RNA–Protein interactions for RNA: ENST00000454852.6

TRAF4-206, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 672 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-206ENST00000454852 IQCJQ1A5X6 159 aa7.76□□□□□ -1.17
TRAF4-206ENST00000454852 CASC10Q5T4H9 136 aa7.76□□□□□ -1.17
TRAF4-206ENST00000454852 KIR2DL4Q99706 377 aa7.76□□□□□ -1.17
TRAF4-206ENST00000454852 TRBV6-8A0A0A6YYG3 113 aa7.75□□□□□ -1.17
TRAF4-206ENST00000454852 TSHBP01222 138 aa7.75□□□□□ -1.17
TRAF4-206ENST00000454852 ESDP10768 282 aa7.75□□□□□ -1.17
TRAF4-206ENST00000454852 COTL1Q14019 142 aa7.75□□□□□ -1.17
TRAF4-206ENST00000454852 ESRGQ1W209 222 aa7.75□□□□□ -1.17
TRAF4-206ENST00000454852 LELP1Q5T871 98 aa7.75□□□□□ -1.17
TRAF4-206ENST00000454852 ZFAND6Q6FIF0 208 aa7.75□□□□□ -1.17
TRAF4-206ENST00000454852 NTM-AS1Q6ZSK4 140 aa7.75□□□□□ -1.17
TRAF4-206ENST00000454852 UPK3BQ9BT76 320 aa7.75□□□□□ -1.17
TRAF4-206ENST00000454852 IGHV3-38A0A0C4DH36 116 aa7.74□□□□□ -1.17
TRAF4-206ENST00000454852 IFI27P40305 119 aaPredicted RBP7.74□□□□□ -1.17
TRAF4-206ENST00000454852 COA6Q5JTJ3 125 aaKnown RBP7.74□□□□□ -1.17
TRAF4-206ENST00000454852 URB1-AS1Q96HZ7 61 aa7.74□□□□□ -1.17
TRAF4-206ENST00000454852 MRPS16Q9Y3D3 137 aaKnown RBP7.74□□□□□ -1.17
TRAF4-206ENST00000454852 DNAH1Q9P2D7 4330 aa7.74□□□□□ -1.17
TRAF4-206ENST00000454852 IGHV1-24A0A0C4DH33 117 aa7.73□□□□□ -1.17
TRAF4-206ENST00000454852 LOC389332A0A1B0GUA5 103 aa7.73□□□□□ -1.17
TRAF4-206ENST00000454852 H7C423 109 aa7.73□□□□□ -1.17
TRAF4-206ENST00000454852 CCL18P55774 89 aa7.73□□□□□ -1.17
TRAF4-206ENST00000454852 ORMDL2Q53FV1 153 aa7.73□□□□□ -1.17
TRAF4-206ENST00000454852 PRSS3P2Q8NHM4 247 aa7.73□□□□□ -1.17
TRAF4-206ENST00000454852 CHCHD1Q96BP2 118 aaKnown RBP7.73□□□□□ -1.17
TRAF4-206ENST00000454852 CHCHD7Q9BUK0 85 aa7.73□□□□□ -1.17
TRAF4-206ENST00000454852 ALMS1Q8TCU4 4167 aa7.73□□□□□ -1.17
TRAF4-206ENST00000454852 TRBV25-1A0A075B6N4 114 aa7.72□□□□□ -1.17
TRAF4-206ENST00000454852 LINC00614P0C842 121 aa7.72□□□□□ -1.17
TRAF4-206ENST00000454852 LAGE3Q14657 143 aa7.72□□□□□ -1.17
TRAF4-206ENST00000454852 NIT1Q86X76 327 aa7.72□□□□□ -1.17
TRAF4-206ENST00000454852 AP5S1Q9NUS5 200 aa7.72□□□□□ -1.17
TRAF4-206ENST00000454852 LINC00588Q9Y4M8 146 aa7.72□□□□□ -1.17
TRAF4-206ENST00000454852 LINC01549A6NIU2 74 aa7.71□□□□□ -1.18
TRAF4-206ENST00000454852 G0S2P27469 103 aa7.71□□□□□ -1.18
TRAF4-206ENST00000454852 FCER1GP30273 86 aa7.71□□□□□ -1.18
TRAF4-206ENST00000454852 AKR1D1P51857 326 aa7.71□□□□□ -1.18
TRAF4-206ENST00000454852 PKIAP61925 76 aa7.71□□□□□ -1.18
TRAF4-206ENST00000454852 LGALS9CQ6DKI2 356 aa7.71□□□□□ -1.18
TRAF4-206ENST00000454852 FA2HQ7L5A8 372 aa7.71□□□□□ -1.18
TRAF4-206ENST00000454852 C20orf203Q8NBC4 194 aa7.71□□□□□ -1.18
TRAF4-206ENST00000454852 TMEM243Q9BU79 118 aa7.71□□□□□ -1.18
TRAF4-206ENST00000454852 TRAV8-6A0A0B4J262 113 aa7.7□□□□□ -1.18
TRAF4-206ENST00000454852 AMTP48728 403 aa7.7□□□□□ -1.18
TRAF4-206ENST00000454852 LINC00310P59036 64 aa7.7□□□□□ -1.18
TRAF4-206ENST00000454852 BAGE3Q86Y29 109 aa7.7□□□□□ -1.18
TRAF4-206ENST00000454852 DNAH6Q9C0G6 4158 aa7.69□□□□□ -1.18
TRAF4-206ENST00000454852 A0A1B0GUV1 79 aa7.69□□□□□ -1.18
TRAF4-206ENST00000454852 DNAH10OSP0CZ25 163 aa7.69□□□□□ -1.18
TRAF4-206ENST00000454852 MRPL52Q86TS9 123 aaKnown RBP7.69□□□□□ -1.18
TRAF4-206ENST00000454852 HIST3H2BBQ8N257 126 aa7.69□□□□□ -1.18
TRAF4-206ENST00000454852 TMEM18Q96B42 140 aa7.69□□□□□ -1.18
TRAF4-206ENST00000454852 TIMM21Q9BVV7 248 aa7.69□□□□□ -1.18
TRAF4-206ENST00000454852 CSDC2Q9Y534 153 aaKnown RBP7.69□□□□□ -1.18
TRAF4-206ENST00000454852 TENM2Q9NT68 2774 aa7.68□□□□□ -1.18
TRAF4-206ENST00000454852 K7EP13 123 aa7.68□□□□□ -1.18
TRAF4-206ENST00000454852 SERF1AO75920 110 aa7.68□□□□□ -1.18
TRAF4-206ENST00000454852 NPSP0C0P6 89 aa7.68□□□□□ -1.18
TRAF4-206ENST00000454852 ZNF25P17030 456 aaPredicted RBP7.68□□□□□ -1.18
TRAF4-206ENST00000454852 SMAGPQ0VAQ4 97 aa7.68□□□□□ -1.18
TRAF4-206ENST00000454852 LINC01556Q5JQF7 62 aa7.68□□□□□ -1.18
TRAF4-206ENST00000454852 LYSTQ99698 3801 aa7.68□□□□□ -1.18
TRAF4-206ENST00000454852 PYGO1Q9Y3Y4 419 aa7.68□□□□□ -1.18
TRAF4-206ENST00000454852 A0A096LNJ9 63 aa7.67□□□□□ -1.18
TRAF4-206ENST00000454852 IFITM10A6NMD0 228 aa7.67□□□□□ -1.18
TRAF4-206ENST00000454852 S100A2P29034 98 aa7.67□□□□□ -1.18
TRAF4-206ENST00000454852 RNASEKQ6P5S7 137 aaKnown RBP7.67□□□□□ -1.18
TRAF4-206ENST00000454852 C2orf66Q6UXQ4 117 aa7.67□□□□□ -1.18
TRAF4-206ENST00000454852 WFDC10BQ8IUB3 73 aa7.67□□□□□ -1.18
TRAF4-206ENST00000454852 TOMM6Q96B49 74 aa7.67□□□□□ -1.18
TRAF4-206ENST00000454852 CHCHD5Q9BSY4 110 aa7.67□□□□□ -1.18
TRAF4-206ENST00000454852 CYSLTR1Q9Y271 337 aa7.67□□□□□ -1.18
TRAF4-206ENST00000454852 UBE2D4Q9Y2X8 147 aa7.67□□□□□ -1.18
TRAF4-206ENST00000454852 UBE2L6O14933 153 aa7.66□□□□□ -1.18
TRAF4-206ENST00000454852 SIVA1O15304 175 aa7.66□□□□□ -1.18
TRAF4-206ENST00000454852 HSBP1O75506 76 aa7.66□□□□□ -1.18
TRAF4-206ENST00000454852 HBDP02042 147 aa7.66□□□□□ -1.18
TRAF4-206ENST00000454852 FGF6P10767 208 aa7.66□□□□□ -1.18
TRAF4-206ENST00000454852 DEFB104AQ8WTQ1 72 aa7.66□□□□□ -1.18
TRAF4-206ENST00000454852 LINC00476Q8WZB0 136 aa7.66□□□□□ -1.18
TRAF4-206ENST00000454852 SPANXA1Q9NS26 97 aa7.66□□□□□ -1.18
TRAF4-206ENST00000454852 SACSQ9NZJ4 4579 aa7.66□□□□□ -1.18
TRAF4-206ENST00000454852 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.65□□□□□ -1.18
TRAF4-206ENST00000454852 IGKV2-29A2NJV5 120 aaPredicted RBP7.65□□□□□ -1.18
TRAF4-206ENST00000454852 IGIPA6NJ69 53 aa7.65□□□□□ -1.18
TRAF4-206ENST00000454852 NUPR1O60356 82 aa7.65□□□□□ -1.18
TRAF4-206ENST00000454852 RBX1P62877 108 aa7.65□□□□□ -1.18
TRAF4-206ENST00000454852 MRPS36P82909 103 aaKnown RBP7.65□□□□□ -1.18
TRAF4-206ENST00000454852 GAGE6Q13070 117 aa7.65□□□□□ -1.18
TRAF4-206ENST00000454852 PDZD11Q5EBL8 140 aa7.65□□□□□ -1.18
TRAF4-206ENST00000454852 UBE2DNLQ8IWF7 75 aa7.65□□□□□ -1.18
TRAF4-206ENST00000454852 LINC00518Q8N0U6 118 aa7.65□□□□□ -1.18
TRAF4-206ENST00000454852 PACRGQ96M98 296 aaPredicted RBP7.65□□□□□ -1.18
TRAF4-206ENST00000454852 TIMM17AQ99595 171 aa7.65□□□□□ -1.18
TRAF4-206ENST00000454852 Q9H8V8 135 aa7.65□□□□□ -1.18
TRAF4-206ENST00000454852 BTF3P20290 206 aaKnown RBP7.64□□□□□ -1.19
TRAF4-206ENST00000454852 RPL39P62891 51 aaKnown RBP7.64□□□□□ -1.19
TRAF4-206ENST00000454852 MPV17L2Q567V2 206 aa7.64□□□□□ -1.19
TRAF4-206ENST00000454852 ERASQ7Z444 233 aa7.64□□□□□ -1.19
TRAF4-206ENST00000454852 FAM104AQ969W3 186 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms