RNA–Protein interactions for RNA: ENST00000450066.6

USP39-207, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2 BASIC

Gene USP39, Length 2,086 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-207ENST00000450066 DEFB4AO15263 64 aa10.1□□□□□ -0.79
USP39-207ENST00000450066 ODF1Q14990 250 aa10.1□□□□□ -0.79
USP39-207ENST00000450066 MAJINQ3KP22 176 aa10.09□□□□□ -0.79
USP39-207ENST00000450066 SPATA45Q537H7 98 aa10.09□□□□□ -0.79
USP39-207ENST00000450066 TMEM141Q96I45 108 aa10.09□□□□□ -0.79
USP39-207ENST00000450066 TIMM17AQ99595 171 aa10.09□□□□□ -0.79
USP39-207ENST00000450066 TRAV12-1A0A0B4J245 112 aa10.08□□□□□ -0.8
USP39-207ENST00000450066 UBE2D3P61077 147 aa10.08□□□□□ -0.8
USP39-207ENST00000450066 UBE2D2P62837 147 aa10.08□□□□□ -0.8
USP39-207ENST00000450066 COTL1Q14019 142 aa10.08□□□□□ -0.8
USP39-207ENST00000450066 DAZ4Q86SG3 579 aaKnown RBP10.08□□□□□ -0.8
USP39-207ENST00000450066 DAZ3Q9NR90 486 aaKnown RBP10.08□□□□□ -0.8
USP39-207ENST00000450066 PHLDA1Q8WV24 401 aaPredicted RBP10.08□□□□□ -0.8
USP39-207ENST00000450066 PRADC1Q9BSG0 188 aa10.08□□□□□ -0.8
USP39-207ENST00000450066 MGAM2Q2M2H8 2515 aa10.07□□□□□ -0.8
USP39-207ENST00000450066 A0A087WX48 190 aa10.07□□□□□ -0.8
USP39-207ENST00000450066 IGHV3-38A0A0C4DH36 116 aa10.07□□□□□ -0.8
USP39-207ENST00000450066 BAALCQ8WXS3 180 aa10.07□□□□□ -0.8
USP39-207ENST00000450066 HHLA3Q9XRX5 114 aa10.07□□□□□ -0.8
USP39-207ENST00000450066 GAGE12JA6NER3 117 aa10.06□□□□□ -0.8
USP39-207ENST00000450066 HSBP1L1C9JCN9 74 aa10.06□□□□□ -0.8
USP39-207ENST00000450066 SPART-AS1P0CW21 52 aa10.06□□□□□ -0.8
USP39-207ENST00000450066 GAGE1Q13065 139 aa10.06□□□□□ -0.8
USP39-207ENST00000450066 GAGE4Q13068 117 aa10.06□□□□□ -0.8
USP39-207ENST00000450066 GAGE5Q13069 117 aa10.06□□□□□ -0.8
USP39-207ENST00000450066 GAGE13Q4V321 117 aa10.06□□□□□ -0.8
USP39-207ENST00000450066 hDV102S1A0JD36 115 aa10.06□□□□□ -0.8
USP39-207ENST00000450066 KPRPQ5T749 579 aaPredicted RBP10.06□□□□□ -0.8
USP39-207ENST00000450066 CHCHD7Q9BUK0 85 aa10.06□□□□□ -0.8
USP39-207ENST00000450066 DDTP30046 118 aa10.05□□□□□ -0.8
USP39-207ENST00000450066 DAD1P61803 113 aa10.05□□□□□ -0.8
USP39-207ENST00000450066 PYGO1Q9Y3Y4 419 aa10.05□□□□□ -0.8
USP39-207ENST00000450066 LOC100131303A0A0U1RQF7 123 aa10.05□□□□□ -0.8
USP39-207ENST00000450066 DPM2O94777 84 aa10.05□□□□□ -0.8
USP39-207ENST00000450066 MRPL35Q9NZE8 188 aaKnown RBP10.05□□□□□ -0.8
USP39-207ENST00000450066 CELA1Q9UNI1 258 aa10.05□□□□□ -0.8
USP39-207ENST00000450066 TEX48A0A1B0GUV7 120 aa10.04□□□□□ -0.8
USP39-207ENST00000450066 PRSS29PA6NIE9 313 aa10.04□□□□□ -0.8
USP39-207ENST00000450066 IGKCP01834 107 aa10.04□□□□□ -0.8
USP39-207ENST00000450066 CRYBA4P53673 196 aa10.04□□□□□ -0.8
USP39-207ENST00000450066 RETNQ9HD89 108 aa10.04□□□□□ -0.8
USP39-207ENST00000450066 PRO0255Q9UI72 69 aa10.04□□□□□ -0.8
USP39-207ENST00000450066 F8VRH5 84 aa10.03□□□□□ -0.8
USP39-207ENST00000450066 LINC00694P0DN24 101 aa10.03□□□□□ -0.8
USP39-207ENST00000450066 PLNP26678 52 aa10.03□□□□□ -0.8
USP39-207ENST00000450066 PMVKQ15126 192 aa10.03□□□□□ -0.8
USP39-207ENST00000450066 GTSF1LQ9H1H1 148 aa10.03□□□□□ -0.8
USP39-207ENST00000450066 CHTOPQ9Y3Y2 248 aaKnown RBP10.03□□□□□ -0.8
USP39-207ENST00000450066 NPSP0C0P6 89 aa10.03□□□□□ -0.8
USP39-207ENST00000450066 IGLC3P0DOY3 106 aa10.03□□□□□ -0.8
USP39-207ENST00000450066 MIEN1Q9BRT3 115 aa10.03□□□□□ -0.8
USP39-207ENST00000450066 LINC00587B1AMM8 73 aa10.02□□□□□ -0.81
USP39-207ENST00000450066 ATP5G1P05496 136 aa10.02□□□□□ -0.81
USP39-207ENST00000450066 CST9LQ9H4G1 147 aa10.02□□□□□ -0.81
USP39-207ENST00000450066 SPANXA1Q9NS26 97 aa10.02□□□□□ -0.81
USP39-207ENST00000450066 PRB2P02812 416 aaPredicted RBP10.02□□□□□ -0.81
USP39-207ENST00000450066 PAPPA-AS1Q5QFB9 102 aa10.02□□□□□ -0.81
USP39-207ENST00000450066 NTM-AS1Q6ZSK4 140 aa10.02□□□□□ -0.81
USP39-207ENST00000450066 IGLV4-3A0A075B6K6 122 aa10.01□□□□□ -0.81
USP39-207ENST00000450066 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.01□□□□□ -0.81
USP39-207ENST00000450066 IGKV2-29A2NJV5 120 aaPredicted RBP10.01□□□□□ -0.81
USP39-207ENST00000450066 K7EIL1 84 aa10.01□□□□□ -0.81
USP39-207ENST00000450066 STPG4Q8N801 248 aa10.01□□□□□ -0.81
USP39-207ENST00000450066 C11orf68Q9H3H3 251 aaKnown RBP10.01□□□□□ -0.81
USP39-207ENST00000450066 UBE2D4Q9Y2X8 147 aa10.01□□□□□ -0.81
USP39-207ENST00000450066 GYPEP15421 78 aa10□□□□□ -0.81
USP39-207ENST00000450066 OPRPNQ99935 248 aaPredicted RBP10□□□□□ -0.81
USP39-207ENST00000450066 UQCR10Q9UDW1 63 aa10□□□□□ -0.81
USP39-207ENST00000450066 PAX4O43316 350 aa10□□□□□ -0.81
USP39-207ENST00000450066 SBSPONQ8IVN8 264 aa10□□□□□ -0.81
USP39-207ENST00000450066 FAM104AQ969W3 186 aa10□□□□□ -0.81
USP39-207ENST00000450066 C14orf144Q96I85 54 aa10□□□□□ -0.81
USP39-207ENST00000450066 TIMM21Q9BVV7 248 aa10□□□□□ -0.81
USP39-207ENST00000450066 ANKRD39Q53RE8 183 aa9.99□□□□□ -0.81
USP39-207ENST00000450066 ZC2HC1BQ5TFG8 222 aa9.99□□□□□ -0.81
USP39-207ENST00000450066 VCX2Q9H322 139 aa9.99□□□□□ -0.81
USP39-207ENST00000450066 TMEM97Q5BJF2 176 aa9.98□□□□□ -0.81
USP39-207ENST00000450066 CEMP1Q6PRD7 247 aaPredicted RBP9.98□□□□□ -0.81
USP39-207ENST00000450066 LURAP1LQ8IV03 231 aa9.98□□□□□ -0.81
USP39-207ENST00000450066 TENM3Q9P273 2699 aa9.98□□□□□ -0.81
USP39-207ENST00000450066 VSIG2Q96IQ7 327 aa9.98□□□□□ -0.81
USP39-207ENST00000450066 AMELXQ99217 191 aa9.98□□□□□ -0.81
USP39-207ENST00000450066 IGLV4-69A0A075B6H9 119 aa9.97□□□□□ -0.81
USP39-207ENST00000450066 TRBV25-1A0A075B6N4 114 aa9.97□□□□□ -0.81
USP39-207ENST00000450066 C12orf74Q32Q52 190 aa9.97□□□□□ -0.81
USP39-207ENST00000450066 DEFB121Q5J5C9 76 aa9.97□□□□□ -0.81
USP39-207ENST00000450066 MRPL52Q86TS9 123 aaKnown RBP9.97□□□□□ -0.81
USP39-207ENST00000450066 ATP6V0E2Q8NHE4 81 aa9.97□□□□□ -0.81
USP39-207ENST00000450066 TMEM243Q9BU79 118 aa9.97□□□□□ -0.81
USP39-207ENST00000450066 TRBV6-8A0A0A6YYG3 113 aa9.97□□□□□ -0.81
USP39-207ENST00000450066 F5H768 121 aa9.97□□□□□ -0.81
USP39-207ENST00000450066 MRPS36P82909 103 aaKnown RBP9.97□□□□□ -0.81
USP39-207ENST00000450066 SMAGPQ0VAQ4 97 aa9.97□□□□□ -0.81
USP39-207ENST00000450066 SPATA25Q9BR10 227 aa9.97□□□□□ -0.81
USP39-207ENST00000450066 CSDC2Q9Y534 153 aaKnown RBP9.97□□□□□ -0.81
USP39-207ENST00000450066 H7C423 109 aa9.96□□□□□ -0.81
USP39-207ENST00000450066 TM2D3Q9BRN9 247 aa9.96□□□□□ -0.81
USP39-207ENST00000450066 TRAV26-1A0A087WT03 109 aa9.95□□□□□ -0.82
USP39-207ENST00000450066 COX8AP10176 69 aa9.95□□□□□ -0.82
USP39-207ENST00000450066 FGF6P10767 208 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms