RNA–Protein interactions for RNA: ENST00000454612.6

DDR1-240, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene DDR1, Length 3,942 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-240ENST00000454612 SUMO4Q6EEV6 95 aa8.42□□□□□ -1.06
DDR1-240ENST00000454612 TRPT1Q86TN4 253 aaKnown RBP8.42□□□□□ -1.06
DDR1-240ENST00000454612 TMEM190Q8WZ59 177 aa8.42□□□□□ -1.06
DDR1-240ENST00000454612 HIST1H4AP62805 103 aaKnown RBP8.42□□□□□ -1.06
DDR1-240ENST00000454612 ZNF493Q6ZR52 646 aa8.42□□□□□ -1.06
DDR1-240ENST00000454612 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.41□□□□□ -1.06
DDR1-240ENST00000454612 IGKV2-29A2NJV5 120 aaPredicted RBP8.41□□□□□ -1.06
DDR1-240ENST00000454612 KRTAP10-9P60411 292 aa8.41□□□□□ -1.06
DDR1-240ENST00000454612 C5orf47Q569G3 176 aa8.41□□□□□ -1.06
DDR1-240ENST00000454612 HIGD1BQ9P298 99 aa8.41□□□□□ -1.06
DDR1-240ENST00000454612 A0A087WX48 190 aa8.41□□□□□ -1.06
DDR1-240ENST00000454612 STHQ8IWL8 128 aa8.41□□□□□ -1.06
DDR1-240ENST00000454612 RASL10AQ92737 203 aa8.41□□□□□ -1.06
DDR1-240ENST00000454612 A0A0J9YXV3 536 aa8.41□□□□□ -1.06
DDR1-240ENST00000454612 DNAL4O96015 105 aa8.41□□□□□ -1.06
DDR1-240ENST00000454612 DAND5Q8N907 189 aa8.41□□□□□ -1.06
DDR1-240ENST00000454612 CELSR2Q9HCU4 2923 aa8.41□□□□□ -1.06
DDR1-240ENST00000454612 IGHV1OR15-1A0A075B7D0 117 aa8.4□□□□□ -1.06
DDR1-240ENST00000454612 M0R2P5 195 aa8.4□□□□□ -1.06
DDR1-240ENST00000454612 HTN3P15516 51 aa8.4□□□□□ -1.06
DDR1-240ENST00000454612 ZFAND2AQ8N6M9 145 aa8.4□□□□□ -1.06
DDR1-240ENST00000454612 PPDPFQ9H3Y8 114 aa8.4□□□□□ -1.06
DDR1-240ENST00000454612 GCN1Q92616 2671 aaKnown RBP8.4□□□□□ -1.07
DDR1-240ENST00000454612 TCL1BO95988 128 aa8.4□□□□□ -1.07
DDR1-240ENST00000454612 IGHG2P01859 326 aa8.4□□□□□ -1.07
DDR1-240ENST00000454612 C9orf47Q6ZRZ4 202 aa8.4□□□□□ -1.07
DDR1-240ENST00000454612 TMEM126AQ9H061 195 aa8.4□□□□□ -1.07
DDR1-240ENST00000454612 VPS13CQ709C8 3753 aa8.4□□□□□ -1.07
DDR1-240ENST00000454612 A0A096LPF7 62 aa8.39□□□□□ -1.07
DDR1-240ENST00000454612 J3KT08 172 aa8.39□□□□□ -1.07
DDR1-240ENST00000454612 EBI3Q14213 229 aa8.39□□□□□ -1.07
DDR1-240ENST00000454612 C11orf86A6NJI1 115 aa8.39□□□□□ -1.07
DDR1-240ENST00000454612 PLEKHB2Q96CS7 222 aa8.39□□□□□ -1.07
DDR1-240ENST00000454612 FAM110AQ9BQ89 295 aa8.39□□□□□ -1.07
DDR1-240ENST00000454612 TRACP01848 142 aa8.38□□□□□ -1.07
DDR1-240ENST00000454612 DEFB130BP0DP73 79 aa8.38□□□□□ -1.07
DDR1-240ENST00000454612 DEFB130AP0DP74 79 aa8.38□□□□□ -1.07
DDR1-240ENST00000454612 PLA2G2AP14555 144 aa8.38□□□□□ -1.07
DDR1-240ENST00000454612 BAALCQ8WXS3 180 aa8.38□□□□□ -1.07
DDR1-240ENST00000454612 TEX49A0A1B0GTD5 131 aa8.37□□□□□ -1.07
DDR1-240ENST00000454612 A8MZ25 164 aa8.37□□□□□ -1.07
DDR1-240ENST00000454612 PIFOQ8TCI5 191 aa8.37□□□□□ -1.07
DDR1-240ENST00000454612 CARD19Q96LW7 228 aa8.37□□□□□ -1.07
DDR1-240ENST00000454612 TRGV11A0A075B6L2 103 aa8.37□□□□□ -1.07
DDR1-240ENST00000454612 TMEM61Q8N0U2 210 aa8.37□□□□□ -1.07
DDR1-240ENST00000454612 ZNRF2Q8NHG8 242 aa8.37□□□□□ -1.07
DDR1-240ENST00000454612 TM2D2Q9BX73 214 aa8.37□□□□□ -1.07
DDR1-240ENST00000454612 UBR5O95071 2799 aaPredicted RBP8.37□□□□□ -1.07
DDR1-240ENST00000454612 PAPPA-AS1Q5QFB9 102 aa8.37□□□□□ -1.07
DDR1-240ENST00000454612 ATP6V0E2Q8NHE4 81 aa8.37□□□□□ -1.07
DDR1-240ENST00000454612 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.36□□□□□ -1.07
DDR1-240ENST00000454612 RBAKDNA6NC62 111 aa8.36□□□□□ -1.07
DDR1-240ENST00000454612 A6NDX4 124 aa8.36□□□□□ -1.07
DDR1-240ENST00000454612 ESM1Q9NQ30 184 aa8.36□□□□□ -1.07
DDR1-240ENST00000454612 UBE2L6O14933 153 aa8.36□□□□□ -1.07
DDR1-240ENST00000454612 CFC1BP0CG36 223 aa8.36□□□□□ -1.07
DDR1-240ENST00000454612 CFC1P0CG37 223 aa8.36□□□□□ -1.07
DDR1-240ENST00000454612 PPP1R17O96001 155 aa8.36□□□□□ -1.07
DDR1-240ENST00000454612 RNASE3P12724 160 aaKnown RBP8.35□□□□□ -1.07
DDR1-240ENST00000454612 CIRBPQ14011 172 aaKnown RBP8.35□□□□□ -1.07
DDR1-240ENST00000454612 NRACQ8N912 160 aa8.35□□□□□ -1.07
DDR1-240ENST00000454612 A4D1N5 150 aa8.35□□□□□ -1.07
DDR1-240ENST00000454612 LINC00694P0DN24 101 aa8.35□□□□□ -1.07
DDR1-240ENST00000454612 CFAP126Q5VTH2 177 aa8.35□□□□□ -1.07
DDR1-240ENST00000454612 NFE4Q86UQ8 179 aa8.35□□□□□ -1.07
DDR1-240ENST00000454612 PKIGQ9Y2B9 76 aa8.35□□□□□ -1.07
DDR1-240ENST00000454612 LOC107984640A0A0U1RRK4 108 aa8.35□□□□□ -1.07
DDR1-240ENST00000454612 TRBV6-1A0A0K0K1D8 114 aa8.34□□□□□ -1.07
DDR1-240ENST00000454612 LINC01620Q4KN68 170 aa8.34□□□□□ -1.07
DDR1-240ENST00000454612 J3QQQ9 107 aa8.34□□□□□ -1.07
DDR1-240ENST00000454612 C19orf54Q5BKX5 351 aa8.34□□□□□ -1.07
DDR1-240ENST00000454612 VPREB3Q9UKI3 123 aa8.34□□□□□ -1.07
DDR1-240ENST00000454612 CLPSL2Q6UWE3 100 aa8.34□□□□□ -1.08
DDR1-240ENST00000454612 CDIP1Q9H305 208 aa8.34□□□□□ -1.08
DDR1-240ENST00000454612 RHODO00212 210 aa8.33□□□□□ -1.08
DDR1-240ENST00000454612 PF4P02776 101 aa8.33□□□□□ -1.08
DDR1-240ENST00000454612 PEMTQ9UBM1 199 aa8.33□□□□□ -1.08
DDR1-240ENST00000454612 HERVK_113P63121 156 aa8.33□□□□□ -1.08
DDR1-240ENST00000454612 TRGV4A0A0C4DH28 118 aa8.33□□□□□ -1.08
DDR1-240ENST00000454612 LGALS1P09382 135 aaKnown RBP8.33□□□□□ -1.08
DDR1-240ENST00000454612 WFDC11Q8NEX6 87 aa8.33□□□□□ -1.08
DDR1-240ENST00000454612 CITED2Q99967 270 aaPredicted RBP8.33□□□□□ -1.08
DDR1-240ENST00000454612 WFDC10AQ9H1F0 79 aa8.33□□□□□ -1.08
DDR1-240ENST00000454612 HHLA3Q9XRX5 114 aa8.33□□□□□ -1.08
DDR1-240ENST00000454612 ITPR2Q14571 2701 aa8.32□□□□□ -1.08
DDR1-240ENST00000454612 MGAM2Q2M2H8 2515 aa8.32□□□□□ -1.08
DDR1-240ENST00000454612 TIMM21Q9BVV7 248 aa8.32□□□□□ -1.08
DDR1-240ENST00000454612 ZNF580Q9UK33 172 aa8.32□□□□□ -1.08
DDR1-240ENST00000454612 U3KQE9 123 aa8.32□□□□□ -1.08
DDR1-240ENST00000454612 F8P00451 2351 aa8.32□□□□□ -1.08
DDR1-240ENST00000454612 GPHB5Q86YW7 130 aa8.32□□□□□ -1.08
DDR1-240ENST00000454612 U3KQK5 164 aa8.32□□□□□ -1.08
DDR1-240ENST00000454612 A0A0J9YX75 114 aa8.31□□□□□ -1.08
DDR1-240ENST00000454612 LINC01619G3V211 115 aa8.31□□□□□ -1.08
DDR1-240ENST00000454612 DEFB4AO15263 64 aa8.31□□□□□ -1.08
DDR1-240ENST00000454612 NOP10Q9NPE3 64 aaKnown RBP8.31□□□□□ -1.08
DDR1-240ENST00000454612 Q9UF83 564 aa8.31□□□□□ -1.08
DDR1-240ENST00000454612 I3L3M4 83 aa8.31□□□□□ -1.08
DDR1-240ENST00000454612 NDUFA11Q86Y39 141 aa8.31□□□□□ -1.08
DDR1-240ENST00000454612 MRPL53Q96EL3 112 aaKnown RBP8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms