 0.05
CBX3-204ENST00000456948 FUSP35637 526 aaKnown RBP eCLIP15.36■□□□□ 0.05
CBX3-204ENST00000456948 RYR1P21817 5038 aa15.35■□□□□ 0.05
CBX3-204ENST00000456948 AMMECR1LQ6DCA0 310 aa15.35■□□□□ 0.05
CBX3-204ENST00000456948 AMN1Q8IY45 258 aa15.35■□□□□ 0.05
CBX3-204ENST00000456948 PRR34Q9NV39 138 aa15.35■□□□□ 0.05
CBX3-204ENST00000456948 H7C423 109 aa15.34■□□□□ 0.05
CBX3-204ENST00000456948 LECT2O14960 151 aa15.34■□□□□ 0.05
CBX3-204ENST00000456948 TRAV8-4A0A0B4J246 113 aa15.33■□□□□ 0.04
CBX3-204ENST00000456948 CAMPP49913 170 aa15.33■□□□□ 0.04
CBX3-204ENST00000456948 REG3AQ06141 175 aa15.33■□□□□ 0.04
CBX3-204ENST00000456948 MAPKAPK5-AS1Q8N8E1 139 aa15.33■□□□□ 0.04
CBX3-204ENST00000456948 DEFB104AQ8WTQ1 72 aa15.33■□□□□ 0.04
CBX3-204ENST00000456948 F8W036 122 aa15.32■□□□□ 0.04
CBX3-204ENST00000456948 RNF185Q96GF1 192 aa15.32■□□□□ 0.04
CBX3-204ENST00000456948 MT-ND4LP03901 98 aa15.31■□□□□ 0.04
CBX3-204ENST00000456948 CLPSL2Q6UWE3 100 aa15.31■□□□□ 0.04
CBX3-204ENST00000456948 DNAH5Q8TE73 4624 aa15.31■□□□□ 0.04
CBX3-204ENST00000456948 VCYO14598 125 aa15.3■□□□□ 0.04
CBX3-204ENST00000456948 FAM104BQ5XKR9 115 aa15.3■□□□□ 0.04
CBX3-204ENST00000456948 C20orf203Q8NBC4 194 aa15.3■□□□□ 0.04
CBX3-204ENST00000456948 ANAPC16Q96DE5 110 aa15.3■□□□□ 0.04
CBX3-204ENST00000456948 TMEM70Q9BUB7 260 aa15.3■□□□□ 0.04
CBX3-204ENST00000456948 HSPG2P98160 4391 aa15.29■□□□□ 0.04
CBX3-204ENST00000456948 IGLV2-33A0A075B6J2 118 aaPredicted RBP15.29■□□□□ 0.04
CBX3-204ENST00000456948 LINC00862A6NCI5 91 aa15.29■□□□□ 0.04
CBX3-204ENST00000456948 HLA-DQA1P01909 254 aa15.29■□□□□ 0.04
CBX3-204ENST00000456948 KRTAP10-1P60331 282 aa15.29■□□□□ 0.04
CBX3-204ENST00000456948 HBBP68871 147 aa15.29■□□□□ 0.04
CBX3-204ENST00000456948 RNASEKQ6P5S7 137 aaKnown RBP15.29■□□□□ 0.04
CBX3-204ENST00000456948 BTF3L4Q96K17 158 aa15.29■□□□□ 0.04
CBX3-204ENST00000456948 KRTAP4-5Q9BYR2 181 aa15.29■□□□□ 0.04
CBX3-204ENST00000456948 WFDC2Q14508 124 aa15.28■□□□□ 0.04
CBX3-204ENST00000456948 UQCC3Q6UW78 93 aa15.28■□□□□ 0.04
CBX3-204ENST00000456948 IGLV4-60A0A075B6I1 120 aa15.27■□□□□ 0.04
CBX3-204ENST00000456948 TRBV27A0A0K0K1C4 114 aa15.27■□□□□ 0.04
CBX3-204ENST00000456948 ZNF25P17030 456 aaPredicted RBP15.27■□□□□ 0.04
CBX3-204ENST00000456948 SMAGPQ0VAQ4 97 aa15.27■□□□□ 0.04
CBX3-204ENST00000456948 MRPL54Q6P161 138 aaKnown RBP15.27■□□□□ 0.04
CBX3-204ENST00000456948 TMEM101Q96IK0 257 aa15.27■□□□□ 0.04
CBX3-204ENST00000456948 FCER1GP30273 86 aa15.26■□□□□ 0.03
CBX3-204ENST00000456948 CKS2P33552 79 aa15.26■□□□□ 0.03
CBX3-204ENST00000456948 POLR2KP53803 58 aaKnown RBP15.26■□□□□ 0.03
CBX3-204ENST00000456948 ATP5L2Q7Z4Y8 100 aa15.26■□□□□ 0.03
CBX3-204ENST00000456948 KIR2DL4Q99706 377 aa15.26■□□□□ 0.03
CBX3-204ENST00000456948 RPS10P46783 165 aaKnown RBP15.25■□□□□ 0.03
CBX3-204ENST00000456948 SUMO2P61956 95 aaKnown RBP15.25■□□□□ 0.03
CBX3-204ENST00000456948 MRPL51Q4U2R6 128 aaKnown RBP15.25■□□□□ 0.03
CBX3-204ENST00000456948 IGKV2D-29A0A075B6S2 120 aaPredicted RBP15.24■□□□□ 0.03
CBX3-204ENST00000456948 IGKV2-29A2NJV5 120 aaPredicted RBP15.24■□□□□ 0.03
CBX3-204ENST00000456948 SMKR1H3BMG3 65 aa15.24■□□□□ 0.03
CBX3-204ENST00000456948 GAS8-AS1O95177 125 aa15.24■□□□□ 0.03
CBX3-204ENST00000456948 FGF6P10767 208 aa15.24■□□□□ 0.03
CBX3-204ENST00000456948 C20orf78Q9BR46 151 aa15.24■□□□□ 0.03
CBX3-204ENST00000456948 TMEM242Q9NWH2 141 aa15.24■□□□□ 0.03
CBX3-204ENST00000456948 IGLV10-54A0A075B6I4 117 aa15.23■□□□□ 0.03
CBX3-204ENST00000456948 TCAPO15273 167 aa15.23■□□□□ 0.03
CBX3-204ENST00000456948 PPBPP02775 128 aa15.23■□□□□ 0.03
CBX3-204ENST00000456948 Q8N1X5 172 aa15.23■□□□□ 0.03
CBX3-204ENST00000456948 USP17L23D6RBM5 183 aa15.22■□□□□ 0.03
CBX3-204ENST00000456948 TSHBP01222 138 aa15.22■□□□□ 0.03
CBX3-204ENST00000456948 CLRN3Q8NCR9 226 aa15.22■□□□□ 0.03
CBX3-204ENST00000456948 C7orf77A4D0Y5 90 aa15.21■□□□□ 0.03
CBX3-204ENST00000456948 ESDP10768 282 aa15.21■□□□□ 0.03
CBX3-204ENST00000456948 IFITM2Q01629 132 aa15.21■□□□□ 0.03
CBX3-204ENST00000456948 NRACQ8N912 160 aa15.21■□□□□ 0.03
CBX3-204ENST00000456948 OR5A1Q8NGJ0 315 aa15.21■□□□□ 0.03
CBX3-204ENST00000456948 IGKV3OR2-268A0A0C4DH90 116 aa15.2■□□□□ 0.02
CBX3-204ENST00000456948 A0A1B0GXF2 115 aa15.2■□□□□ 0.02
CBX3-204ENST00000456948 DGAT2L7PQ6IED9 249 aa15.2■□□□□ 0.02
CBX3-204ENST00000456948 TMEM18Q96B42 140 aa15.2■□□□□ 0.02
CBX3-204ENST00000456948 APOBP04114 4563 aaKnown RBP15.19■□□□□ 0.02
CBX3-204ENST00000456948 TRBV24-1A0A075B6N3 115 aa15.19■□□□□ 0.02
CBX3-204ENST00000456948 TMEM218A2RU14 115 aa15.18■□□□□ 0.02
CBX3-204ENST00000456948 PHOX2AO14813 284 aa15.18■□□□□ 0.02
CBX3-204ENST00000456948 XGP55808 180 aa15.18■□□□□ 0.02
CBX3-204ENST00000456948 CFAP161Q6P656 301 aa15.18■□□□□ 0.02
CBX3-204ENST00000456948 ABCA13Q86UQ4 5058 aa15.18■□□□□ 0.02
CBX3-204ENST00000456948 TNFRSF6BO95407 300 aa15.17■□□□□ 0.02
CBX3-204ENST00000456948 RPL32P62910 135 aaKnown RBP15.17■□□□□ 0.02
CBX3-204ENST00000456948 KRTAP26-1Q6PEX3 210 aa15.17■□□□□ 0.02
CBX3-204ENST00000456948 D6R8Y8 96 aa15.16■□□□□ 0.02
CBX3-204ENST00000456948 MRPL52Q86TS9 123 aaKnown RBP15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 94.2 ms