RNA–Protein interactions for RNA: ENST00000456222.1

SEC22C-213, Transcript of SEC22 homolog C, vesicle trafficking protein, humanhuman

TSL 4

Gene SEC22C, Length 558 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22C-213ENST00000456222 HNRNPA3P51991 378 aaKnown RBP13.96□□□□□ -0.17
SEC22C-213ENST00000456222 SDIM1Q6ZPB5 146 aa13.96□□□□□ -0.17
SEC22C-213ENST00000456222 PGLYRP4Q96LB8 373 aa13.96□□□□□ -0.17
SEC22C-213ENST00000456222 TRAV26-2A0A0B4J265 109 aa13.95□□□□□ -0.18
SEC22C-213ENST00000456222 A0A1B0GUV1 79 aa13.95□□□□□ -0.18
SEC22C-213ENST00000456222 GATD1Q8NB37 220 aa13.95□□□□□ -0.18
SEC22C-213ENST00000456222 OCC1Q8TAD7 63 aa13.95□□□□□ -0.18
SEC22C-213ENST00000456222 CNFNQ9BYD5 112 aa13.95□□□□□ -0.18
SEC22C-213ENST00000456222 SLPIP03973 132 aa13.94□□□□□ -0.18
SEC22C-213ENST00000456222 FOXA3P55318 350 aaPredicted RBP13.94□□□□□ -0.18
SEC22C-213ENST00000456222 TWIST1Q15672 202 aa13.94□□□□□ -0.18
SEC22C-213ENST00000456222 WDR73Q6P4I2 378 aa13.94□□□□□ -0.18
SEC22C-213ENST00000456222 RPP21Q9H633 154 aaKnown RBP13.94□□□□□ -0.18
SEC22C-213ENST00000456222 BIN3Q9NQY0 253 aa13.94□□□□□ -0.18
SEC22C-213ENST00000456222 RPL37AP61513 92 aaKnown RBP13.93□□□□□ -0.18
SEC22C-213ENST00000456222 GTSF1Q8WW33 167 aa13.93□□□□□ -0.18
SEC22C-213ENST00000456222 AMTP48728 403 aa13.92□□□□□ -0.18
SEC22C-213ENST00000456222 RPL39LQ96EH5 51 aaKnown RBP13.92□□□□□ -0.18
SEC22C-213ENST00000456222 TRAV8-4A0A0B4J246 113 aa13.91□□□□□ -0.18
SEC22C-213ENST00000456222 hDV102S1A0JD36 115 aa13.91□□□□□ -0.18
SEC22C-213ENST00000456222 CNBPP62633 177 aaKnown RBP13.91□□□□□ -0.18
SEC22C-213ENST00000456222 COTL1Q14019 142 aa13.91□□□□□ -0.18
SEC22C-213ENST00000456222 CLRN3Q8NCR9 226 aa13.91□□□□□ -0.18
SEC22C-213ENST00000456222 Q6ZNX1 250 aa13.89□□□□□ -0.19
SEC22C-213ENST00000456222 UBE2L6O14933 153 aa13.88□□□□□ -0.19
SEC22C-213ENST00000456222 TAGLN2P37802 199 aaKnown RBP13.88□□□□□ -0.19
SEC22C-213ENST00000456222 OXTP01178 125 aa13.87□□□□□ -0.19
SEC22C-213ENST00000456222 CHTF8P0CG12 524 aa13.87□□□□□ -0.19
SEC22C-213ENST00000456222 CIRBPQ14011 172 aaKnown RBP13.87□□□□□ -0.19
SEC22C-213ENST00000456222 ALKAL2Q6UX46 152 aa13.87□□□□□ -0.19
SEC22C-213ENST00000456222 C15orf56Q8N910 161 aa13.87□□□□□ -0.19
SEC22C-213ENST00000456222 IGKV3OR2-268A0A0C4DH90 116 aa13.86□□□□□ -0.19
SEC22C-213ENST00000456222 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.85□□□□□ -0.19
SEC22C-213ENST00000456222 IGKV2-29A2NJV5 120 aaPredicted RBP13.85□□□□□ -0.19
SEC22C-213ENST00000456222 GAGE12HA6NDE8 117 aa13.85□□□□□ -0.19
SEC22C-213ENST00000456222 GAS8-AS1O95177 125 aa13.84□□□□□ -0.19
SEC22C-213ENST00000456222 GATCO43716 136 aaKnown RBP13.83□□□□□ -0.2
SEC22C-213ENST00000456222 IGHV3-64A0A075B6Q5 118 aa13.82□□□□□ -0.2
SEC22C-213ENST00000456222 TMEM250H0YL14 139 aa13.82□□□□□ -0.2
SEC22C-213ENST00000456222 LYPD6BQ8NI32 183 aa13.82□□□□□ -0.2
SEC22C-213ENST00000456222 AP5S1Q9NUS5 200 aa13.82□□□□□ -0.2
SEC22C-213ENST00000456222 hCG_2014768A0A024R1R8 64 aa13.81□□□□□ -0.2
SEC22C-213ENST00000456222 SDHAF1A6NFY7 115 aa13.81□□□□□ -0.2
SEC22C-213ENST00000456222 CEBPGP53567 150 aa13.81□□□□□ -0.2
SEC22C-213ENST00000456222 HIGD2BQ4VC39 106 aa13.81□□□□□ -0.2
SEC22C-213ENST00000456222 FAM231DQ6ZW35 169 aa13.81□□□□□ -0.2
SEC22C-213ENST00000456222 UBR4Q5T4S7 5183 aa13.8□□□□□ -0.2
SEC22C-213ENST00000456222 A0A087WYN8 130 aa13.8□□□□□ -0.2
SEC22C-213ENST00000456222 FAM231BA6NCW3 169 aa13.8□□□□□ -0.2
SEC22C-213ENST00000456222 AKAP14Q86UN6 197 aa13.8□□□□□ -0.2
SEC22C-213ENST00000456222 SPACA4Q8TDM5 124 aa13.8□□□□□ -0.2
SEC22C-213ENST00000456222 CHCHD10Q8WYQ3 142 aaPredicted RBP13.8□□□□□ -0.2
SEC22C-213ENST00000456222 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.79□□□□□ -0.2
SEC22C-213ENST00000456222 NCR2O95944 276 aa13.79□□□□□ -0.2
SEC22C-213ENST00000456222 APCSP02743 223 aa13.79□□□□□ -0.2
SEC22C-213ENST00000456222 FGF6P10767 208 aa13.79□□□□□ -0.2
SEC22C-213ENST00000456222 BLOC1S1P78537 153 aa13.79□□□□□ -0.2
SEC22C-213ENST00000456222 AMMECR1LQ6DCA0 310 aa13.79□□□□□ -0.2
SEC22C-213ENST00000456222 RNASEKQ6P5S7 137 aaKnown RBP13.79□□□□□ -0.2
SEC22C-213ENST00000456222 SMIM15Q7Z3B0 74 aa13.79□□□□□ -0.2
SEC22C-213ENST00000456222 A8MWL6 223 aa13.78□□□□□ -0.2
SEC22C-213ENST00000456222 SERTAD4-AS1Q5TG53 156 aa13.77□□□□□ -0.21
SEC22C-213ENST00000456222 TRBV6-5A0A0K0K1A5 114 aa13.76□□□□□ -0.21
SEC22C-213ENST00000456222 TSHBP01222 138 aa13.76□□□□□ -0.21
SEC22C-213ENST00000456222 COX6A2Q02221 97 aa13.76□□□□□ -0.21
SEC22C-213ENST00000456222 DPH3Q96FX2 82 aa13.76□□□□□ -0.21
SEC22C-213ENST00000456222 MT1HL1P0DM35 61 aa13.75□□□□□ -0.21
SEC22C-213ENST00000456222 RPS10P46783 165 aaKnown RBP13.75□□□□□ -0.21
SEC22C-213ENST00000456222 FOXI1Q12951 378 aa13.75□□□□□ -0.21
SEC22C-213ENST00000456222 CT83Q5H943 113 aa13.75□□□□□ -0.21
SEC22C-213ENST00000456222 TEX261Q6UWH6 196 aa13.75□□□□□ -0.21
SEC22C-213ENST00000456222 LINC01551Q86U37 167 aa13.75□□□□□ -0.21
SEC22C-213ENST00000456222 PRSS3P2Q8NHM4 247 aa13.75□□□□□ -0.21
SEC22C-213ENST00000456222 RNF185Q96GF1 192 aa13.75□□□□□ -0.21
SEC22C-213ENST00000456222 TMEM242Q9NWH2 141 aa13.75□□□□□ -0.21
SEC22C-213ENST00000456222 H7C423 109 aa13.74□□□□□ -0.21
SEC22C-213ENST00000456222 I3L3M4 83 aa13.74□□□□□ -0.21
SEC22C-213ENST00000456222 ESDP10768 282 aa13.74□□□□□ -0.21
SEC22C-213ENST00000456222 PMCHP20382 165 aa13.74□□□□□ -0.21
SEC22C-213ENST00000456222 CFAP161Q6P656 301 aa13.74□□□□□ -0.21
SEC22C-213ENST00000456222 SMIM7Q9BQ49 75 aa13.74□□□□□ -0.21
SEC22C-213ENST00000456222 PLAC8Q9NZF1 115 aa13.74□□□□□ -0.21
SEC22C-213ENST00000456222 GVQW2A0A096LPI5 108 aaPredicted RBP13.73□□□□□ -0.21
SEC22C-213ENST00000456222 HIGD1CA8MV81 97 aa13.73□□□□□ -0.21
SEC22C-213ENST00000456222 TNXBP22105 4242 aa13.73□□□□□ -0.21
SEC22C-213ENST00000456222 XCL1P47992 114 aa13.72□□□□□ -0.21
SEC22C-213ENST00000456222 OR5A1Q8NGJ0 315 aa13.72□□□□□ -0.21
SEC22C-213ENST00000456222 TSKUQ8WUA8 353 aa13.72□□□□□ -0.21
SEC22C-213ENST00000456222 LINC00526Q96FQ7 95 aa13.72□□□□□ -0.21
SEC22C-213ENST00000456222 EIF5A2Q9GZV4 153 aaKnown RBP13.72□□□□□ -0.21
SEC22C-213ENST00000456222 IGKV2-24A0A0C4DH68 120 aa13.71□□□□□ -0.21
SEC22C-213ENST00000456222 A0A1B0GUT8 65 aa13.71□□□□□ -0.21
SEC22C-213ENST00000456222 PHOX2AO14813 284 aa13.71□□□□□ -0.21
SEC22C-213ENST00000456222 ZNF25P17030 456 aaPredicted RBP13.71□□□□□ -0.21
SEC22C-213ENST00000456222 TMEM191AQ9H0A3 160 aa13.71□□□□□ -0.21
SEC22C-213ENST00000456222 ST20Q9HBF5 79 aa13.71□□□□□ -0.21
SEC22C-213ENST00000456222 LINC00959A0A1B0GUT2 108 aa13.7□□□□□ -0.22
SEC22C-213ENST00000456222 SRP19P09132 144 aaKnown RBP13.7□□□□□ -0.22
SEC22C-213ENST00000456222 RAB4AP20338 218 aa13.7□□□□□ -0.22
SEC22C-213ENST00000456222 POLR2KP53803 58 aaKnown RBP13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms