RNA–Protein interactions for RNA: ENST00000455629.5

CCDC144B-204, Transcript of coiled-coil domain containing 144B (pseudogene), humanhuman

TSL 1 (best)

Gene CCDC144B, Length 946 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144B-204ENST00000455629 SUMO4Q6EEV6 95 aa11.72□□□□□ -0.53
CCDC144B-204ENST00000455629 GATD1Q8NB37 220 aa11.72□□□□□ -0.53
CCDC144B-204ENST00000455629 ATP6V0E2Q8NHE4 81 aa11.72□□□□□ -0.53
CCDC144B-204ENST00000455629 AMN1Q8IY45 258 aa11.71□□□□□ -0.53
CCDC144B-204ENST00000455629 RNF185Q96GF1 192 aa11.71□□□□□ -0.53
CCDC144B-204ENST00000455629 Q9UF83 564 aa11.71□□□□□ -0.53
CCDC144B-204ENST00000455629 M0QY20 66 aa11.7□□□□□ -0.54
CCDC144B-204ENST00000455629 RAB4AP20338 218 aa11.7□□□□□ -0.54
CCDC144B-204ENST00000455629 FAM30AQ9NZY2 134 aa11.7□□□□□ -0.54
CCDC144B-204ENST00000455629 TRBV10-1A0A0K0K1A3 114 aa11.69□□□□□ -0.54
CCDC144B-204ENST00000455629 FAM104BQ5XKR9 115 aa11.69□□□□□ -0.54
CCDC144B-204ENST00000455629 RASL11AQ6T310 242 aa11.69□□□□□ -0.54
CCDC144B-204ENST00000455629 TRAV8-3A0A0A6YYJ7 113 aa11.68□□□□□ -0.54
CCDC144B-204ENST00000455629 TRAV26-2A0A0B4J265 109 aa11.68□□□□□ -0.54
CCDC144B-204ENST00000455629 GAGE12JA6NER3 117 aa11.68□□□□□ -0.54
CCDC144B-204ENST00000455629 H7C1H1 209 aa11.68□□□□□ -0.54
CCDC144B-204ENST00000455629 J3QL48 77 aa11.68□□□□□ -0.54
CCDC144B-204ENST00000455629 ATP6V1G1O75348 118 aa11.68□□□□□ -0.54
CCDC144B-204ENST00000455629 PLA2G1BP04054 148 aaKnown RBP11.68□□□□□ -0.54
CCDC144B-204ENST00000455629 GAGE1Q13065 139 aa11.68□□□□□ -0.54
CCDC144B-204ENST00000455629 GAGE4Q13068 117 aa11.68□□□□□ -0.54
CCDC144B-204ENST00000455629 GAGE5Q13069 117 aa11.68□□□□□ -0.54
CCDC144B-204ENST00000455629 ELOBQ15370 118 aa11.68□□□□□ -0.54
CCDC144B-204ENST00000455629 GAGE13Q4V321 117 aa11.68□□□□□ -0.54
CCDC144B-204ENST00000455629 LINC00694P0DN24 101 aa11.67□□□□□ -0.54
CCDC144B-204ENST00000455629 Q6ZSA8 131 aa11.67□□□□□ -0.54
CCDC144B-204ENST00000455629 CBLN2Q8IUK8 224 aa11.67□□□□□ -0.54
CCDC144B-204ENST00000455629 NEXN-AS1Q8NBZ9 246 aa11.67□□□□□ -0.54
CCDC144B-204ENST00000455629 SMCO4Q9NRQ5 59 aa11.67□□□□□ -0.54
CCDC144B-204ENST00000455629 TGIF2-C20orf24A0A0A6YYL0 155 aa11.66□□□□□ -0.54
CCDC144B-204ENST00000455629 MRPL51Q4U2R6 128 aaKnown RBP11.66□□□□□ -0.54
CCDC144B-204ENST00000455629 TMEM136Q6ZRR5 245 aa11.66□□□□□ -0.54
CCDC144B-204ENST00000455629 MRAP2Q96G30 205 aa11.66□□□□□ -0.54
CCDC144B-204ENST00000455629 YPEL4Q96NS1 127 aa11.66□□□□□ -0.54
CCDC144B-204ENST00000455629 TRBV7-3A0A075B6L6 115 aa11.65□□□□□ -0.54
CCDC144B-204ENST00000455629 TRBV24-1A0A075B6N3 115 aa11.65□□□□□ -0.54
CCDC144B-204ENST00000455629 GAS8-AS1O95177 125 aa11.65□□□□□ -0.54
CCDC144B-204ENST00000455629 S100A1P23297 94 aa11.65□□□□□ -0.54
CCDC144B-204ENST00000455629 RPL36AP83881 106 aaKnown RBP11.65□□□□□ -0.54
CCDC144B-204ENST00000455629 WFDC2Q14508 124 aa11.65□□□□□ -0.54
CCDC144B-204ENST00000455629 RPL36ALQ969Q0 106 aaKnown RBP11.65□□□□□ -0.54
CCDC144B-204ENST00000455629 COX11Q9Y6N1 276 aa11.65□□□□□ -0.54
CCDC144B-204ENST00000455629 UBE2D3P61077 147 aa11.64□□□□□ -0.55
CCDC144B-204ENST00000455629 UBE2D2P62837 147 aa11.64□□□□□ -0.55
CCDC144B-204ENST00000455629 Q8N3U1 123 aa11.64□□□□□ -0.55
CCDC144B-204ENST00000455629 RPL39LQ96EH5 51 aaKnown RBP11.64□□□□□ -0.55
CCDC144B-204ENST00000455629 DNAJC30Q96LL9 226 aa11.64□□□□□ -0.55
CCDC144B-204ENST00000455629 NIT2Q9NQR4 276 aa11.64□□□□□ -0.55
CCDC144B-204ENST00000455629 DNAH8Q96JB1 4490 aa11.64□□□□□ -0.55
CCDC144B-204ENST00000455629 SMKR1H3BMG3 65 aa11.63□□□□□ -0.55
CCDC144B-204ENST00000455629 NCR2O95944 276 aa11.63□□□□□ -0.55
CCDC144B-204ENST00000455629 COX19Q49B96 90 aa11.63□□□□□ -0.55
CCDC144B-204ENST00000455629 LINC00528Q8N1L1 170 aa11.63□□□□□ -0.55
CCDC144B-204ENST00000455629 GNB1LQ9BYB4 327 aa11.63□□□□□ -0.55
CCDC144B-204ENST00000455629 HLA-DQA1P01909 254 aa11.62□□□□□ -0.55
CCDC144B-204ENST00000455629 RPS10P46783 165 aaKnown RBP11.62□□□□□ -0.55
CCDC144B-204ENST00000455629 DAZ4Q86SG3 579 aaKnown RBP11.62□□□□□ -0.55
CCDC144B-204ENST00000455629 DEFB104AQ8WTQ1 72 aa11.62□□□□□ -0.55
CCDC144B-204ENST00000455629 DAZ3Q9NR90 486 aaKnown RBP11.62□□□□□ -0.55
CCDC144B-204ENST00000455629 KRTAP29-1A8MX34 341 aaPredicted RBP11.61□□□□□ -0.55
CCDC144B-204ENST00000455629 LECT2O14960 151 aa11.61□□□□□ -0.55
CCDC144B-204ENST00000455629 SCO1O75880 301 aa11.61□□□□□ -0.55
CCDC144B-204ENST00000455629 CKS2P33552 79 aa11.61□□□□□ -0.55
CCDC144B-204ENST00000455629 RMI2Q96E14 147 aa11.61□□□□□ -0.55
CCDC144B-204ENST00000455629 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.6□□□□□ -0.55
CCDC144B-204ENST00000455629 TRBV6-5A0A0K0K1A5 114 aa11.6□□□□□ -0.55
CCDC144B-204ENST00000455629 D6R8Y8 96 aa11.6□□□□□ -0.55
CCDC144B-204ENST00000455629 PPBPP02775 128 aa11.6□□□□□ -0.55
CCDC144B-204ENST00000455629 NRACQ8N912 160 aa11.6□□□□□ -0.55
CCDC144B-204ENST00000455629 PPP1R17O96001 155 aa11.59□□□□□ -0.55
CCDC144B-204ENST00000455629 APCSP02743 223 aa11.59□□□□□ -0.55
CCDC144B-204ENST00000455629 MT-ND6P03923 174 aa11.59□□□□□ -0.55
CCDC144B-204ENST00000455629 ORMDL3Q8N138 153 aa11.59□□□□□ -0.55
CCDC144B-204ENST00000455629 Q8N976 141 aa11.59□□□□□ -0.55
CCDC144B-204ENST00000455629 BAALCQ8WXS3 180 aa11.59□□□□□ -0.55
CCDC144B-204ENST00000455629 ST20Q9HBF5 79 aa11.58□□□□□ -0.56
CCDC144B-204ENST00000455629 SDHAF1A6NFY7 115 aa11.57□□□□□ -0.56
CCDC144B-204ENST00000455629 TNFRSF6BO95407 300 aa11.57□□□□□ -0.56
CCDC144B-204ENST00000455629 NPYP01303 97 aa11.57□□□□□ -0.56
CCDC144B-204ENST00000455629 PRELID3AQ96N28 172 aa11.57□□□□□ -0.56
CCDC144B-204ENST00000455629 MRPL18Q9H0U6 180 aaKnown RBP11.57□□□□□ -0.56
CCDC144B-204ENST00000455629 KIAA1644Q3SXP7 199 aa11.56□□□□□ -0.56
CCDC144B-204ENST00000455629 SCXQ7RTU7 201 aa11.56□□□□□ -0.56
CCDC144B-204ENST00000455629 NIT1Q86X76 327 aa11.56□□□□□ -0.56
CCDC144B-204ENST00000455629 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.56□□□□□ -0.56
CCDC144B-204ENST00000455629 TRAPPC1Q9Y5R8 145 aa11.56□□□□□ -0.56
CCDC144B-204ENST00000455629 IGKV2D-24A0A075B6R9 120 aa11.55□□□□□ -0.56
CCDC144B-204ENST00000455629 COLCA2A8K830 154 aa11.55□□□□□ -0.56
CCDC144B-204ENST00000455629 PHOX2AO14813 284 aa11.55□□□□□ -0.56
CCDC144B-204ENST00000455629 POLR2KP53803 58 aaKnown RBP11.55□□□□□ -0.56
CCDC144B-204ENST00000455629 SUMO2P61956 95 aaKnown RBP11.55□□□□□ -0.56
CCDC144B-204ENST00000455629 FABP9Q0Z7S8 132 aa11.55□□□□□ -0.56
CCDC144B-204ENST00000455629 C20orf78Q9BR46 151 aa11.55□□□□□ -0.56
CCDC144B-204ENST00000455629 CHCHD7Q9BUK0 85 aa11.55□□□□□ -0.56
CCDC144B-204ENST00000455629 LAMTOR2Q9Y2Q5 125 aa11.55□□□□□ -0.56
CCDC144B-204ENST00000455629 LINC01620Q4KN68 170 aa11.54□□□□□ -0.56
CCDC144B-204ENST00000455629 CHAC1Q9BUX1 264 aa11.54□□□□□ -0.56
CCDC144B-204ENST00000455629 KLK12Q9UKR0 248 aa11.54□□□□□ -0.56
CCDC144B-204ENST00000455629 A0A087WX48 190 aa11.53□□□□□ -0.56
CCDC144B-204ENST00000455629 TRBV27A0A0K0K1C4 114 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms