RNA–Protein interactions for RNA: ENST00000454468.5

SMPD4-213, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 1 (best)

Gene SMPD4, Length 3,586 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-213ENST00000454468 PF4P02776 101 aa8.84□□□□□ -0.99
SMPD4-213ENST00000454468 ZNF415Q09FC8 603 aa8.84□□□□□ -0.99
SMPD4-213ENST00000454468 PLEKHB2Q96CS7 222 aa8.84□□□□□ -0.99
SMPD4-213ENST00000454468 TEP1Q99973 2627 aaKnown RBP8.84□□□□□ -0.99
SMPD4-213ENST00000454468 H3BMM0 161 aa8.84□□□□□ -0.99
SMPD4-213ENST00000454468 RRN3P1Q2M238 152 aa8.84□□□□□ -0.99
SMPD4-213ENST00000454468 C3orf56Q8N813 242 aa8.84□□□□□ -0.99
SMPD4-213ENST00000454468 ZNRF2Q8NHG8 242 aa8.84□□□□□ -0.99
SMPD4-213ENST00000454468 MAP6D1Q9H9H5 199 aa8.84□□□□□ -0.99
SMPD4-213ENST00000454468 PGPEP1Q9NXJ5 209 aa8.84□□□□□ -0.99
SMPD4-213ENST00000454468 IGHV4-4A0A075B6R2 117 aa8.84□□□□□ -0.99
SMPD4-213ENST00000454468 I3L3M4 83 aa8.84□□□□□ -0.99
SMPD4-213ENST00000454468 INSP01308 110 aa8.84□□□□□ -0.99
SMPD4-213ENST00000454468 TRBV20-1A0A075B6N2 111 aa8.83□□□□□ -1
SMPD4-213ENST00000454468 GAGE13Q4V321 117 aa8.83□□□□□ -1
SMPD4-213ENST00000454468 LINC01549A6NIU2 74 aa8.83□□□□□ -1
SMPD4-213ENST00000454468 CRYGDP07320 174 aa8.83□□□□□ -1
SMPD4-213ENST00000454468 RBMY1A1P0DJD3 496 aaKnown RBP8.83□□□□□ -1
SMPD4-213ENST00000454468 RBMY1CP0DJD4 496 aa8.83□□□□□ -1
SMPD4-213ENST00000454468 INSL3P51460 131 aa8.83□□□□□ -1
SMPD4-213ENST00000454468 RBMY1FQ15415 496 aaKnown RBP8.83□□□□□ -1
SMPD4-213ENST00000454468 TEX29Q8N6K0 151 aa8.83□□□□□ -1
SMPD4-213ENST00000454468 NEXN-AS1Q8NBZ9 246 aa8.83□□□□□ -1
SMPD4-213ENST00000454468 GAGE12JA6NER3 117 aa8.83□□□□□ -1
SMPD4-213ENST00000454468 GAGE4Q13068 117 aa8.83□□□□□ -1
SMPD4-213ENST00000454468 UBR5O95071 2799 aaPredicted RBP8.83□□□□□ -1
SMPD4-213ENST00000454468 TRAV13-1A0A0B4J241 112 aa8.82□□□□□ -1
SMPD4-213ENST00000454468 MT-ATP8P03928 68 aa8.82□□□□□ -1
SMPD4-213ENST00000454468 M0QY20 66 aa8.82□□□□□ -1
SMPD4-213ENST00000454468 GAGE7O76087 117 aa8.82□□□□□ -1
SMPD4-213ENST00000454468 GAGE12FP0CL80 117 aa8.82□□□□□ -1
SMPD4-213ENST00000454468 GAGE12GP0CL81 117 aa8.82□□□□□ -1
SMPD4-213ENST00000454468 GAGE12IP0CL82 117 aa8.82□□□□□ -1
SMPD4-213ENST00000454468 C12orf74Q32Q52 190 aa8.82□□□□□ -1
SMPD4-213ENST00000454468 DEFB130BP0DP73 79 aa8.82□□□□□ -1
SMPD4-213ENST00000454468 DEFB130AP0DP74 79 aa8.82□□□□□ -1
SMPD4-213ENST00000454468 TTC32Q5I0X7 151 aa8.82□□□□□ -1
SMPD4-213ENST00000454468 NOP10Q9NPE3 64 aaKnown RBP8.82□□□□□ -1
SMPD4-213ENST00000454468 DEFB114Q30KQ6 69 aa8.81□□□□□ -1
SMPD4-213ENST00000454468 J3QKU1 62 aa8.81□□□□□ -1
SMPD4-213ENST00000454468 ZFAND6Q6FIF0 208 aa8.81□□□□□ -1
SMPD4-213ENST00000454468 C1QTNF4Q9BXJ3 329 aa8.81□□□□□ -1
SMPD4-213ENST00000454468 TRAV8-3A0A0A6YYJ7 113 aa8.81□□□□□ -1
SMPD4-213ENST00000454468 A8MZ25 164 aa8.8□□□□□ -1
SMPD4-213ENST00000454468 M0R2P5 195 aa8.8□□□□□ -1
SMPD4-213ENST00000454468 J3QQQ9 107 aa8.8□□□□□ -1
SMPD4-213ENST00000454468 RPL32P62910 135 aaKnown RBP8.8□□□□□ -1
SMPD4-213ENST00000454468 A0A096LNT2 108 aa8.79□□□□□ -1
SMPD4-213ENST00000454468 RBMY1BA6NDE4 496 aaKnown RBP8.79□□□□□ -1
SMPD4-213ENST00000454468 RBMY1EA6NEQ0 496 aaKnown RBP8.79□□□□□ -1
SMPD4-213ENST00000454468 RBMY1DP0C7P1 496 aaKnown RBP8.79□□□□□ -1
SMPD4-213ENST00000454468 POLR2KP53803 58 aaKnown RBP8.79□□□□□ -1
SMPD4-213ENST00000454468 C4orf3Q8WVX3 66 aa8.79□□□□□ -1
SMPD4-213ENST00000454468 ESM1Q9NQ30 184 aa8.79□□□□□ -1
SMPD4-213ENST00000454468 ZNF580Q9UK33 172 aa8.79□□□□□ -1
SMPD4-213ENST00000454468 LGALS9O00182 355 aa8.79□□□□□ -1
SMPD4-213ENST00000454468 MED14OSP0DP75 135 aa8.79□□□□□ -1
SMPD4-213ENST00000454468 LINC00315P59091 139 aa8.79□□□□□ -1
SMPD4-213ENST00000454468 KLK9Q2XQG4 91 aa8.79□□□□□ -1
SMPD4-213ENST00000454468 TOMM7Q9P0U1 55 aa8.79□□□□□ -1
SMPD4-213ENST00000454468 PLA2G2AP14555 144 aa8.79□□□□□ -1
SMPD4-213ENST00000454468 SPANXB1Q9NS25 103 aaPredicted RBP8.79□□□□□ -1
SMPD4-213ENST00000454468 KIF25-AS1Q9Y6Z4 181 aa8.79□□□□□ -1
SMPD4-213ENST00000454468 A0A096LPF7 62 aa8.78□□□□□ -1
SMPD4-213ENST00000454468 PAPPA-AS1Q5QFB9 102 aa8.78□□□□□ -1
SMPD4-213ENST00000454468 Q6ZSN1 163 aa8.78□□□□□ -1
SMPD4-213ENST00000454468 FAM19A4Q96LR4 140 aa8.78□□□□□ -1
SMPD4-213ENST00000454468 TRAV12-1A0A0B4J245 112 aa8.78□□□□□ -1
SMPD4-213ENST00000454468 TRGV4A0A0C4DH28 118 aa8.78□□□□□ -1
SMPD4-213ENST00000454468 TMEM89A2RUT3 159 aa8.78□□□□□ -1
SMPD4-213ENST00000454468 A8MWV9 139 aa8.78□□□□□ -1
SMPD4-213ENST00000454468 Q6ZTI0 123 aa8.78□□□□□ -1
SMPD4-213ENST00000454468 DAND5Q8N907 189 aa8.78□□□□□ -1
SMPD4-213ENST00000454468 C9orf85Q96MD7 179 aa8.78□□□□□ -1
SMPD4-213ENST00000454468 IGLL5B9A064 214 aa8.77□□□□□ -1
SMPD4-213ENST00000454468 UBE2L6O14933 153 aa8.77□□□□□ -1
SMPD4-213ENST00000454468 TMEM141Q96I45 108 aa8.77□□□□□ -1
SMPD4-213ENST00000454468 E9PLD3 99 aa8.77□□□□□ -1.01
SMPD4-213ENST00000454468 TSHBP01222 138 aa8.77□□□□□ -1.01
SMPD4-213ENST00000454468 C20orf203Q8NBC4 194 aa8.77□□□□□ -1.01
SMPD4-213ENST00000454468 ZMAT4Q9H898 229 aa8.77□□□□□ -1.01
SMPD4-213ENST00000454468 F8P00451 2351 aa8.77□□□□□ -1.01
SMPD4-213ENST00000454468 TIMM21Q9BVV7 248 aa8.77□□□□□ -1.01
SMPD4-213ENST00000454468 HTN3P15516 51 aa8.76□□□□□ -1.01
SMPD4-213ENST00000454468 ODF3L2Q3SX64 289 aa8.76□□□□□ -1.01
SMPD4-213ENST00000454468 LINC01006Q8NI28 216 aa8.76□□□□□ -1.01
SMPD4-213ENST00000454468 ERG28Q9UKR5 140 aa8.76□□□□□ -1.01
SMPD4-213ENST00000454468 TMEM262E9PQX1 116 aa8.76□□□□□ -1.01
SMPD4-213ENST00000454468 F8W1H4 67 aa8.76□□□□□ -1.01
SMPD4-213ENST00000454468 DEFB4AO15263 64 aa8.76□□□□□ -1.01
SMPD4-213ENST00000454468 GAGE2BQ13066 116 aa8.75□□□□□ -1.01
SMPD4-213ENST00000454468 GAGE2EQ4V326 116 aa8.75□□□□□ -1.01
SMPD4-213ENST00000454468 GAGE2DQ9UEU5 116 aa8.75□□□□□ -1.01
SMPD4-213ENST00000454468 TRBV27A0A0K0K1C4 114 aa8.75□□□□□ -1.01
SMPD4-213ENST00000454468 IGIPA6NJ69 53 aa8.75□□□□□ -1.01
SMPD4-213ENST00000454468 BRI3O95415 125 aa8.75□□□□□ -1.01
SMPD4-213ENST00000454468 MEIG1Q5JSS6 88 aa8.75□□□□□ -1.01
SMPD4-213ENST00000454468 MORN3Q6PF18 240 aaPredicted RBP8.75□□□□□ -1.01
SMPD4-213ENST00000454468 SPATA25Q9BR10 227 aa8.75□□□□□ -1.01
SMPD4-213ENST00000454468 C11orf68Q9H3H3 251 aaKnown RBP8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms