RNA–Protein interactions for RNA: ENST00000448183.6

NEDD9-204, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 1 (best)

Gene NEDD9, Length 4,934 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-204ENST00000448183 BPY2O14599 106 aa5.88□□□□□ -1.47
NEDD9-204ENST00000448183 ZNF22P17026 224 aaPredicted RBP5.88□□□□□ -1.47
NEDD9-204ENST00000448183 BRK1Q8WUW1 75 aa5.88□□□□□ -1.47
NEDD9-204ENST00000448183 CDKN2A-AS1Q9UH64 79 aa5.88□□□□□ -1.47
NEDD9-204ENST00000448183 COL4A3Q01955 1670 aa5.88□□□□□ -1.47
NEDD9-204ENST00000448183 A6NDX4 124 aa5.88□□□□□ -1.47
NEDD9-204ENST00000448183 DEFB135Q30KP9 77 aa5.88□□□□□ -1.47
NEDD9-204ENST00000448183 CRIP3Q6Q6R5 217 aa5.88□□□□□ -1.47
NEDD9-204ENST00000448183 C4orf3Q8WVX3 66 aa5.88□□□□□ -1.47
NEDD9-204ENST00000448183 FAM110AQ9BQ89 295 aa5.88□□□□□ -1.47
NEDD9-204ENST00000448183 FBXL19-AS1Q494R0 122 aa5.88□□□□□ -1.47
NEDD9-204ENST00000448183 P0DMU3 169 aa5.87□□□□□ -1.47
NEDD9-204ENST00000448183 FAM231AP0DMU4 169 aa5.87□□□□□ -1.47
NEDD9-204ENST00000448183 FAM231CP0DMU5 169 aa5.87□□□□□ -1.47
NEDD9-204ENST00000448183 UFSP1Q6NVU6 142 aa5.87□□□□□ -1.47
NEDD9-204ENST00000448183 TNRC6BQ9UPQ9 1833 aaKnown RBP5.87□□□□□ -1.47
NEDD9-204ENST00000448183 RBX1P62877 108 aa5.87□□□□□ -1.47
NEDD9-204ENST00000448183 EIF4EBP1Q13541 118 aaPredicted RBP5.87□□□□□ -1.47
NEDD9-204ENST00000448183 ATP5EP2Q5VTU8 51 aa5.87□□□□□ -1.47
NEDD9-204ENST00000448183 ZFAND2AQ8N6M9 145 aa5.87□□□□□ -1.47
NEDD9-204ENST00000448183 MAPKAPK5-AS1Q8N8E1 139 aa5.87□□□□□ -1.47
NEDD9-204ENST00000448183 MAP6D1Q9H9H5 199 aa5.87□□□□□ -1.47
NEDD9-204ENST00000448183 OTOGLQ3ZCN5 2332 aa5.87□□□□□ -1.47
NEDD9-204ENST00000448183 TMEM223A0PJW6 202 aa5.87□□□□□ -1.47
NEDD9-204ENST00000448183 COL4A4P53420 1690 aaPredicted RBP5.87□□□□□ -1.47
NEDD9-204ENST00000448183 IGLV4-3A0A075B6K6 122 aa5.87□□□□□ -1.47
NEDD9-204ENST00000448183 ODF3BA8MYP8 253 aa5.87□□□□□ -1.47
NEDD9-204ENST00000448183 SDIM1Q6ZPB5 146 aa5.87□□□□□ -1.47
NEDD9-204ENST00000448183 TRBV30A0A0K0K1B3 111 aa5.86□□□□□ -1.47
NEDD9-204ENST00000448183 DEFB4AO15263 64 aa5.86□□□□□ -1.47
NEDD9-204ENST00000448183 TRIAP1O43715 76 aa5.86□□□□□ -1.47
NEDD9-204ENST00000448183 LINC00308Q8TCZ7 52 aa5.86□□□□□ -1.47
NEDD9-204ENST00000448183 LINC00467Q9BRT7 94 aa5.86□□□□□ -1.47
NEDD9-204ENST00000448183 NAV3Q8IVL0 2385 aa5.86□□□□□ -1.47
NEDD9-204ENST00000448183 A0A1W2PNU3 283 aaPredicted RBP5.86□□□□□ -1.47
NEDD9-204ENST00000448183 F8W735 103 aaPredicted RBP5.86□□□□□ -1.47
NEDD9-204ENST00000448183 K7EQG2 157 aa5.86□□□□□ -1.47
NEDD9-204ENST00000448183 C1orf229Q6ZS94 237 aaPredicted RBP5.86□□□□□ -1.47
NEDD9-204ENST00000448183 Q6ZTI0 123 aa5.86□□□□□ -1.47
NEDD9-204ENST00000448183 U3KQK5 164 aa5.86□□□□□ -1.47
NEDD9-204ENST00000448183 LTBP2Q14767 1821 aa5.85□□□□□ -1.47
NEDD9-204ENST00000448183 FAM236DA0A1B0GTK5 79 aa5.85□□□□□ -1.47
NEDD9-204ENST00000448183 WISP2O76076 250 aa5.85□□□□□ -1.47
NEDD9-204ENST00000448183 FAM236CP0DP71 79 aa5.85□□□□□ -1.47
NEDD9-204ENST00000448183 CRIP1P50238 77 aa5.85□□□□□ -1.47
NEDD9-204ENST00000448183 LINC01548A6NM66 108 aa5.85□□□□□ -1.47
NEDD9-204ENST00000448183 C3orf22Q8N5N4 141 aa5.85□□□□□ -1.47
NEDD9-204ENST00000448183 MYO9AB2RTY4 2548 aa5.85□□□□□ -1.47
NEDD9-204ENST00000448183 H0Y9J4 135 aa5.85□□□□□ -1.47
NEDD9-204ENST00000448183 TNFRSF13BO14836 293 aaPredicted RBP5.85□□□□□ -1.47
NEDD9-204ENST00000448183 SVIPQ8NHG7 77 aa5.85□□□□□ -1.47
NEDD9-204ENST00000448183 ZNF106Q9H2Y7 1883 aaKnown RBP5.85□□□□□ -1.47
NEDD9-204ENST00000448183 IBA57-AS1B1ANH7 110 aa5.85□□□□□ -1.47
NEDD9-204ENST00000448183 IGF1P05019 195 aa5.85□□□□□ -1.47
NEDD9-204ENST00000448183 RNF185Q96GF1 192 aa5.85□□□□□ -1.47
NEDD9-204ENST00000448183 NRGNQ92686 78 aa5.84□□□□□ -1.47
NEDD9-204ENST00000448183 LMO4P61968 165 aa5.84□□□□□ -1.47
NEDD9-204ENST00000448183 INSL3P51460 131 aa5.84□□□□□ -1.47
NEDD9-204ENST00000448183 REG3AQ06141 175 aa5.84□□□□□ -1.48
NEDD9-204ENST00000448183 LINC00269Q8N2A0 174 aa5.84□□□□□ -1.48
NEDD9-204ENST00000448183 H7C423 109 aa5.83□□□□□ -1.48
NEDD9-204ENST00000448183 M0QY20 66 aa5.83□□□□□ -1.48
NEDD9-204ENST00000448183 C2orf91Q6ZV80 131 aa5.83□□□□□ -1.48
NEDD9-204ENST00000448183 ZFAND3Q9H8U3 227 aa5.83□□□□□ -1.48
NEDD9-204ENST00000448183 CCDC168Q8NDH2 2452 aa5.83□□□□□ -1.48
NEDD9-204ENST00000448183 TRBV27A0A0K0K1C4 114 aa5.83□□□□□ -1.48
NEDD9-204ENST00000448183 MRPS12O15235 138 aaKnown RBP5.83□□□□□ -1.48
NEDD9-204ENST00000448183 PIK3CD-AS1Q5SR53 167 aa5.83□□□□□ -1.48
NEDD9-204ENST00000448183 ENHOQ6UWT2 76 aa5.83□□□□□ -1.48
NEDD9-204ENST00000448183 C20orf173Q96LM9 149 aa5.83□□□□□ -1.48
NEDD9-204ENST00000448183 HIVEP3Q5T1R4 2406 aa5.82□□□□□ -1.48
NEDD9-204ENST00000448183 SLPIP03973 132 aa5.82□□□□□ -1.48
NEDD9-204ENST00000448183 CHCHD10Q8WYQ3 142 aaPredicted RBP5.82□□□□□ -1.48
NEDD9-204ENST00000448183 CLUHP3Q96NS8 147 aa5.82□□□□□ -1.48
NEDD9-204ENST00000448183 IMUPQ9GZP8 106 aa5.82□□□□□ -1.48
NEDD9-204ENST00000448183 NAV2Q8IVL1 2488 aa5.82□□□□□ -1.48
NEDD9-204ENST00000448183 TRBV6-5A0A0K0K1A5 114 aa5.82□□□□□ -1.48
NEDD9-204ENST00000448183 EBI3Q14213 229 aa5.82□□□□□ -1.48
NEDD9-204ENST00000448183 PYGO1Q9Y3Y4 419 aa5.82□□□□□ -1.48
NEDD9-204ENST00000448183 FSTL3O95633 263 aa5.82□□□□□ -1.48
NEDD9-204ENST00000448183 IGLV2-11P01706 119 aa5.82□□□□□ -1.48
NEDD9-204ENST00000448183 SMAD5-AS1Q9Y6J3 95 aa5.82□□□□□ -1.48
NEDD9-204ENST00000448183 CFAP126Q5VTH2 177 aa5.81□□□□□ -1.48
NEDD9-204ENST00000448183 WFDC11Q8NEX6 87 aa5.81□□□□□ -1.48
NEDD9-204ENST00000448183 HIGD2AQ9BW72 106 aa5.81□□□□□ -1.48
NEDD9-204ENST00000448183 TIMM17BO60830 172 aa5.81□□□□□ -1.48
NEDD9-204ENST00000448183 C4orf48Q5BLP8 95 aa5.81□□□□□ -1.48
NEDD9-204ENST00000448183 Q8NA96 180 aa5.81□□□□□ -1.48
NEDD9-204ENST00000448183 SPTSSBQ8NFR3 76 aa5.81□□□□□ -1.48
NEDD9-204ENST00000448183 MPLKIPQ8TAP9 179 aa5.81□□□□□ -1.48
NEDD9-204ENST00000448183 FAM240AA0A1B0GVK7 77 aa5.81□□□□□ -1.48
NEDD9-204ENST00000448183 TECTAO75443 2155 aa5.81□□□□□ -1.48
NEDD9-204ENST00000448183 FAM222AQ5U5X8 452 aa5.81□□□□□ -1.48
NEDD9-204ENST00000448183 B9D2Q9BPU9 175 aa5.81□□□□□ -1.48
NEDD9-204ENST00000448183 IGKV4-1P06312 121 aa5.81□□□□□ -1.48
NEDD9-204ENST00000448183 SCXQ7RTU7 201 aa5.81□□□□□ -1.48
NEDD9-204ENST00000448183 ABCA2Q9BZC7 2435 aa5.81□□□□□ -1.48
NEDD9-204ENST00000448183 NDUFC2-KCTD14E9PQ53 114 aa5.8□□□□□ -1.48
NEDD9-204ENST00000448183 SEC61GP60059 68 aa5.8□□□□□ -1.48
NEDD9-204ENST00000448183 SERP2Q8N6R1 65 aa5.8□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms