RNA–Protein interactions for RNA: ENST00000449508.1

TOM1-211, Transcript of target of myb1 membrane trafficking protein, humanhuman

TSL 4

Gene TOM1, Length 593 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-211ENST00000449508 TWIST1Q15672 202 aa8.86□□□□□ -0.99
TOM1-211ENST00000449508 C9orf163Q8N9P6 203 aa8.86□□□□□ -0.99
TOM1-211ENST00000449508 C20orf203Q8NBC4 194 aa8.86□□□□□ -0.99
TOM1-211ENST00000449508 TRAV8-4A0A0B4J246 113 aa8.85□□□□□ -0.99
TOM1-211ENST00000449508 A0A1B0GUV1 79 aa8.85□□□□□ -0.99
TOM1-211ENST00000449508 NDUFS6O75380 124 aaKnown RBP8.85□□□□□ -0.99
TOM1-211ENST00000449508 CLRN3Q8NCR9 226 aa8.85□□□□□ -0.99
TOM1-211ENST00000449508 IGLV4-60A0A075B6I1 120 aa8.84□□□□□ -0.99
TOM1-211ENST00000449508 LINC00862A6NCI5 91 aa8.84□□□□□ -0.99
TOM1-211ENST00000449508 UBE2L6O14933 153 aa8.84□□□□□ -0.99
TOM1-211ENST00000449508 CTRLP40313 264 aa8.84□□□□□ -0.99
TOM1-211ENST00000449508 KRTAP10-4P60372 401 aaPredicted RBP8.84□□□□□ -0.99
TOM1-211ENST00000449508 COTL1Q14019 142 aa8.84□□□□□ -0.99
TOM1-211ENST00000449508 OCC1Q8TAD7 63 aa8.84□□□□□ -0.99
TOM1-211ENST00000449508 PGLYRP4Q96LB8 373 aa8.84□□□□□ -0.99
TOM1-211ENST00000449508 RNASE7Q9H1E1 156 aaKnown RBP8.84□□□□□ -0.99
TOM1-211ENST00000449508 K7EN84 100 aa8.83□□□□□ -1
TOM1-211ENST00000449508 AMTP48728 403 aa8.83□□□□□ -1
TOM1-211ENST00000449508 GFRA4Q9GZZ7 299 aa8.83□□□□□ -1
TOM1-211ENST00000449508 RPP21Q9H633 154 aaKnown RBP8.83□□□□□ -1
TOM1-211ENST00000449508 hDV102S1A0JD36 115 aa8.82□□□□□ -1
TOM1-211ENST00000449508 SDIM1Q6ZPB5 146 aa8.82□□□□□ -1
TOM1-211ENST00000449508 GATD1Q8NB37 220 aa8.82□□□□□ -1
TOM1-211ENST00000449508 CNFNQ9BYD5 112 aa8.82□□□□□ -1
TOM1-211ENST00000449508 TRAV26-2A0A0B4J265 109 aa8.81□□□□□ -1
TOM1-211ENST00000449508 RPL37AP61513 92 aaKnown RBP8.81□□□□□ -1
TOM1-211ENST00000449508 NDUFA5Q16718 116 aa8.81□□□□□ -1
TOM1-211ENST00000449508 SMIM15Q7Z3B0 74 aa8.81□□□□□ -1
TOM1-211ENST00000449508 SMDT1Q9H4I9 107 aa8.81□□□□□ -1
TOM1-211ENST00000449508 AP5S1Q9NUS5 200 aa8.81□□□□□ -1
TOM1-211ENST00000449508 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.81□□□□□ -1
TOM1-211ENST00000449508 LRP1Q07954 4544 aaKnown RBP8.81□□□□□ -1
TOM1-211ENST00000449508 GATCO43716 136 aaKnown RBP8.8□□□□□ -1
TOM1-211ENST00000449508 GTSF1Q8WW33 167 aa8.8□□□□□ -1
TOM1-211ENST00000449508 FAM210AQ96ND0 272 aa8.8□□□□□ -1
TOM1-211ENST00000449508 IGKV3OR2-268A0A0C4DH90 116 aa8.79□□□□□ -1
TOM1-211ENST00000449508 PANO1I0J062 215 aa8.79□□□□□ -1
TOM1-211ENST00000449508 OXTP01178 125 aa8.79□□□□□ -1
TOM1-211ENST00000449508 FOXA3P55318 350 aaPredicted RBP8.79□□□□□ -1
TOM1-211ENST00000449508 CNBPP62633 177 aaKnown RBP8.79□□□□□ -1
TOM1-211ENST00000449508 DPH3Q96FX2 82 aa8.79□□□□□ -1
TOM1-211ENST00000449508 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.78□□□□□ -1
TOM1-211ENST00000449508 TMEM250H0YL14 139 aa8.78□□□□□ -1
TOM1-211ENST00000449508 CEBPGP53567 150 aa8.78□□□□□ -1
TOM1-211ENST00000449508 AMMECR1LQ6DCA0 310 aa8.78□□□□□ -1
TOM1-211ENST00000449508 RPL39LQ96EH5 51 aaKnown RBP8.78□□□□□ -1
TOM1-211ENST00000449508 IGHV3-64A0A075B6Q5 118 aa8.77□□□□□ -1.01
TOM1-211ENST00000449508 GAGE12HA6NDE8 117 aa8.77□□□□□ -1.01
TOM1-211ENST00000449508 A8MWL6 223 aa8.77□□□□□ -1.01
TOM1-211ENST00000449508 NCR2O95944 276 aa8.77□□□□□ -1.01
TOM1-211ENST00000449508 SLPIP03973 132 aa8.77□□□□□ -1.01
TOM1-211ENST00000449508 RNASEKQ6P5S7 137 aaKnown RBP8.77□□□□□ -1.01
TOM1-211ENST00000449508 UQCC3Q6UW78 93 aa8.77□□□□□ -1.01
TOM1-211ENST00000449508 FAM231DQ6ZW35 169 aa8.77□□□□□ -1.01
TOM1-211ENST00000449508 FAT3Q8TDW7 4589 aa8.76□□□□□ -1.01
TOM1-211ENST00000449508 SDHAF1A6NFY7 115 aa8.76□□□□□ -1.01
TOM1-211ENST00000449508 CFAP161Q6P656 301 aa8.76□□□□□ -1.01
TOM1-211ENST00000449508 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.75□□□□□ -1.01
TOM1-211ENST00000449508 IGKV2-29A2NJV5 120 aaPredicted RBP8.75□□□□□ -1.01
TOM1-211ENST00000449508 H7C423 109 aa8.75□□□□□ -1.01
TOM1-211ENST00000449508 APCSP02743 223 aa8.75□□□□□ -1.01
TOM1-211ENST00000449508 PMCHP20382 165 aa8.75□□□□□ -1.01
TOM1-211ENST00000449508 SERTAD4-AS1Q5TG53 156 aa8.75□□□□□ -1.01
TOM1-211ENST00000449508 I3L3M4 83 aa8.74□□□□□ -1.01
TOM1-211ENST00000449508 FGF6P10767 208 aa8.74□□□□□ -1.01
TOM1-211ENST00000449508 HNRNPA3P51991 378 aaKnown RBP8.74□□□□□ -1.01
TOM1-211ENST00000449508 CIRBPQ14011 172 aaKnown RBP8.74□□□□□ -1.01
TOM1-211ENST00000449508 PEA15Q15121 130 aa8.74□□□□□ -1.01
TOM1-211ENST00000449508 COMMD7Q86VX2 200 aa8.74□□□□□ -1.01
TOM1-211ENST00000449508 C15orf56Q8N910 161 aa8.74□□□□□ -1.01
TOM1-211ENST00000449508 BORCS7Q96B45 105 aa8.74□□□□□ -1.01
TOM1-211ENST00000449508 EIF5A2Q9GZV4 153 aaKnown RBP8.74□□□□□ -1.01
TOM1-211ENST00000449508 PKHD1L1Q86WI1 4243 aa8.74□□□□□ -1.01
TOM1-211ENST00000449508 CHTF8P0CG12 524 aa8.73□□□□□ -1.01
TOM1-211ENST00000449508 CT83Q5H943 113 aa8.73□□□□□ -1.01
TOM1-211ENST00000449508 CHCHD10Q8WYQ3 142 aaPredicted RBP8.73□□□□□ -1.01
TOM1-211ENST00000449508 A0A087WYN8 130 aa8.72□□□□□ -1.01
TOM1-211ENST00000449508 TRBV6-5A0A0K0K1A5 114 aa8.72□□□□□ -1.01
TOM1-211ENST00000449508 FAM231BA6NCW3 169 aa8.72□□□□□ -1.01
TOM1-211ENST00000449508 RPS10P46783 165 aaKnown RBP8.72□□□□□ -1.01
TOM1-211ENST00000449508 HIGD2BQ4VC39 106 aa8.72□□□□□ -1.01
TOM1-211ENST00000449508 RNF185Q96GF1 192 aa8.72□□□□□ -1.01
TOM1-211ENST00000449508 BTF3L4Q96K17 158 aa8.72□□□□□ -1.01
TOM1-211ENST00000449508 SMIM7Q9BQ49 75 aa8.72□□□□□ -1.01
TOM1-211ENST00000449508 A0A1B0GUT8 65 aa8.71□□□□□ -1.02
TOM1-211ENST00000449508 GAS8-AS1O95177 125 aa8.71□□□□□ -1.02
TOM1-211ENST00000449508 SRP19P09132 144 aaKnown RBP8.71□□□□□ -1.02
TOM1-211ENST00000449508 ZNF25P17030 456 aaPredicted RBP8.71□□□□□ -1.02
TOM1-211ENST00000449508 COX6A2Q02221 97 aa8.71□□□□□ -1.02
TOM1-211ENST00000449508 OR5A1Q8NGJ0 315 aa8.71□□□□□ -1.02
TOM1-211ENST00000449508 SPACA4Q8TDM5 124 aa8.71□□□□□ -1.02
TOM1-211ENST00000449508 TMEM101Q96IK0 257 aa8.71□□□□□ -1.02
TOM1-211ENST00000449508 ST20Q9HBF5 79 aa8.71□□□□□ -1.02
TOM1-211ENST00000449508 ZNF727A8MUV8 499 aa8.7□□□□□ -1.02
TOM1-211ENST00000449508 HIGD1CA8MV81 97 aa8.7□□□□□ -1.02
TOM1-211ENST00000449508 SRSF3P84103 164 aaKnown RBP8.7□□□□□ -1.02
TOM1-211ENST00000449508 LINC01551Q86U37 167 aa8.7□□□□□ -1.02
TOM1-211ENST00000449508 TSKUQ8WUA8 353 aa8.7□□□□□ -1.02
TOM1-211ENST00000449508 TMEM191AQ9H0A3 160 aa8.7□□□□□ -1.02
TOM1-211ENST00000449508 C9JQL5 133 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms