RNA–Protein interactions for RNA: ENST00000448940.5

CDC42BPA-209, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 7,355 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-209ENST00000448940 PFN2P35080 140 aa4.2□□□□□ -1.74
CDC42BPA-209ENST00000448940 MUSTN1Q8IVN3 82 aa4.2□□□□□ -1.74
CDC42BPA-209ENST00000448940 ZNF625Q96I27 306 aaPredicted RBP4.2□□□□□ -1.74
CDC42BPA-209ENST00000448940 C14orf132Q9NPU4 83 aa4.2□□□□□ -1.74
CDC42BPA-209ENST00000448940 ZNF492Q9P255 531 aa4.2□□□□□ -1.74
CDC42BPA-209ENST00000448940 TP53TG1Q9Y2A0 90 aa4.2□□□□□ -1.74
CDC42BPA-209ENST00000448940 SMR3BP02814 79 aaPredicted RBP4.2□□□□□ -1.74
CDC42BPA-209ENST00000448940 NPC2P61916 151 aa4.2□□□□□ -1.74
CDC42BPA-209ENST00000448940 TRPT1Q86TN4 253 aaKnown RBP4.2□□□□□ -1.74
CDC42BPA-209ENST00000448940 ZNF664Q8N3J9 261 aa4.2□□□□□ -1.74
CDC42BPA-209ENST00000448940 C7orf77A4D0Y5 90 aa4.2□□□□□ -1.74
CDC42BPA-209ENST00000448940 EDN2P20800 178 aa4.2□□□□□ -1.74
CDC42BPA-209ENST00000448940 AGPAT4-IT1Q9H0P7 198 aa4.2□□□□□ -1.74
CDC42BPA-209ENST00000448940 HTTP42858 3142 aa4.2□□□□□ -1.74
CDC42BPA-209ENST00000448940 IGHV3-64A0A075B6Q5 118 aa4.2□□□□□ -1.74
CDC42BPA-209ENST00000448940 K7EQD1 137 aa4.2□□□□□ -1.74
CDC42BPA-209ENST00000448940 C18orf15Q96N68 181 aa4.2□□□□□ -1.74
CDC42BPA-209ENST00000448940 SH2D1AO60880 128 aa4.19□□□□□ -1.74
CDC42BPA-209ENST00000448940 INAFM2P0DMQ5 153 aa4.19□□□□□ -1.74
CDC42BPA-209ENST00000448940 IFITM3Q01628 133 aa4.19□□□□□ -1.74
CDC42BPA-209ENST00000448940 SCO2A0A1W2PP80 73 aa4.19□□□□□ -1.74
CDC42BPA-209ENST00000448940 CCL20P78556 96 aa4.19□□□□□ -1.74
CDC42BPA-209ENST00000448940 HAMPP81172 84 aa4.19□□□□□ -1.74
CDC42BPA-209ENST00000448940 Q6ZNX1 250 aa4.19□□□□□ -1.74
CDC42BPA-209ENST00000448940 DNAJC30Q96LL9 226 aa4.19□□□□□ -1.74
CDC42BPA-209ENST00000448940 CLUHP3Q96NS8 147 aa4.19□□□□□ -1.74
CDC42BPA-209ENST00000448940 CHTOPQ9Y3Y2 248 aaKnown RBP4.19□□□□□ -1.74
CDC42BPA-209ENST00000448940 LINC01549A6NIU2 74 aa4.19□□□□□ -1.74
CDC42BPA-209ENST00000448940 DLEU1O43261 78 aa4.19□□□□□ -1.74
CDC42BPA-209ENST00000448940 KRTAP1-3Q8IUG1 177 aa4.19□□□□□ -1.74
CDC42BPA-209ENST00000448940 RASL10AQ92737 203 aa4.19□□□□□ -1.74
CDC42BPA-209ENST00000448940 SNHG12Q9BXW3 62 aa4.19□□□□□ -1.74
CDC42BPA-209ENST00000448940 CRYBG3Q68DQ2 2970 aa4.19□□□□□ -1.74
CDC42BPA-209ENST00000448940 RPL37AP61513 92 aaKnown RBP4.19□□□□□ -1.74
CDC42BPA-209ENST00000448940 ZNF414Q96IQ9 312 aa4.19□□□□□ -1.74
CDC42BPA-209ENST00000448940 REV3LO60673 3130 aa4.18□□□□□ -1.74
CDC42BPA-209ENST00000448940 FAM231DQ6ZW35 169 aa4.18□□□□□ -1.74
CDC42BPA-209ENST00000448940 ORMDL3Q8N138 153 aa4.18□□□□□ -1.74
CDC42BPA-209ENST00000448940 VSIRQ9H7M9 311 aa4.18□□□□□ -1.74
CDC42BPA-209ENST00000448940 IZUMO1RA6ND01 250 aa4.18□□□□□ -1.74
CDC42BPA-209ENST00000448940 NDUFA1O15239 70 aa4.18□□□□□ -1.74
CDC42BPA-209ENST00000448940 FOXI1Q12951 378 aa4.18□□□□□ -1.74
CDC42BPA-209ENST00000448940 CASC10Q5T4H9 136 aa4.18□□□□□ -1.74
CDC42BPA-209ENST00000448940 AMN1Q8IY45 258 aa4.18□□□□□ -1.74
CDC42BPA-209ENST00000448940 C2orf82Q6UX34 121 aa4.18□□□□□ -1.74
CDC42BPA-209ENST00000448940 DIRC1Q969H9 104 aa4.18□□□□□ -1.74
CDC42BPA-209ENST00000448940 CARD19Q96LW7 228 aa4.18□□□□□ -1.74
CDC42BPA-209ENST00000448940 C5orf38Q86SI9 138 aa4.18□□□□□ -1.74
CDC42BPA-209ENST00000448940 LAMA3Q16787 3333 aa4.18□□□□□ -1.74
CDC42BPA-209ENST00000448940 CFAP54Q96N23 3096 aa4.18□□□□□ -1.74
CDC42BPA-209ENST00000448940 H2BFSP57053 126 aa4.18□□□□□ -1.74
CDC42BPA-209ENST00000448940 FLG2Q5D862 2391 aaPredicted RBP4.18□□□□□ -1.74
CDC42BPA-209ENST00000448940 ACYP1P07311 99 aa4.18□□□□□ -1.74
CDC42BPA-209ENST00000448940 FUSP35637 526 aaKnown RBP eCLIP4.18□□□□□ -1.74
CDC42BPA-209ENST00000448940 ORMDL2Q53FV1 153 aa4.17□□□□□ -1.74
CDC42BPA-209ENST00000448940 C9orf47Q6ZRZ4 202 aa4.17□□□□□ -1.74
CDC42BPA-209ENST00000448940 A0A096LNT2 108 aa4.17□□□□□ -1.74
CDC42BPA-209ENST00000448940 HIGD2AQ9BW72 106 aa4.17□□□□□ -1.74
CDC42BPA-209ENST00000448940 RBAKDNA6NC62 111 aa4.17□□□□□ -1.74
CDC42BPA-209ENST00000448940 UBL5Q9BZL1 73 aa4.17□□□□□ -1.74
CDC42BPA-209ENST00000448940 E9PLD3 99 aa4.17□□□□□ -1.74
CDC42BPA-209ENST00000448940 ZNF479Q96JC4 524 aa4.17□□□□□ -1.74
CDC42BPA-209ENST00000448940 CDIP1Q9H305 208 aa4.17□□□□□ -1.74
CDC42BPA-209ENST00000448940 CARHSP1Q9Y2V2 147 aaKnown RBP4.17□□□□□ -1.74
CDC42BPA-209ENST00000448940 KRTAP1-1Q07627 177 aa4.17□□□□□ -1.74
CDC42BPA-209ENST00000448940 DAZ2Q13117 558 aaKnown RBP4.17□□□□□ -1.74
CDC42BPA-209ENST00000448940 DAZ4Q86SG3 579 aaKnown RBP4.17□□□□□ -1.74
CDC42BPA-209ENST00000448940 OVOL2Q9BRP0 275 aa4.17□□□□□ -1.74
CDC42BPA-209ENST00000448940 CHAC1Q9BUX1 264 aa4.17□□□□□ -1.74
CDC42BPA-209ENST00000448940 DAZ3Q9NR90 486 aaKnown RBP4.17□□□□□ -1.74
CDC42BPA-209ENST00000448940 COL27A1Q8IZC6 1860 aaPredicted RBP4.17□□□□□ -1.74
CDC42BPA-209ENST00000448940 A0A096LNI7 61 aa4.16□□□□□ -1.74
CDC42BPA-209ENST00000448940 HBDP02042 147 aa4.16□□□□□ -1.74
CDC42BPA-209ENST00000448940 CRIP2P52943 208 aaPredicted RBP4.16□□□□□ -1.74
CDC42BPA-209ENST00000448940 MP68P56378 58 aa4.16□□□□□ -1.74
CDC42BPA-209ENST00000448940 SAMD5Q5TGI4 173 aa4.16□□□□□ -1.74
CDC42BPA-209ENST00000448940 Q86TA4 180 aa4.16□□□□□ -1.74
CDC42BPA-209ENST00000448940 SLC25A29Q8N8R3 303 aa4.16□□□□□ -1.74
CDC42BPA-209ENST00000448940 RBM38Q9H0Z9 239 aaKnown RBP4.16□□□□□ -1.74
CDC42BPA-209ENST00000448940 COL6A3P12111 3177 aa4.16□□□□□ -1.74
CDC42BPA-209ENST00000448940 UBR5O95071 2799 aaPredicted RBP4.16□□□□□ -1.74
CDC42BPA-209ENST00000448940 NMBP08949 121 aa4.16□□□□□ -1.74
CDC42BPA-209ENST00000448940 CXCL5P42830 114 aa4.16□□□□□ -1.74
CDC42BPA-209ENST00000448940 BEAN1Q3B7T3 259 aa4.16□□□□□ -1.74
CDC42BPA-209ENST00000448940 ODF3L2Q3SX64 289 aa4.16□□□□□ -1.74
CDC42BPA-209ENST00000448940 TMEM75Q8N9X5 138 aa4.16□□□□□ -1.74
CDC42BPA-209ENST00000448940 E7EUB6 86 aa4.16□□□□□ -1.74
CDC42BPA-209ENST00000448940 MRPL18Q9H0U6 180 aaKnown RBP4.16□□□□□ -1.74
CDC42BPA-209ENST00000448940 M0QXV9 152 aa4.16□□□□□ -1.74
CDC42BPA-209ENST00000448940 BTCP35070 178 aa4.16□□□□□ -1.74
CDC42BPA-209ENST00000448940 EGFEM1PQ0D2K5 195 aa4.16□□□□□ -1.74
CDC42BPA-209ENST00000448940 PCSK5Q92824 1860 aa4.16□□□□□ -1.74
CDC42BPA-209ENST00000448940 SOCS3O14543 225 aa4.16□□□□□ -1.74
CDC42BPA-209ENST00000448940 IGLV2-14P01704 120 aa4.16□□□□□ -1.74
CDC42BPA-209ENST00000448940 CRYGBP07316 175 aa4.16□□□□□ -1.74
CDC42BPA-209ENST00000448940 CR1P17927 2039 aa4.16□□□□□ -1.74
CDC42BPA-209ENST00000448940 TRAV4A0A0B4J268 109 aa4.15□□□□□ -1.74
CDC42BPA-209ENST00000448940 HIGD1CA8MV81 97 aa4.15□□□□□ -1.74
CDC42BPA-209ENST00000448940 Q6ZTI0 123 aa4.15□□□□□ -1.74
CDC42BPA-209ENST00000448940 LYZL1Q6UWQ5 148 aa4.15□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 83.8 ms