RNA–Protein interactions for RNA: ENST00000448611.6

LMNA-208, Transcript of lamin A/C, humanhuman

TSL 2 BASIC

Gene LMNA, Length 1,943 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-208ENST00000448611 GAGE12IP0CL82 117 aa12.64□□□□□ -0.39
LMNA-208ENST00000448611 NMUP48645 174 aa12.64□□□□□ -0.39
LMNA-208ENST00000448611 PMVKQ15126 192 aa12.64□□□□□ -0.39
LMNA-208ENST00000448611 C2orf91Q6ZV80 131 aa12.64□□□□□ -0.39
LMNA-208ENST00000448611 CST9LQ9H4G1 147 aa12.64□□□□□ -0.39
LMNA-208ENST00000448611 BATFQ16520 125 aa12.63□□□□□ -0.39
LMNA-208ENST00000448611 PCP2Q8IVA1 136 aa12.63□□□□□ -0.39
LMNA-208ENST00000448611 X6R8D5 127 aa12.63□□□□□ -0.39
LMNA-208ENST00000448611 TRBV10-1A0A0K0K1A3 114 aa12.62□□□□□ -0.39
LMNA-208ENST00000448611 K7EQD1 137 aa12.62□□□□□ -0.39
LMNA-208ENST00000448611 DLEU1O43261 78 aa12.62□□□□□ -0.39
LMNA-208ENST00000448611 CHCHD7Q9BUK0 85 aa12.62□□□□□ -0.39
LMNA-208ENST00000448611 TRGV2A0A075B6R0 118 aa12.62□□□□□ -0.39
LMNA-208ENST00000448611 KIR2DL5BQ8NHK3 375 aa12.62□□□□□ -0.39
LMNA-208ENST00000448611 IGLV4-69A0A075B6H9 119 aa12.61□□□□□ -0.39
LMNA-208ENST00000448611 SLC25A29Q8N8R3 303 aa12.61□□□□□ -0.39
LMNA-208ENST00000448611 ZNRF2Q8NHG8 242 aa12.61□□□□□ -0.39
LMNA-208ENST00000448611 PHLDA1Q8WV24 401 aaPredicted RBP12.61□□□□□ -0.39
LMNA-208ENST00000448611 OPRPNQ99935 248 aaPredicted RBP12.61□□□□□ -0.39
LMNA-208ENST00000448611 TRBV7-3A0A075B6L6 115 aa12.6□□□□□ -0.39
LMNA-208ENST00000448611 IGHV3-38A0A0C4DH36 116 aa12.6□□□□□ -0.39
LMNA-208ENST00000448611 CIDEAO60543 219 aa12.6□□□□□ -0.39
LMNA-208ENST00000448611 HINT1P49773 126 aaPredicted RBP12.6□□□□□ -0.39
LMNA-208ENST00000448611 PYGO1Q9Y3Y4 419 aa12.6□□□□□ -0.39
LMNA-208ENST00000448611 A0A1B0GV90 55 aa12.6□□□□□ -0.39
LMNA-208ENST00000448611 SMIM9A6NGZ8 99 aa12.6□□□□□ -0.39
LMNA-208ENST00000448611 TRRAPQ9Y4A5 3859 aa12.59□□□□□ -0.39
LMNA-208ENST00000448611 IGLV4-3A0A075B6K6 122 aa12.59□□□□□ -0.39
LMNA-208ENST00000448611 EMP1P54849 157 aa12.59□□□□□ -0.39
LMNA-208ENST00000448611 COTL1Q14019 142 aa12.59□□□□□ -0.39
LMNA-208ENST00000448611 APOC4P55056 127 aa12.58□□□□□ -0.39
LMNA-208ENST00000448611 RPL36AP83881 106 aaKnown RBP12.58□□□□□ -0.39
LMNA-208ENST00000448611 LINC00612Q8N6U2 182 aa12.58□□□□□ -0.39
LMNA-208ENST00000448611 RPL36ALQ969Q0 106 aaKnown RBP12.58□□□□□ -0.39
LMNA-208ENST00000448611 FAM104AQ969W3 186 aa12.58□□□□□ -0.39
LMNA-208ENST00000448611 C11orf86A6NJI1 115 aa12.58□□□□□ -0.4
LMNA-208ENST00000448611 MPV17L2Q567V2 206 aa12.58□□□□□ -0.4
LMNA-208ENST00000448611 TTTY13Q9BZ97 58 aa12.58□□□□□ -0.4
LMNA-208ENST00000448611 SIVA1O15304 175 aa12.57□□□□□ -0.4
LMNA-208ENST00000448611 KRTAP21-3Q3LHN1 58 aa12.57□□□□□ -0.4
LMNA-208ENST00000448611 PAPPA-AS1Q5QFB9 102 aa12.57□□□□□ -0.4
LMNA-208ENST00000448611 UBE2D3P61077 147 aa12.56□□□□□ -0.4
LMNA-208ENST00000448611 UBE2D2P62837 147 aa12.56□□□□□ -0.4
LMNA-208ENST00000448611 COL5A1-AS1Q5SY13 56 aa12.56□□□□□ -0.4
LMNA-208ENST00000448611 TRBV6-4A0A1B0GX49 114 aa12.56□□□□□ -0.4
LMNA-208ENST00000448611 NPSP0C0P6 89 aa12.56□□□□□ -0.4
LMNA-208ENST00000448611 FHL2Q14192 279 aa12.56□□□□□ -0.4
LMNA-208ENST00000448611 ZMAT5Q9UDW3 170 aaKnown RBP12.56□□□□□ -0.4
LMNA-208ENST00000448611 UBE2D4Q9Y2X8 147 aa12.56□□□□□ -0.4
LMNA-208ENST00000448611 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.55□□□□□ -0.4
LMNA-208ENST00000448611 IGKV2-29A2NJV5 120 aaPredicted RBP12.55□□□□□ -0.4
LMNA-208ENST00000448611 GAGE12JA6NER3 117 aa12.55□□□□□ -0.4
LMNA-208ENST00000448611 GAGE1Q13065 139 aa12.55□□□□□ -0.4
LMNA-208ENST00000448611 GAGE4Q13068 117 aa12.55□□□□□ -0.4
LMNA-208ENST00000448611 GAGE5Q13069 117 aa12.55□□□□□ -0.4
LMNA-208ENST00000448611 DEFB135Q30KP9 77 aa12.55□□□□□ -0.4
LMNA-208ENST00000448611 GAGE13Q4V321 117 aa12.55□□□□□ -0.4
LMNA-208ENST00000448611 CEMP1Q6PRD7 247 aaPredicted RBP12.55□□□□□ -0.4
LMNA-208ENST00000448611 DAZ4Q86SG3 579 aaKnown RBP12.55□□□□□ -0.4
LMNA-208ENST00000448611 DAZ3Q9NR90 486 aaKnown RBP12.55□□□□□ -0.4
LMNA-208ENST00000448611 SPANXA1Q9NS26 97 aa12.55□□□□□ -0.4
LMNA-208ENST00000448611 TRGV4A0A0C4DH28 118 aa12.54□□□□□ -0.4
LMNA-208ENST00000448611 IGHV4-30-4P0DP06 118 aa12.54□□□□□ -0.4
LMNA-208ENST00000448611 CRYBA4P53673 196 aa12.54□□□□□ -0.4
LMNA-208ENST00000448611 BVES-AS1Q5T3Y7 98 aa12.54□□□□□ -0.4
LMNA-208ENST00000448611 AMELXQ99217 191 aa12.54□□□□□ -0.4
LMNA-208ENST00000448611 VCX2Q9H322 139 aa12.54□□□□□ -0.4
LMNA-208ENST00000448611 E9PLD3 99 aa12.54□□□□□ -0.4
LMNA-208ENST00000448611 OXLD1Q5BKU9 147 aa12.54□□□□□ -0.4
LMNA-208ENST00000448611 NFE4Q86UQ8 179 aa12.54□□□□□ -0.4
LMNA-208ENST00000448611 MAPKAPK5-AS1Q8N8E1 139 aa12.54□□□□□ -0.4
LMNA-208ENST00000448611 TRAV8-6A0A0B4J262 113 aa12.53□□□□□ -0.4
LMNA-208ENST00000448611 DEFB130BP0DP73 79 aa12.53□□□□□ -0.4
LMNA-208ENST00000448611 DEFB130AP0DP74 79 aa12.53□□□□□ -0.4
LMNA-208ENST00000448611 TMEM97Q5BJF2 176 aa12.53□□□□□ -0.4
LMNA-208ENST00000448611 NTM-AS1Q6ZSK4 140 aa12.53□□□□□ -0.4
LMNA-208ENST00000448611 LOC100131303A0A0U1RQF7 123 aa12.52□□□□□ -0.41
LMNA-208ENST00000448611 OR11H2Q8NH07 326 aa12.52□□□□□ -0.41
LMNA-208ENST00000448611 PRADC1Q9BSG0 188 aa12.51□□□□□ -0.41
LMNA-208ENST00000448611 CHAC1Q9BUX1 264 aa12.51□□□□□ -0.41
LMNA-208ENST00000448611 HIGD1BQ9P298 99 aa12.51□□□□□ -0.41
LMNA-208ENST00000448611 TRBV25-1A0A075B6N4 114 aa12.5□□□□□ -0.41
LMNA-208ENST00000448611 KRTAP10-11P60412 298 aa12.5□□□□□ -0.41
LMNA-208ENST00000448611 FAM222AQ5U5X8 452 aa12.5□□□□□ -0.41
LMNA-208ENST00000448611 TIMM21Q9BVV7 248 aa12.5□□□□□ -0.41
LMNA-208ENST00000448611 A0A0J9YXV3 536 aa12.49□□□□□ -0.41
LMNA-208ENST00000448611 LYRM9A8MSI8 78 aa12.49□□□□□ -0.41
LMNA-208ENST00000448611 EGFEM1PQ0D2K5 195 aa12.49□□□□□ -0.41
LMNA-208ENST00000448611 HSD52Q0P140 79 aa12.49□□□□□ -0.41
LMNA-208ENST00000448611 TMEM170BQ5T4T1 132 aa12.49□□□□□ -0.41
LMNA-208ENST00000448611 GTSF1LQ9H1H1 148 aa12.49□□□□□ -0.41
LMNA-208ENST00000448611 IGHV4-28A0A0C4DH34 117 aa12.49□□□□□ -0.41
LMNA-208ENST00000448611 LINC00694P0DN24 101 aa12.49□□□□□ -0.41
LMNA-208ENST00000448611 HERVK_113P61574 105 aa12.49□□□□□ -0.41
LMNA-208ENST00000448611 RNASE13Q5GAN3 156 aaKnown RBP12.49□□□□□ -0.41
LMNA-208ENST00000448611 Q6ZUT4 128 aa12.49□□□□□ -0.41
LMNA-208ENST00000448611 SBSPONQ8IVN8 264 aa12.49□□□□□ -0.41
LMNA-208ENST00000448611 MRPS36P82909 103 aaKnown RBP12.48□□□□□ -0.41
LMNA-208ENST00000448611 RNF183Q96D59 192 aa12.48□□□□□ -0.41
LMNA-208ENST00000448611 ANK2Q01484 3957 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms