RNA–Protein interactions for RNA: ENST00000450303.6

PRPF40A-204, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 3

Gene PRPF40A, Length 496 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-204ENST00000450303 LINC00588Q9Y4M8 146 aa11.84□□□□□ -0.51
PRPF40A-204ENST00000450303 HECTD4Q9Y4D8 3996 aa11.84□□□□□ -0.51
PRPF40A-204ENST00000450303 IGHV3-73A0A0B4J1V6 119 aa11.83□□□□□ -0.52
PRPF40A-204ENST00000450303 IGHV1-24A0A0C4DH33 117 aa11.83□□□□□ -0.52
PRPF40A-204ENST00000450303 A0A1B0GVY2 172 aa11.83□□□□□ -0.52
PRPF40A-204ENST00000450303 CCL18P55774 89 aa11.83□□□□□ -0.52
PRPF40A-204ENST00000450303 MAP1LC3CQ9BXW4 147 aa11.83□□□□□ -0.52
PRPF40A-204ENST00000450303 KIF25-AS1Q9Y6Z4 181 aa11.83□□□□□ -0.52
PRPF40A-204ENST00000450303 FAT2Q9NYQ8 4349 aa11.82□□□□□ -0.52
PRPF40A-204ENST00000450303 FHL2Q14192 279 aa11.82□□□□□ -0.52
PRPF40A-204ENST00000450303 UFSP1Q6NVU6 142 aa11.82□□□□□ -0.52
PRPF40A-204ENST00000450303 ZNRF2Q8NHG8 242 aa11.82□□□□□ -0.52
PRPF40A-204ENST00000450303 URB1-AS1Q96HZ7 61 aa11.82□□□□□ -0.52
PRPF40A-204ENST00000450303 H7C1H1 209 aa11.81□□□□□ -0.52
PRPF40A-204ENST00000450303 PRADC1Q9BSG0 188 aa11.81□□□□□ -0.52
PRPF40A-204ENST00000450303 PRO0255Q9UI72 69 aa11.81□□□□□ -0.52
PRPF40A-204ENST00000450303 HHLA3Q9XRX5 114 aa11.81□□□□□ -0.52
PRPF40A-204ENST00000450303 TRBV6-4A0A1B0GX49 114 aa11.8□□□□□ -0.52
PRPF40A-204ENST00000450303 GATA1P15976 413 aaPredicted RBP11.8□□□□□ -0.52
PRPF40A-204ENST00000450303 C1orf134Q5TEV5 83 aa11.8□□□□□ -0.52
PRPF40A-204ENST00000450303 PET117Q6UWS5 81 aa11.8□□□□□ -0.52
PRPF40A-204ENST00000450303 NXT2Q9NPJ8 142 aaKnown RBP11.8□□□□□ -0.52
PRPF40A-204ENST00000450303 PAM16Q9Y3D7 125 aa11.8□□□□□ -0.52
PRPF40A-204ENST00000450303 LOC389332A0A1B0GUA5 103 aa11.79□□□□□ -0.52
PRPF40A-204ENST00000450303 LINC00315P59091 139 aa11.79□□□□□ -0.52
PRPF40A-204ENST00000450303 RHOHQ15669 191 aa11.79□□□□□ -0.52
PRPF40A-204ENST00000450303 Q8N976 141 aa11.79□□□□□ -0.52
PRPF40A-204ENST00000450303 MRAP2Q96G30 205 aa11.79□□□□□ -0.52
PRPF40A-204ENST00000450303 NBDYA0A0U1RRE5 68 aa11.78□□□□□ -0.52
PRPF40A-204ENST00000450303 K7EQD1 137 aa11.78□□□□□ -0.52
PRPF40A-204ENST00000450303 PAX4O43316 350 aa11.78□□□□□ -0.52
PRPF40A-204ENST00000450303 IFI27P40305 119 aaPredicted RBP11.78□□□□□ -0.52
PRPF40A-204ENST00000450303 CRYBA4P53673 196 aa11.78□□□□□ -0.52
PRPF40A-204ENST00000450303 SPATA45Q537H7 98 aa11.78□□□□□ -0.52
PRPF40A-204ENST00000450303 RNF185Q96GF1 192 aa11.78□□□□□ -0.52
PRPF40A-204ENST00000450303 VSIG2Q96IQ7 327 aa11.78□□□□□ -0.52
PRPF40A-204ENST00000450303 TRBV10-1A0A0K0K1A3 114 aa11.77□□□□□ -0.53
PRPF40A-204ENST00000450303 HSBP1L1C9JCN9 74 aa11.77□□□□□ -0.53
PRPF40A-204ENST00000450303 SYS1-DBNDD2H3BUS1 97 aa11.77□□□□□ -0.53
PRPF40A-204ENST00000450303 PPP1R17O96001 155 aa11.77□□□□□ -0.53
PRPF40A-204ENST00000450303 NPYP01303 97 aa11.77□□□□□ -0.53
PRPF40A-204ENST00000450303 CTAG1AP78358 180 aa11.77□□□□□ -0.53
PRPF40A-204ENST00000450303 ESRGQ1W209 222 aa11.77□□□□□ -0.53
PRPF40A-204ENST00000450303 SUMO4Q6EEV6 95 aa11.77□□□□□ -0.53
PRPF40A-204ENST00000450303 SLC25A29Q8N8R3 303 aa11.77□□□□□ -0.53
PRPF40A-204ENST00000450303 MIEN1Q9BRT3 115 aa11.77□□□□□ -0.53
PRPF40A-204ENST00000450303 TRAV9-2A0A087WT02 112 aa11.76□□□□□ -0.53
PRPF40A-204ENST00000450303 H3BNG1 76 aa11.76□□□□□ -0.53
PRPF40A-204ENST00000450303 TNFRSF6BO95407 300 aa11.76□□□□□ -0.53
PRPF40A-204ENST00000450303 HBDP02042 147 aa11.76□□□□□ -0.53
PRPF40A-204ENST00000450303 LBHQ53QV2 105 aaPredicted RBP11.76□□□□□ -0.53
PRPF40A-204ENST00000450303 MRPL52Q86TS9 123 aaKnown RBP11.76□□□□□ -0.53
PRPF40A-204ENST00000450303 Q9H8V8 135 aa11.76□□□□□ -0.53
PRPF40A-204ENST00000450303 SMKR1H3BMG3 65 aa11.75□□□□□ -0.53
PRPF40A-204ENST00000450303 NCR2O95944 276 aa11.75□□□□□ -0.53
PRPF40A-204ENST00000450303 RPL36AP83881 106 aaKnown RBP11.75□□□□□ -0.53
PRPF40A-204ENST00000450303 Q6ZSN1 163 aa11.75□□□□□ -0.53
PRPF40A-204ENST00000450303 RPL36ALQ969Q0 106 aaKnown RBP11.75□□□□□ -0.53
PRPF40A-204ENST00000450303 C14orf144Q96I85 54 aa11.75□□□□□ -0.53
PRPF40A-204ENST00000450303 DNAJC30Q96LL9 226 aa11.75□□□□□ -0.53
PRPF40A-204ENST00000450303 PKD1P98161 4303 aa11.75□□□□□ -0.53
PRPF40A-204ENST00000450303 HERC2O95714 4834 aa11.74□□□□□ -0.53
PRPF40A-204ENST00000450303 A0A096LPF7 62 aa11.74□□□□□ -0.53
PRPF40A-204ENST00000450303 M0QY20 66 aa11.74□□□□□ -0.53
PRPF40A-204ENST00000450303 Q8N8P6 123 aa11.74□□□□□ -0.53
PRPF40A-204ENST00000450303 UQCR10Q9UDW1 63 aa11.74□□□□□ -0.53
PRPF40A-204ENST00000450303 TNFRSF18Q9Y5U5 241 aa11.74□□□□□ -0.53
PRPF40A-204ENST00000450303 KIAA1109Q2LD37 5005 aa11.73□□□□□ -0.53
PRPF40A-204ENST00000450303 TRAV26-2A0A0B4J265 109 aa11.73□□□□□ -0.53
PRPF40A-204ENST00000450303 GYPEP15421 78 aa11.73□□□□□ -0.53
PRPF40A-204ENST00000450303 TNP2Q05952 138 aa11.73□□□□□ -0.53
PRPF40A-204ENST00000450303 C6orf223Q8N319 242 aa11.73□□□□□ -0.53
PRPF40A-204ENST00000450303 ICOSQ9Y6W8 199 aa11.73□□□□□ -0.53
PRPF40A-204ENST00000450303 MRPL23Q16540 153 aaKnown RBP11.72□□□□□ -0.53
PRPF40A-204ENST00000450303 SH2D6Q7Z4S9 175 aa11.72□□□□□ -0.53
PRPF40A-204ENST00000450303 SPATA12Q7Z6I5 190 aa11.72□□□□□ -0.53
PRPF40A-204ENST00000450303 TRBV7-3A0A075B6L6 115 aa11.71□□□□□ -0.53
PRPF40A-204ENST00000450303 LINC01546A6NGU7 62 aa11.71□□□□□ -0.53
PRPF40A-204ENST00000450303 PRSS47A8MTI9 375 aa11.71□□□□□ -0.53
PRPF40A-204ENST00000450303 NEXN-AS1Q8NBZ9 246 aa11.71□□□□□ -0.53
PRPF40A-204ENST00000450303 KRTAP1-5Q9BYS1 174 aa11.71□□□□□ -0.53
PRPF40A-204ENST00000450303 MRPS16Q9Y3D3 137 aaKnown RBP11.71□□□□□ -0.53
PRPF40A-204ENST00000450303 GAGE12JA6NER3 117 aa11.7□□□□□ -0.54
PRPF40A-204ENST00000450303 M0R143 59 aa11.7□□□□□ -0.54
PRPF40A-204ENST00000450303 FCER1GP30273 86 aa11.7□□□□□ -0.54
PRPF40A-204ENST00000450303 GAGE1Q13065 139 aa11.7□□□□□ -0.54
PRPF40A-204ENST00000450303 GAGE4Q13068 117 aa11.7□□□□□ -0.54
PRPF40A-204ENST00000450303 GAGE5Q13069 117 aa11.7□□□□□ -0.54
PRPF40A-204ENST00000450303 GAGE13Q4V321 117 aa11.7□□□□□ -0.54
PRPF40A-204ENST00000450303 ST20Q9HBF5 79 aa11.7□□□□□ -0.54
PRPF40A-204ENST00000450303 DYNC1H1Q14204 4646 aaKnown RBP11.69□□□□□ -0.54
PRPF40A-204ENST00000450303 TRBV6-5A0A0K0K1A5 114 aa11.69□□□□□ -0.54
PRPF40A-204ENST00000450303 LINC01545Q5VT33 79 aa11.69□□□□□ -0.54
PRPF40A-204ENST00000450303 LINC00173Q6ZV60 143 aa11.69□□□□□ -0.54
PRPF40A-204ENST00000450303 ATOH7Q8N100 152 aa11.69□□□□□ -0.54
PRPF40A-204ENST00000450303 IFI27L1Q96BM0 104 aa11.69□□□□□ -0.54
PRPF40A-204ENST00000450303 C20orf78Q9BR46 151 aa11.69□□□□□ -0.54
PRPF40A-204ENST00000450303 UPK3BQ9BT76 320 aa11.69□□□□□ -0.54
PRPF40A-204ENST00000450303 PKHD1P08F94 4074 aa11.69□□□□□ -0.54
PRPF40A-204ENST00000450303 LOC100131303A0A0U1RQF7 123 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 112.1 ms