RNA–Protein interactions for RNA: ENST00000449062.1

RTFDC1-204, Transcript of Protein RTF2 homolog, humanhuman

TSL 5

Gene RTFDC1, Length 852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-204ENST00000449062 GAS8-AS1O95177 125 aa9.22□□□□□ -0.93
RTFDC1-204ENST00000449062 ANGP03950 147 aaKnown RBP9.22□□□□□ -0.93
RTFDC1-204ENST00000449062 C20orf203Q8NBC4 194 aa9.22□□□□□ -0.93
RTFDC1-204ENST00000449062 DEFB104AQ8WTQ1 72 aa9.22□□□□□ -0.93
RTFDC1-204ENST00000449062 RPL39LQ96EH5 51 aaKnown RBP9.22□□□□□ -0.93
RTFDC1-204ENST00000449062 TMEM70Q9BUB7 260 aa9.22□□□□□ -0.93
RTFDC1-204ENST00000449062 A0A1B0GUT8 65 aa9.21□□□□□ -0.94
RTFDC1-204ENST00000449062 MIAQ16674 131 aa9.21□□□□□ -0.94
RTFDC1-204ENST00000449062 LINC00269Q8N2A0 174 aa9.21□□□□□ -0.94
RTFDC1-204ENST00000449062 RNF185Q96GF1 192 aa9.21□□□□□ -0.94
RTFDC1-204ENST00000449062 TMEM243Q9BU79 118 aa9.21□□□□□ -0.94
RTFDC1-204ENST00000449062 TMEM191AQ9H0A3 160 aa9.21□□□□□ -0.94
RTFDC1-204ENST00000449062 IGLV4-60A0A075B6I1 120 aa9.2□□□□□ -0.94
RTFDC1-204ENST00000449062 TRBV6-5A0A0K0K1A5 114 aa9.2□□□□□ -0.94
RTFDC1-204ENST00000449062 PEA15Q15121 130 aa9.2□□□□□ -0.94
RTFDC1-204ENST00000449062 Q6ZSA8 131 aa9.2□□□□□ -0.94
RTFDC1-204ENST00000449062 NUP35Q8NFH5 326 aa9.2□□□□□ -0.94
RTFDC1-204ENST00000449062 C1orf43Q9BWL3 253 aa9.2□□□□□ -0.94
RTFDC1-204ENST00000449062 RAB4AP20338 218 aa9.19□□□□□ -0.94
RTFDC1-204ENST00000449062 COTL1Q14019 142 aa9.19□□□□□ -0.94
RTFDC1-204ENST00000449062 SMIM15Q7Z3B0 74 aa9.19□□□□□ -0.94
RTFDC1-204ENST00000449062 NAT8Q9UHE5 227 aa9.19□□□□□ -0.94
RTFDC1-204ENST00000449062 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.18□□□□□ -0.94
RTFDC1-204ENST00000449062 SDHAF1A6NFY7 115 aa9.18□□□□□ -0.94
RTFDC1-204ENST00000449062 SMIM27A0A1W2PRY6 76 aa9.17□□□□□ -0.94
RTFDC1-204ENST00000449062 NCR2O95944 276 aa9.17□□□□□ -0.94
RTFDC1-204ENST00000449062 CRPP02741 224 aa9.17□□□□□ -0.94
RTFDC1-204ENST00000449062 POLR2KP53803 58 aaKnown RBP9.17□□□□□ -0.94
RTFDC1-204ENST00000449062 REG3AQ06141 175 aa9.17□□□□□ -0.94
RTFDC1-204ENST00000449062 FLG2Q5D862 2391 aaPredicted RBP9.17□□□□□ -0.94
RTFDC1-204ENST00000449062 RPS10P46783 165 aaKnown RBP9.16□□□□□ -0.94
RTFDC1-204ENST00000449062 AMTP48728 403 aa9.16□□□□□ -0.94
RTFDC1-204ENST00000449062 HAMPP81172 84 aa9.16□□□□□ -0.94
RTFDC1-204ENST00000449062 ADIRFQ15847 76 aa9.16□□□□□ -0.94
RTFDC1-204ENST00000449062 LINC01620Q4KN68 170 aa9.16□□□□□ -0.94
RTFDC1-204ENST00000449062 CLPSL2Q6UWE3 100 aa9.16□□□□□ -0.94
RTFDC1-204ENST00000449062 TRAV8-4A0A0B4J246 113 aa9.15□□□□□ -0.94
RTFDC1-204ENST00000449062 EPM2AB3EWF7 344 aa9.15□□□□□ -0.94
RTFDC1-204ENST00000449062 USP17L23D6RBM5 183 aa9.15□□□□□ -0.94
RTFDC1-204ENST00000449062 SMR3BP02814 79 aaPredicted RBP9.15□□□□□ -0.94
RTFDC1-204ENST00000449062 PRSS1P07477 247 aa9.15□□□□□ -0.94
RTFDC1-204ENST00000449062 ESDP10768 282 aa9.15□□□□□ -0.94
RTFDC1-204ENST00000449062 AMN1Q8IY45 258 aa9.15□□□□□ -0.94
RTFDC1-204ENST00000449062 BORCS7Q96B45 105 aa9.15□□□□□ -0.94
RTFDC1-204ENST00000449062 NAT8BQ9UHF3 227 aa9.15□□□□□ -0.94
RTFDC1-204ENST00000449062 H7C423 109 aa9.14□□□□□ -0.95
RTFDC1-204ENST00000449062 I3L3M4 83 aa9.14□□□□□ -0.95
RTFDC1-204ENST00000449062 TSHBP01222 138 aa9.14□□□□□ -0.95
RTFDC1-204ENST00000449062 RIGQ13278 110 aa9.14□□□□□ -0.95
RTFDC1-204ENST00000449062 MRAP2Q96G30 205 aa9.14□□□□□ -0.95
RTFDC1-204ENST00000449062 IGLV10-54A0A075B6I4 117 aa9.13□□□□□ -0.95
RTFDC1-204ENST00000449062 TRBV27A0A0K0K1C4 114 aa9.13□□□□□ -0.95
RTFDC1-204ENST00000449062 C14orf177Q52M58 125 aa9.13□□□□□ -0.95
RTFDC1-204ENST00000449062 NRACQ8N912 160 aa9.13□□□□□ -0.95
RTFDC1-204ENST00000449062 ST20Q9HBF5 79 aa9.13□□□□□ -0.95
RTFDC1-204ENST00000449062 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.12□□□□□ -0.95
RTFDC1-204ENST00000449062 IGKV2-29A2NJV5 120 aaPredicted RBP9.12□□□□□ -0.95
RTFDC1-204ENST00000449062 PMCHP20382 165 aa9.12□□□□□ -0.95
RTFDC1-204ENST00000449062 FAM104BQ5XKR9 115 aa9.12□□□□□ -0.95
RTFDC1-204ENST00000449062 DMBT1Q9UGM3 2413 aaPredicted RBP9.12□□□□□ -0.95
RTFDC1-204ENST00000449062 MYCBP2O75592 4640 aa9.11□□□□□ -0.95
RTFDC1-204ENST00000449062 SMKR1H3BMG3 65 aa9.11□□□□□ -0.95
RTFDC1-204ENST00000449062 UBE2L6O14933 153 aa9.11□□□□□ -0.95
RTFDC1-204ENST00000449062 HLA-DQA1P01909 254 aa9.11□□□□□ -0.95
RTFDC1-204ENST00000449062 FGF6P10767 208 aa9.11□□□□□ -0.95
RTFDC1-204ENST00000449062 Q5VSD8 79 aa9.11□□□□□ -0.95
RTFDC1-204ENST00000449062 DGAT2L7PQ6IED9 249 aa9.11□□□□□ -0.95
RTFDC1-204ENST00000449062 A0A1B0GXF2 115 aa9.1□□□□□ -0.95
RTFDC1-204ENST00000449062 APCSP02743 223 aa9.1□□□□□ -0.95
RTFDC1-204ENST00000449062 MRPL51Q4U2R6 128 aaKnown RBP9.1□□□□□ -0.95
RTFDC1-204ENST00000449062 C9orf163Q8N9P6 203 aa9.1□□□□□ -0.95
RTFDC1-204ENST00000449062 TRBV24-1A0A075B6N3 115 aa9.09□□□□□ -0.95
RTFDC1-204ENST00000449062 A0A1B0GW15 77 aa9.09□□□□□ -0.95
RTFDC1-204ENST00000449062 VCYO14598 125 aa9.09□□□□□ -0.95
RTFDC1-204ENST00000449062 SLPIP03973 132 aa9.09□□□□□ -0.95
RTFDC1-204ENST00000449062 CLRN3Q8NCR9 226 aa9.09□□□□□ -0.95
RTFDC1-204ENST00000449062 CHAC1Q9BUX1 264 aa9.09□□□□□ -0.95
RTFDC1-204ENST00000449062 TMEM242Q9NWH2 141 aa9.09□□□□□ -0.95
RTFDC1-204ENST00000449062 LINC00862A6NCI5 91 aa9.08□□□□□ -0.96
RTFDC1-204ENST00000449062 CAMPP49913 170 aa9.08□□□□□ -0.96
RTFDC1-204ENST00000449062 IFITM2Q01629 132 aa9.08□□□□□ -0.96
RTFDC1-204ENST00000449062 CLLU1Q5K131 121 aa9.08□□□□□ -0.96
RTFDC1-204ENST00000449062 SDIM1Q6ZPB5 146 aa9.08□□□□□ -0.96
RTFDC1-204ENST00000449062 SCXQ7RTU7 201 aa9.08□□□□□ -0.96
RTFDC1-204ENST00000449062 MRPL52Q86TS9 123 aaKnown RBP9.08□□□□□ -0.96
RTFDC1-204ENST00000449062 PPP1R17O96001 155 aa9.07□□□□□ -0.96
RTFDC1-204ENST00000449062 INAFM2P0DMQ5 153 aa9.07□□□□□ -0.96
RTFDC1-204ENST00000449062 ZNF25P17030 456 aaPredicted RBP9.07□□□□□ -0.96
RTFDC1-204ENST00000449062 RAB14P61106 215 aa9.07□□□□□ -0.96
RTFDC1-204ENST00000449062 SUMO2P61956 95 aaKnown RBP9.07□□□□□ -0.96
RTFDC1-204ENST00000449062 CNBPP62633 177 aaKnown RBP9.07□□□□□ -0.96
RTFDC1-204ENST00000449062 AMMECR1LQ6DCA0 310 aa9.07□□□□□ -0.96
RTFDC1-204ENST00000449062 RNASEKQ6P5S7 137 aaKnown RBP9.07□□□□□ -0.96
RTFDC1-204ENST00000449062 CDC42SE2Q9NRR3 84 aa9.07□□□□□ -0.96
RTFDC1-204ENST00000449062 HERC1Q15751 4861 aa9.07□□□□□ -0.96
RTFDC1-204ENST00000449062 GAGE12HA6NDE8 117 aa9.06□□□□□ -0.96
RTFDC1-204ENST00000449062 FAM229AH3BQW9 127 aa9.06□□□□□ -0.96
RTFDC1-204ENST00000449062 RPL32P62910 135 aaKnown RBP9.06□□□□□ -0.96
RTFDC1-204ENST00000449062 OR5A1Q8NGJ0 315 aa9.06□□□□□ -0.96
RTFDC1-204ENST00000449062 CIRBP-AS1Q8TBR5 109 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 75.3 ms