RNA–Protein interactions for RNA: ENST00000455383.5

MSH6-206, Transcript of mutS homolog 6, humanhuman

TSL 5

Gene MSH6, Length 578 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-206ENST00000455383 FAM213BQ8TBF2 198 aa11.67□□□□□ -0.54
MSH6-206ENST00000455383 GTSF1Q8WW33 167 aa11.67□□□□□ -0.54
MSH6-206ENST00000455383 A0A1B0GV50 99 aa11.66□□□□□ -0.54
MSH6-206ENST00000455383 C19orf71A6NCJ1 209 aa11.66□□□□□ -0.54
MSH6-206ENST00000455383 UBE2L6O14933 153 aa11.66□□□□□ -0.54
MSH6-206ENST00000455383 KCNRGQ8N5I3 272 aa11.66□□□□□ -0.54
MSH6-206ENST00000455383 STPG4Q8N801 248 aa11.66□□□□□ -0.54
MSH6-206ENST00000455383 C11orf52Q96A22 123 aa11.66□□□□□ -0.54
MSH6-206ENST00000455383 TPPP3Q9BW30 176 aa11.66□□□□□ -0.54
MSH6-206ENST00000455383 GVQW2A0A096LPI5 108 aaPredicted RBP11.65□□□□□ -0.54
MSH6-206ENST00000455383 IGKV2-24A0A0C4DH68 120 aa11.65□□□□□ -0.54
MSH6-206ENST00000455383 AMTP48728 403 aa11.65□□□□□ -0.54
MSH6-206ENST00000455383 COTL1Q14019 142 aa11.65□□□□□ -0.54
MSH6-206ENST00000455383 HIGD2BQ4VC39 106 aa11.65□□□□□ -0.54
MSH6-206ENST00000455383 OR2D3Q8NGH3 330 aa11.65□□□□□ -0.54
MSH6-206ENST00000455383 F2Z2F3 143 aa11.64□□□□□ -0.55
MSH6-206ENST00000455383 SPINK6Q6UWN8 80 aa11.64□□□□□ -0.55
MSH6-206ENST00000455383 A0A096LNI7 61 aa11.63□□□□□ -0.55
MSH6-206ENST00000455383 TRGC1P0CF51 173 aa11.63□□□□□ -0.55
MSH6-206ENST00000455383 SRSF9Q13242 221 aaKnown RBP eCLIP11.63□□□□□ -0.55
MSH6-206ENST00000455383 CENPWQ5EE01 88 aa11.63□□□□□ -0.55
MSH6-206ENST00000455383 CHCHD10Q8WYQ3 142 aaPredicted RBP11.63□□□□□ -0.55
MSH6-206ENST00000455383 H2AFB1P0C5Y9 115 aa11.62□□□□□ -0.55
MSH6-206ENST00000455383 ZNF345Q14585 488 aa11.62□□□□□ -0.55
MSH6-206ENST00000455383 LYPD6BQ8NI32 183 aa11.62□□□□□ -0.55
MSH6-206ENST00000455383 NTF3P20783 257 aa11.61□□□□□ -0.55
MSH6-206ENST00000455383 REG3GQ6UW15 175 aa11.61□□□□□ -0.55
MSH6-206ENST00000455383 LYZL1Q6UWQ5 148 aa11.61□□□□□ -0.55
MSH6-206ENST00000455383 SMIM12Q96EX1 92 aa11.61□□□□□ -0.55
MSH6-206ENST00000455383 IGKV3OR2-268A0A0C4DH90 116 aa11.6□□□□□ -0.55
MSH6-206ENST00000455383 FOXI1Q12951 378 aa11.6□□□□□ -0.55
MSH6-206ENST00000455383 LINC00474Q9P2X8 69 aa11.6□□□□□ -0.55
MSH6-206ENST00000455383 XKRY2A2RUG3 117 aa11.59□□□□□ -0.55
MSH6-206ENST00000455383 CCL20P78556 96 aa11.59□□□□□ -0.55
MSH6-206ENST00000455383 C9orf62Q8N4C0 152 aa11.59□□□□□ -0.55
MSH6-206ENST00000455383 CNFNQ9BYD5 112 aa11.59□□□□□ -0.55
MSH6-206ENST00000455383 MANBALQ9NQG1 85 aa11.59□□□□□ -0.55
MSH6-206ENST00000455383 RAB19A4D1S5 217 aa11.58□□□□□ -0.56
MSH6-206ENST00000455383 SMLR1H3BR10 107 aa11.58□□□□□ -0.56
MSH6-206ENST00000455383 H7C423 109 aa11.58□□□□□ -0.56
MSH6-206ENST00000455383 NCR2O95944 276 aa11.58□□□□□ -0.56
MSH6-206ENST00000455383 CTRLP40313 264 aa11.58□□□□□ -0.56
MSH6-206ENST00000455383 Q6ZNX1 250 aa11.58□□□□□ -0.56
MSH6-206ENST00000455383 GATD1Q8NB37 220 aa11.58□□□□□ -0.56
MSH6-206ENST00000455383 LPAP08519 4548 aa11.58□□□□□ -0.56
MSH6-206ENST00000455383 IFNA1P01562 189 aa11.57□□□□□ -0.56
MSH6-206ENST00000455383 TRAV1-1A0A0B4J248 108 aa11.56□□□□□ -0.56
MSH6-206ENST00000455383 AMMECR1LQ6DCA0 310 aa11.56□□□□□ -0.56
MSH6-206ENST00000455383 Q6ZRP5 223 aa11.56□□□□□ -0.56
MSH6-206ENST00000455383 GNG13Q9P2W3 67 aa11.56□□□□□ -0.56
MSH6-206ENST00000455383 PKIGQ9Y2B9 76 aa11.56□□□□□ -0.56
MSH6-206ENST00000455383 TRBV20OR9-2A0A075B6H5 130 aa11.55□□□□□ -0.56
MSH6-206ENST00000455383 TRAV26-2A0A0B4J265 109 aa11.55□□□□□ -0.56
MSH6-206ENST00000455383 GNG4P50150 75 aa11.55□□□□□ -0.56
MSH6-206ENST00000455383 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.54□□□□□ -0.56
MSH6-206ENST00000455383 IGKV2-29A2NJV5 120 aaPredicted RBP11.54□□□□□ -0.56
MSH6-206ENST00000455383 HMSDA8MTL9 139 aa11.54□□□□□ -0.56
MSH6-206ENST00000455383 BCL2L11O43521 198 aa11.54□□□□□ -0.56
MSH6-206ENST00000455383 GAS8-AS1O95177 125 aa11.54□□□□□ -0.56
MSH6-206ENST00000455383 FGF6P10767 208 aa11.54□□□□□ -0.56
MSH6-206ENST00000455383 RNASEKQ6P5S7 137 aaKnown RBP11.54□□□□□ -0.56
MSH6-206ENST00000455383 OR5A1Q8NGJ0 315 aa11.54□□□□□ -0.56
MSH6-206ENST00000455383 IGHV1-58A0A0C4DH39 117 aa11.53□□□□□ -0.56
MSH6-206ENST00000455383 TWIST1Q15672 202 aa11.53□□□□□ -0.56
MSH6-206ENST00000455383 RPL39LQ96EH5 51 aaKnown RBP11.53□□□□□ -0.56
MSH6-206ENST00000455383 BIN3Q9NQY0 253 aa11.53□□□□□ -0.56
MSH6-206ENST00000455383 KANTRA0A1W2PQU2 76 aa11.52□□□□□ -0.57
MSH6-206ENST00000455383 APCSP02743 223 aa11.52□□□□□ -0.57
MSH6-206ENST00000455383 ZNF25P17030 456 aaPredicted RBP11.52□□□□□ -0.57
MSH6-206ENST00000455383 NUDT10Q8NFP7 164 aa11.52□□□□□ -0.57
MSH6-206ENST00000455383 NUDT11Q96G61 164 aa11.52□□□□□ -0.57
MSH6-206ENST00000455383 CARD19Q96LW7 228 aa11.52□□□□□ -0.57
MSH6-206ENST00000455383 LINC00959A0A1B0GUT2 108 aa11.51□□□□□ -0.57
MSH6-206ENST00000455383 XCL1P47992 114 aa11.51□□□□□ -0.57
MSH6-206ENST00000455383 EIF5AP63241 154 aaKnown RBP11.51□□□□□ -0.57
MSH6-206ENST00000455383 LINC00526Q96FQ7 95 aa11.51□□□□□ -0.57
MSH6-206ENST00000455383 BATF3Q9NR55 127 aa11.51□□□□□ -0.57
MSH6-206ENST00000455383 FAM231BA6NCW3 169 aa11.5□□□□□ -0.57
MSH6-206ENST00000455383 CCL25O15444 150 aa11.5□□□□□ -0.57
MSH6-206ENST00000455383 PDE6DO43924 150 aa11.5□□□□□ -0.57
MSH6-206ENST00000455383 MEF2BQ02080 365 aaPredicted RBP11.5□□□□□ -0.57
MSH6-206ENST00000455383 SDHAF1A6NFY7 115 aa11.49□□□□□ -0.57
MSH6-206ENST00000455383 PTTG1IPP53801 180 aa11.49□□□□□ -0.57
MSH6-206ENST00000455383 MED9Q9NWA0 146 aa11.49□□□□□ -0.57
MSH6-206ENST00000455383 ESDP10768 282 aa11.48□□□□□ -0.57
MSH6-206ENST00000455383 SYCNQ0VAF6 134 aa11.48□□□□□ -0.57
MSH6-206ENST00000455383 TEX261Q6UWH6 196 aa11.48□□□□□ -0.57
MSH6-206ENST00000455383 TRBV6-5A0A0K0K1A5 114 aa11.47□□□□□ -0.57
MSH6-206ENST00000455383 FOXA3P55318 350 aaPredicted RBP11.47□□□□□ -0.57
MSH6-206ENST00000455383 BTF3L4Q96K17 158 aa11.47□□□□□ -0.57
MSH6-206ENST00000455383 RPP21Q9H633 154 aaKnown RBP11.47□□□□□ -0.57
MSH6-206ENST00000455383 I3L3M4 83 aa11.46□□□□□ -0.57
MSH6-206ENST00000455383 RGS21Q2M5E4 152 aa11.46□□□□□ -0.57
MSH6-206ENST00000455383 CD164L2Q6UWJ8 174 aa11.46□□□□□ -0.57
MSH6-206ENST00000455383 TMEM101Q96IK0 257 aa11.46□□□□□ -0.57
MSH6-206ENST00000455383 A0A1W2PNN7 141 aa11.45□□□□□ -0.58
MSH6-206ENST00000455383 TEX46H3BTG2 121 aa11.45□□□□□ -0.58
MSH6-206ENST00000455383 ZNF561-AS1K7EIQ3 104 aa11.45□□□□□ -0.58
MSH6-206ENST00000455383 RNASE7Q9H1E1 156 aaKnown RBP11.45□□□□□ -0.58
MSH6-206ENST00000455383 CDC42SE2Q9NRR3 84 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms