RNA–Protein interactions for RNA: ENST00000453744.6

UBE2D3-210, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE2D3, Length 3,990 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-210ENST00000453744 IGHV3-53P01767 116 aa10.34□□□□□ -0.75
UBE2D3-210ENST00000453744 HERV-K104P63124 156 aa10.34□□□□□ -0.75
UBE2D3-210ENST00000453744 CHCHD5Q9BSY4 110 aa10.34□□□□□ -0.75
UBE2D3-210ENST00000453744 U3KQE9 123 aa10.34□□□□□ -0.75
UBE2D3-210ENST00000453744 DEFB131AP59861 70 aa10.33□□□□□ -0.76
UBE2D3-210ENST00000453744 RHOHQ15669 191 aa10.33□□□□□ -0.76
UBE2D3-210ENST00000453744 MUC4Q99102 2169 aa10.33□□□□□ -0.76
UBE2D3-210ENST00000453744 TRGV11A0A075B6L2 103 aa10.33□□□□□ -0.76
UBE2D3-210ENST00000453744 TMEM263Q8WUH6 116 aaKnown RBP10.33□□□□□ -0.76
UBE2D3-210ENST00000453744 PIMREGQ9BSJ6 248 aa10.33□□□□□ -0.76
UBE2D3-210ENST00000453744 YAE1D1Q9NRH1 226 aa10.33□□□□□ -0.76
UBE2D3-210ENST00000453744 IGLV4-3A0A075B6K6 122 aa10.33□□□□□ -0.76
UBE2D3-210ENST00000453744 MED14OSP0DP75 135 aa10.33□□□□□ -0.76
UBE2D3-210ENST00000453744 M0QY20 66 aa10.32□□□□□ -0.76
UBE2D3-210ENST00000453744 HECTD1Q9ULT8 2610 aa10.32□□□□□ -0.76
UBE2D3-210ENST00000453744 IGHV4OR15-8A0A075B7B6 117 aa10.32□□□□□ -0.76
UBE2D3-210ENST00000453744 A0A087WW49 117 aa10.32□□□□□ -0.76
UBE2D3-210ENST00000453744 TRBV27A0A0K0K1C4 114 aa10.32□□□□□ -0.76
UBE2D3-210ENST00000453744 LMO4P61968 165 aa10.32□□□□□ -0.76
UBE2D3-210ENST00000453744 PRIMA1Q86XR5 153 aa10.32□□□□□ -0.76
UBE2D3-210ENST00000453744 A0A0B4J2C4 111 aa10.31□□□□□ -0.76
UBE2D3-210ENST00000453744 DYNLRB2Q8TF09 96 aa10.31□□□□□ -0.76
UBE2D3-210ENST00000453744 ZNF292O60281 2723 aa10.31□□□□□ -0.76
UBE2D3-210ENST00000453744 C10orf99Q6UWK7 81 aa10.31□□□□□ -0.76
UBE2D3-210ENST00000453744 A0A1W2PPR1 153 aa10.31□□□□□ -0.76
UBE2D3-210ENST00000453744 C19orf54Q5BKX5 351 aa10.31□□□□□ -0.76
UBE2D3-210ENST00000453744 MAPK1IP1LQ8NDC0 245 aa10.31□□□□□ -0.76
UBE2D3-210ENST00000453744 TMEM101Q96IK0 257 aa10.31□□□□□ -0.76
UBE2D3-210ENST00000453744 FAM236AA0A1B0GUQ0 79 aa10.3□□□□□ -0.76
UBE2D3-210ENST00000453744 FAM236BA0A1B0GV22 79 aa10.3□□□□□ -0.76
UBE2D3-210ENST00000453744 GAGE2AQ6NT46 116 aa10.3□□□□□ -0.76
UBE2D3-210ENST00000453744 OR13C6PQ8NH95 151 aa10.3□□□□□ -0.76
UBE2D3-210ENST00000453744 Q9H8V8 135 aa10.3□□□□□ -0.76
UBE2D3-210ENST00000453744 IGHV4-61A0A0C4DH41 118 aa10.3□□□□□ -0.76
UBE2D3-210ENST00000453744 DNAL4O96015 105 aa10.3□□□□□ -0.76
UBE2D3-210ENST00000453744 HOXD3P31249 432 aaPredicted RBP10.3□□□□□ -0.76
UBE2D3-210ENST00000453744 RELNP78509 3460 aa10.29□□□□□ -0.76
UBE2D3-210ENST00000453744 SPENQ96T58 3664 aaKnown RBP10.29□□□□□ -0.76
UBE2D3-210ENST00000453744 C9orf153Q5TBE3 101 aa10.29□□□□□ -0.76
UBE2D3-210ENST00000453744 UBE2E2Q96LR5 201 aa10.29□□□□□ -0.76
UBE2D3-210ENST00000453744 LGALS9O00182 355 aa10.28□□□□□ -0.76
UBE2D3-210ENST00000453744 RNASE1P07998 156 aaKnown RBP10.28□□□□□ -0.76
UBE2D3-210ENST00000453744 C11orf71Q6IPW1 123 aa10.28□□□□□ -0.76
UBE2D3-210ENST00000453744 CCL19Q99731 98 aa10.28□□□□□ -0.76
UBE2D3-210ENST00000453744 LINC00315P59091 139 aa10.28□□□□□ -0.76
UBE2D3-210ENST00000453744 RNF223E7ERA6 249 aa10.28□□□□□ -0.76
UBE2D3-210ENST00000453744 ADAMTSL4-AS1Q5T5F5 129 aa10.28□□□□□ -0.76
UBE2D3-210ENST00000453744 C11orf44Q8N8P7 122 aa10.28□□□□□ -0.76
UBE2D3-210ENST00000453744 KIF25-AS1Q9Y6Z4 181 aa10.28□□□□□ -0.76
UBE2D3-210ENST00000453744 IGHV1-58A0A0C4DH39 117 aa10.27□□□□□ -0.76
UBE2D3-210ENST00000453744 TRBV7-9A0A0J9YWB2 115 aa10.27□□□□□ -0.76
UBE2D3-210ENST00000453744 DEFB136Q30KP8 78 aa10.27□□□□□ -0.76
UBE2D3-210ENST00000453744 H7C423 109 aa10.27□□□□□ -0.77
UBE2D3-210ENST00000453744 KLLNB2CW77 178 aa10.26□□□□□ -0.77
UBE2D3-210ENST00000453744 EDA2RQ9HAV5 297 aa10.26□□□□□ -0.77
UBE2D3-210ENST00000453744 CDKN2A-AS1Q9UH64 79 aa10.26□□□□□ -0.77
UBE2D3-210ENST00000453744 A0A0J9YX75 114 aa10.26□□□□□ -0.77
UBE2D3-210ENST00000453744 UBE2L6O14933 153 aa10.26□□□□□ -0.77
UBE2D3-210ENST00000453744 GNLYP22749 145 aa10.26□□□□□ -0.77
UBE2D3-210ENST00000453744 XCL2Q9UBD3 114 aa10.26□□□□□ -0.77
UBE2D3-210ENST00000453744 TRGV1A0A0A0MS02 117 aa10.25□□□□□ -0.77
UBE2D3-210ENST00000453744 IGHV4-59P01825 116 aa10.25□□□□□ -0.77
UBE2D3-210ENST00000453744 SOCS3O14543 225 aa10.25□□□□□ -0.77
UBE2D3-210ENST00000453744 FBXL19-AS1Q494R0 122 aa10.25□□□□□ -0.77
UBE2D3-210ENST00000453744 C11orf68Q9H3H3 251 aaKnown RBP10.25□□□□□ -0.77
UBE2D3-210ENST00000453744 TRBV30A0A0K0K1B3 111 aa10.25□□□□□ -0.77
UBE2D3-210ENST00000453744 IGHG2P01859 326 aa10.25□□□□□ -0.77
UBE2D3-210ENST00000453744 MIAQ16674 131 aa10.24□□□□□ -0.77
UBE2D3-210ENST00000453744 NSUN5P1Q3KNT7 163 aa10.24□□□□□ -0.77
UBE2D3-210ENST00000453744 SVEP1Q4LDE5 3571 aa10.24□□□□□ -0.77
UBE2D3-210ENST00000453744 H3BT86 120 aa10.24□□□□□ -0.77
UBE2D3-210ENST00000453744 PRB1P04280 392 aa10.24□□□□□ -0.77
UBE2D3-210ENST00000453744 HIST2H2BDQ6DRA6 164 aa10.24□□□□□ -0.77
UBE2D3-210ENST00000453744 TRBV6-5A0A0K0K1A5 114 aa10.24□□□□□ -0.77
UBE2D3-210ENST00000453744 BAALC-AS2P0C853 105 aa10.24□□□□□ -0.77
UBE2D3-210ENST00000453744 ZNF415Q09FC8 603 aa10.24□□□□□ -0.77
UBE2D3-210ENST00000453744 POM121L12Q8N7R1 296 aa10.24□□□□□ -0.77
UBE2D3-210ENST00000453744 LINC00158P58513 81 aa10.23□□□□□ -0.77
UBE2D3-210ENST00000453744 RPL32P62910 135 aaKnown RBP10.23□□□□□ -0.77
UBE2D3-210ENST00000453744 SVIPQ8NHG7 77 aa10.23□□□□□ -0.77
UBE2D3-210ENST00000453744 Q9HAA7 133 aa10.23□□□□□ -0.77
UBE2D3-210ENST00000453744 APRG1Q8IVJ8 170 aa10.22□□□□□ -0.77
UBE2D3-210ENST00000453744 ODF3Q96PU9 254 aa10.22□□□□□ -0.77
UBE2D3-210ENST00000453744 LINC00467Q9BRT7 94 aa10.22□□□□□ -0.77
UBE2D3-210ENST00000453744 Q9UF83 564 aa10.22□□□□□ -0.77
UBE2D3-210ENST00000453744 COL12A1Q99715 3063 aa10.22□□□□□ -0.77
UBE2D3-210ENST00000453744 DCANP1Q8TF63 244 aa10.22□□□□□ -0.77
UBE2D3-210ENST00000453744 VSIG2Q96IQ7 327 aa10.22□□□□□ -0.77
UBE2D3-210ENST00000453744 CITED1Q99966 193 aa10.22□□□□□ -0.77
UBE2D3-210ENST00000453744 CFHR3Q02985 330 aa10.22□□□□□ -0.77
UBE2D3-210ENST00000453744 NXPH4O95158 308 aa10.21□□□□□ -0.77
UBE2D3-210ENST00000453744 A0A1W2PRX2 142 aa10.21□□□□□ -0.78
UBE2D3-210ENST00000453744 MRPL23Q16540 153 aaKnown RBP10.21□□□□□ -0.78
UBE2D3-210ENST00000453744 CRPP02741 224 aa10.2□□□□□ -0.78
UBE2D3-210ENST00000453744 MSMBP08118 114 aa10.2□□□□□ -0.78
UBE2D3-210ENST00000453744 SBSPONQ8IVN8 264 aa10.2□□□□□ -0.78
UBE2D3-210ENST00000453744 TMEM61Q8N0U2 210 aa10.2□□□□□ -0.78
UBE2D3-210ENST00000453744 AMELXQ99217 191 aa10.2□□□□□ -0.78
UBE2D3-210ENST00000453744 C9orf85Q96MD7 179 aa10.2□□□□□ -0.78
UBE2D3-210ENST00000453744 NHLRC4P0CG21 123 aaPredicted RBP10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms