RNA–Protein interactions for RNA: ENST00000452182.1

SCN9A-204, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

TSL 1 (best)

Gene SCN9A, Length 1,618 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-204ENST00000452182 LINC00476Q8WZB0 136 aa7.96□□□□□ -1.14
SCN9A-204ENST00000452182 TRBV6-8A0A0A6YYG3 113 aa7.95□□□□□ -1.14
SCN9A-204ENST00000452182 IGHV3-38A0A0C4DH36 116 aa7.95□□□□□ -1.14
SCN9A-204ENST00000452182 I3L3M4 83 aa7.95□□□□□ -1.14
SCN9A-204ENST00000452182 KIAA1644Q3SXP7 199 aa7.95□□□□□ -1.14
SCN9A-204ENST00000452182 UBE2DNLQ8IWF7 75 aa7.95□□□□□ -1.14
SCN9A-204ENST00000452182 VPS13DQ5THJ4 4388 aa7.94□□□□□ -1.14
SCN9A-204ENST00000452182 RAB5AP20339 215 aa7.94□□□□□ -1.14
SCN9A-204ENST00000452182 COTL1Q14019 142 aa7.94□□□□□ -1.14
SCN9A-204ENST00000452182 NTM-AS1Q6ZSK4 140 aa7.94□□□□□ -1.14
SCN9A-204ENST00000452182 ALKBH7Q9BT30 221 aaPredicted RBP7.94□□□□□ -1.14
SCN9A-204ENST00000452182 ALMS1Q8TCU4 4167 aa7.94□□□□□ -1.14
SCN9A-204ENST00000452182 TRAV8-6A0A0B4J262 113 aa7.93□□□□□ -1.14
SCN9A-204ENST00000452182 PMCHP20382 165 aa7.93□□□□□ -1.14
SCN9A-204ENST00000452182 IQCJQ1A5X6 159 aa7.93□□□□□ -1.14
SCN9A-204ENST00000452182 SMIM2Q9BVW6 85 aa7.93□□□□□ -1.14
SCN9A-204ENST00000452182 TRBV25-1A0A075B6N4 114 aa7.92□□□□□ -1.14
SCN9A-204ENST00000452182 TCAPO15273 167 aa7.92□□□□□ -1.14
SCN9A-204ENST00000452182 KIR2DL4Q99706 377 aa7.92□□□□□ -1.14
SCN9A-204ENST00000452182 MAP1LC3AQ9H492 121 aa7.92□□□□□ -1.14
SCN9A-204ENST00000452182 DNAH1Q9P2D7 4330 aa7.92□□□□□ -1.14
SCN9A-204ENST00000452182 IGLV2-18A0A075B6J9 118 aa7.92□□□□□ -1.14
SCN9A-204ENST00000452182 IGHV1-24A0A0C4DH33 117 aa7.92□□□□□ -1.14
SCN9A-204ENST00000452182 LCE6AA0A183 80 aa7.92□□□□□ -1.14
SCN9A-204ENST00000452182 LY6G6CO95867 125 aa7.92□□□□□ -1.14
SCN9A-204ENST00000452182 TSHBP01222 138 aa7.92□□□□□ -1.14
SCN9A-204ENST00000452182 Q9H8V8 135 aa7.92□□□□□ -1.14
SCN9A-204ENST00000452182 K7EMI3 77 aa7.91□□□□□ -1.14
SCN9A-204ENST00000452182 WFDC10BQ8IUB3 73 aa7.91□□□□□ -1.14
SCN9A-204ENST00000452182 NXT2Q9NPJ8 142 aaKnown RBP7.91□□□□□ -1.14
SCN9A-204ENST00000452182 K7EP13 123 aa7.9□□□□□ -1.14
SCN9A-204ENST00000452182 SIVA1O15304 175 aa7.9□□□□□ -1.14
SCN9A-204ENST00000452182 TRGC2P03986 189 aa7.9□□□□□ -1.14
SCN9A-204ENST00000452182 DNAH10OSP0CZ25 163 aa7.9□□□□□ -1.14
SCN9A-204ENST00000452182 ESDP10768 282 aa7.9□□□□□ -1.14
SCN9A-204ENST00000452182 PKIAP61925 76 aa7.9□□□□□ -1.14
SCN9A-204ENST00000452182 Q8N8P6 123 aa7.9□□□□□ -1.14
SCN9A-204ENST00000452182 H7C423 109 aa7.89□□□□□ -1.15
SCN9A-204ENST00000452182 FCER1GP30273 86 aa7.89□□□□□ -1.15
SCN9A-204ENST00000452182 AMTP48728 403 aa7.89□□□□□ -1.15
SCN9A-204ENST00000452182 LINC01556Q5JQF7 62 aa7.89□□□□□ -1.15
SCN9A-204ENST00000452182 NIT1Q86X76 327 aa7.89□□□□□ -1.15
SCN9A-204ENST00000452182 TMEM243Q9BU79 118 aa7.89□□□□□ -1.15
SCN9A-204ENST00000452182 CHCHD7Q9BUK0 85 aa7.89□□□□□ -1.15
SCN9A-204ENST00000452182 LOC389332A0A1B0GUA5 103 aa7.89□□□□□ -1.15
SCN9A-204ENST00000452182 C18orf32Q8TCD1 76 aa7.89□□□□□ -1.15
SCN9A-204ENST00000452182 CHCHD5Q9BSY4 110 aa7.89□□□□□ -1.15
SCN9A-204ENST00000452182 KMT2CQ8NEZ4 4911 aaKnown RBP7.88□□□□□ -1.15
SCN9A-204ENST00000452182 IFI27P40305 119 aaPredicted RBP7.88□□□□□ -1.15
SCN9A-204ENST00000452182 DEFB104AQ8WTQ1 72 aa7.88□□□□□ -1.15
SCN9A-204ENST00000452182 SACSQ9NZJ4 4579 aa7.88□□□□□ -1.15
SCN9A-204ENST00000452182 KMT2AQ03164 3969 aa7.87□□□□□ -1.15
SCN9A-204ENST00000452182 LINC01546A6NGU7 62 aa7.87□□□□□ -1.15
SCN9A-204ENST00000452182 PRSS3P2Q8NHM4 247 aa7.87□□□□□ -1.15
SCN9A-204ENST00000452182 DNAH6Q9C0G6 4158 aa7.87□□□□□ -1.15
SCN9A-204ENST00000452182 HYDINQ4G0P3 5121 aa7.87□□□□□ -1.15
SCN9A-204ENST00000452182 TRAV9-2A0A087WT02 112 aa7.86□□□□□ -1.15
SCN9A-204ENST00000452182 A0A087WX48 190 aa7.86□□□□□ -1.15
SCN9A-204ENST00000452182 A0A1B0GUV1 79 aa7.86□□□□□ -1.15
SCN9A-204ENST00000452182 UBE2L6O14933 153 aa7.86□□□□□ -1.15
SCN9A-204ENST00000452182 ORMDL2Q53FV1 153 aa7.86□□□□□ -1.15
SCN9A-204ENST00000452182 TTC32Q5I0X7 151 aa7.86□□□□□ -1.15
SCN9A-204ENST00000452182 C20orf203Q8NBC4 194 aa7.86□□□□□ -1.15
SCN9A-204ENST00000452182 NBDYA0A0U1RRE5 68 aa7.85□□□□□ -1.15
SCN9A-204ENST00000452182 TMEM262E9PQX1 116 aa7.85□□□□□ -1.15
SCN9A-204ENST00000452182 LAGE3Q14657 143 aa7.85□□□□□ -1.15
SCN9A-204ENST00000452182 C10orf126Q8N4M7 172 aa7.85□□□□□ -1.15
SCN9A-204ENST00000452182 TMEM18Q96B42 140 aa7.85□□□□□ -1.15
SCN9A-204ENST00000452182 ZNF25P17030 456 aaPredicted RBP7.85□□□□□ -1.15
SCN9A-204ENST00000452182 G0S2P27469 103 aa7.85□□□□□ -1.15
SCN9A-204ENST00000452182 RAB5BP61020 215 aa7.85□□□□□ -1.15
SCN9A-204ENST00000452182 SMAGPQ0VAQ4 97 aa7.85□□□□□ -1.15
SCN9A-204ENST00000452182 Q0VG73 95 aa7.85□□□□□ -1.15
SCN9A-204ENST00000452182 GAGE6Q13070 117 aa7.85□□□□□ -1.15
SCN9A-204ENST00000452182 MPV17L2Q567V2 206 aa7.85□□□□□ -1.15
SCN9A-204ENST00000452182 Q6ZR54 194 aa7.85□□□□□ -1.15
SCN9A-204ENST00000452182 MRPL52Q86TS9 123 aaKnown RBP7.85□□□□□ -1.15
SCN9A-204ENST00000452182 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.84□□□□□ -1.15
SCN9A-204ENST00000452182 IGKV2-29A2NJV5 120 aaPredicted RBP7.84□□□□□ -1.15
SCN9A-204ENST00000452182 LINC00614P0C842 121 aa7.84□□□□□ -1.15
SCN9A-204ENST00000452182 FGF6P10767 208 aa7.84□□□□□ -1.15
SCN9A-204ENST00000452182 BTF3P20290 206 aaKnown RBP7.84□□□□□ -1.15
SCN9A-204ENST00000452182 RBX1P62877 108 aa7.84□□□□□ -1.15
SCN9A-204ENST00000452182 FA2HQ7L5A8 372 aa7.84□□□□□ -1.15
SCN9A-204ENST00000452182 TIMM21Q9BVV7 248 aa7.84□□□□□ -1.15
SCN9A-204ENST00000452182 CSDC2Q9Y534 153 aaKnown RBP7.84□□□□□ -1.15
SCN9A-204ENST00000452182 IGHV3-30P01768 117 aa7.83□□□□□ -1.16
SCN9A-204ENST00000452182 IGHV3-33P01772 117 aa7.83□□□□□ -1.16
SCN9A-204ENST00000452182 IGHV3-30-3P0DP02 117 aa7.83□□□□□ -1.16
SCN9A-204ENST00000452182 IGHV3-30-5P0DP03 117 aa7.83□□□□□ -1.16
SCN9A-204ENST00000452182 Q8N3U1 123 aa7.83□□□□□ -1.16
SCN9A-204ENST00000452182 Q8N976 141 aa7.83□□□□□ -1.16
SCN9A-204ENST00000452182 URB1-AS1Q96HZ7 61 aa7.83□□□□□ -1.16
SCN9A-204ENST00000452182 KRTAP1-5Q9BYS1 174 aa7.83□□□□□ -1.16
SCN9A-204ENST00000452182 CDIP1Q9H305 208 aa7.83□□□□□ -1.16
SCN9A-204ENST00000452182 UBE2D4Q9Y2X8 147 aa7.83□□□□□ -1.16
SCN9A-204ENST00000452182 LINC01549A6NIU2 74 aa7.82□□□□□ -1.16
SCN9A-204ENST00000452182 IBA57-AS1B1ANH7 110 aa7.82□□□□□ -1.16
SCN9A-204ENST00000452182 AMMECR1LQ6DCA0 310 aa7.82□□□□□ -1.16
SCN9A-204ENST00000452182 CHCHD1Q96BP2 118 aaKnown RBP7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms