RNA–Protein interactions for RNA: ENST00000447601.6

FAM3A-215, Transcript of family with sequence similarity 3 member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FAM3A, Length 1,800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-215ENST00000447601 NPSP0C0P6 89 aa14.02□□□□□ -0.16
FAM3A-215ENST00000447601 MAPKAPK5-AS1Q8N8E1 139 aa14.02□□□□□ -0.16
FAM3A-215ENST00000447601 IGLV4-3A0A075B6K6 122 aa14.01□□□□□ -0.17
FAM3A-215ENST00000447601 COTL1Q14019 142 aa14.01□□□□□ -0.17
FAM3A-215ENST00000447601 ZNF479Q96JC4 524 aa14.01□□□□□ -0.17
FAM3A-215ENST00000447601 PRADC1Q9BSG0 188 aa14.01□□□□□ -0.17
FAM3A-215ENST00000447601 TRBV10-1A0A0K0K1A3 114 aa14.01□□□□□ -0.17
FAM3A-215ENST00000447601 MYMXA0A1B0GTQ4 84 aa14.01□□□□□ -0.17
FAM3A-215ENST00000447601 PLAC8L1A1L4L8 177 aa14.01□□□□□ -0.17
FAM3A-215ENST00000447601 EMP1P54849 157 aa14.01□□□□□ -0.17
FAM3A-215ENST00000447601 OPRPNQ99935 248 aaPredicted RBP14.01□□□□□ -0.17
FAM3A-215ENST00000447601 VCX2Q9H322 139 aa14.01□□□□□ -0.17
FAM3A-215ENST00000447601 CRYBA4P53673 196 aa14□□□□□ -0.17
FAM3A-215ENST00000447601 Q6ZVH6 145 aa14□□□□□ -0.17
FAM3A-215ENST00000447601 NFE4Q86UQ8 179 aa14□□□□□ -0.17
FAM3A-215ENST00000447601 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP14□□□□□ -0.17
FAM3A-215ENST00000447601 CITED1Q99966 193 aa14□□□□□ -0.17
FAM3A-215ENST00000447601 CHCHD7Q9BUK0 85 aa14□□□□□ -0.17
FAM3A-215ENST00000447601 K7EQD1 137 aa13.99□□□□□ -0.17
FAM3A-215ENST00000447601 SPANXA1Q9NS26 97 aa13.99□□□□□ -0.17
FAM3A-215ENST00000447601 NSD1Q96L73 2696 aaPredicted RBP13.99□□□□□ -0.17
FAM3A-215ENST00000447601 CIDEAO60543 219 aa13.99□□□□□ -0.17
FAM3A-215ENST00000447601 ZNRF2Q8NHG8 242 aa13.99□□□□□ -0.17
FAM3A-215ENST00000447601 OVOL2Q9BRP0 275 aa13.99□□□□□ -0.17
FAM3A-215ENST00000447601 TRBV7-3A0A075B6L6 115 aa13.98□□□□□ -0.17
FAM3A-215ENST00000447601 RPL36AP83881 106 aaKnown RBP13.98□□□□□ -0.17
FAM3A-215ENST00000447601 TMEM170BQ5T4T1 132 aa13.98□□□□□ -0.17
FAM3A-215ENST00000447601 PHLDA1Q8WV24 401 aaPredicted RBP13.98□□□□□ -0.17
FAM3A-215ENST00000447601 RPL36ALQ969Q0 106 aaKnown RBP13.98□□□□□ -0.17
FAM3A-215ENST00000447601 FN1P02751 2386 aaKnown RBP13.98□□□□□ -0.17
FAM3A-215ENST00000447601 TAL2Q16559 108 aa13.97□□□□□ -0.17
FAM3A-215ENST00000447601 TRGV2A0A075B6R0 118 aa13.97□□□□□ -0.17
FAM3A-215ENST00000447601 IGHV3-38A0A0C4DH36 116 aa13.97□□□□□ -0.17
FAM3A-215ENST00000447601 AMELXQ99217 191 aa13.97□□□□□ -0.17
FAM3A-215ENST00000447601 NACAE9PAV3 2078 aa13.96□□□□□ -0.17
FAM3A-215ENST00000447601 GCSHP23434 173 aa13.96□□□□□ -0.17
FAM3A-215ENST00000447601 UBE2D4Q9Y2X8 147 aa13.96□□□□□ -0.17
FAM3A-215ENST00000447601 C2CD3Q4AC94 2353 aa13.96□□□□□ -0.18
FAM3A-215ENST00000447601 GAGE12BA1L429 117 aa13.95□□□□□ -0.18
FAM3A-215ENST00000447601 GAGE7O76087 117 aa13.95□□□□□ -0.18
FAM3A-215ENST00000447601 GAGE12FP0CL80 117 aa13.95□□□□□ -0.18
FAM3A-215ENST00000447601 GAGE12GP0CL81 117 aa13.95□□□□□ -0.18
FAM3A-215ENST00000447601 GAGE12IP0CL82 117 aa13.95□□□□□ -0.18
FAM3A-215ENST00000447601 ZNF815PA8K554 130 aa13.94□□□□□ -0.18
FAM3A-215ENST00000447601 SLC25A29Q8N8R3 303 aa13.94□□□□□ -0.18
FAM3A-215ENST00000447601 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.94□□□□□ -0.18
FAM3A-215ENST00000447601 IGKV2-29A2NJV5 120 aaPredicted RBP13.94□□□□□ -0.18
FAM3A-215ENST00000447601 H3BRM9 83 aa13.94□□□□□ -0.18
FAM3A-215ENST00000447601 DAZ4Q86SG3 579 aaKnown RBP13.94□□□□□ -0.18
FAM3A-215ENST00000447601 CEND1Q8N111 149 aa13.94□□□□□ -0.18
FAM3A-215ENST00000447601 SPATA3Q8NHX4 192 aa13.94□□□□□ -0.18
FAM3A-215ENST00000447601 TM2D2Q9BX73 214 aa13.94□□□□□ -0.18
FAM3A-215ENST00000447601 DAZ3Q9NR90 486 aaKnown RBP13.94□□□□□ -0.18
FAM3A-215ENST00000447601 NIPBLQ6KC79 2804 aaeCLIP13.94□□□□□ -0.18
FAM3A-215ENST00000447601 HIVEP1P15822 2718 aa13.93□□□□□ -0.18
FAM3A-215ENST00000447601 FAM104AQ969W3 186 aa13.93□□□□□ -0.18
FAM3A-215ENST00000447601 VAMP3Q15836 100 aa13.92□□□□□ -0.18
FAM3A-215ENST00000447601 CEMP1Q6PRD7 247 aaPredicted RBP13.92□□□□□ -0.18
FAM3A-215ENST00000447601 A0A0J9YXV3 536 aa13.92□□□□□ -0.18
FAM3A-215ENST00000447601 PTTG1IPP53801 180 aa13.92□□□□□ -0.18
FAM3A-215ENST00000447601 FXYD2P54710 66 aa13.92□□□□□ -0.18
FAM3A-215ENST00000447601 HIST1H4GQ99525 98 aa13.92□□□□□ -0.18
FAM3A-215ENST00000447601 TRBV6-4A0A1B0GX49 114 aa13.91□□□□□ -0.18
FAM3A-215ENST00000447601 TMEM223A0PJW6 202 aa13.91□□□□□ -0.18
FAM3A-215ENST00000447601 ZNF22P17026 224 aaPredicted RBP13.91□□□□□ -0.18
FAM3A-215ENST00000447601 UBE2D3P61077 147 aa13.91□□□□□ -0.18
FAM3A-215ENST00000447601 UBE2D2P62837 147 aa13.91□□□□□ -0.18
FAM3A-215ENST00000447601 TIMM21Q9BVV7 248 aa13.91□□□□□ -0.18
FAM3A-215ENST00000447601 JMJD1CQ15652 2540 aa13.91□□□□□ -0.18
FAM3A-215ENST00000447601 MRPS36P82909 103 aaKnown RBP13.9□□□□□ -0.18
FAM3A-215ENST00000447601 UBE2V1Q13404 147 aa13.9□□□□□ -0.18
FAM3A-215ENST00000447601 SCGB1D4Q6XE38 83 aa13.9□□□□□ -0.18
FAM3A-215ENST00000447601 FLNBO75369 2602 aaKnown RBP13.9□□□□□ -0.18
FAM3A-215ENST00000447601 GAGE12JA6NER3 117 aa13.9□□□□□ -0.18
FAM3A-215ENST00000447601 GAGE4Q13068 117 aa13.9□□□□□ -0.18
FAM3A-215ENST00000447601 GAGE5Q13069 117 aa13.9□□□□□ -0.18
FAM3A-215ENST00000447601 GAGE13Q4V321 117 aa13.9□□□□□ -0.18
FAM3A-215ENST00000447601 TRGV4A0A0C4DH28 118 aa13.89□□□□□ -0.19
FAM3A-215ENST00000447601 SMIM13P0DJ93 91 aa13.89□□□□□ -0.19
FAM3A-215ENST00000447601 SMIM9A6NGZ8 99 aa13.88□□□□□ -0.19
FAM3A-215ENST00000447601 C9orf118A6NHY6 69 aa13.88□□□□□ -0.19
FAM3A-215ENST00000447601 J3QQQ9 107 aa13.88□□□□□ -0.19
FAM3A-215ENST00000447601 LEPROTO15243 131 aa13.88□□□□□ -0.19
FAM3A-215ENST00000447601 LGALS3P17931 250 aaKnown RBP13.88□□□□□ -0.19
FAM3A-215ENST00000447601 Q6ZUT4 128 aa13.88□□□□□ -0.19
FAM3A-215ENST00000447601 DGAT2L7PQ6IED9 249 aa13.87□□□□□ -0.19
FAM3A-215ENST00000447601 KIR2DL5BQ8NHK3 375 aa13.87□□□□□ -0.19
FAM3A-215ENST00000447601 TINCRA0A1B0GVN0 87 aa13.87□□□□□ -0.19
FAM3A-215ENST00000447601 K7EP13 123 aa13.87□□□□□ -0.19
FAM3A-215ENST00000447601 TSPEAR-AS2P59090 65 aa13.87□□□□□ -0.19
FAM3A-215ENST00000447601 SMAGPQ0VAQ4 97 aa13.87□□□□□ -0.19
FAM3A-215ENST00000447601 RNASE13Q5GAN3 156 aaKnown RBP13.87□□□□□ -0.19
FAM3A-215ENST00000447601 WFDC9Q8NEX5 89 aa13.87□□□□□ -0.19
FAM3A-215ENST00000447601 GTSF1LQ9H1H1 148 aa13.86□□□□□ -0.19
FAM3A-215ENST00000447601 PLEKHB2Q96CS7 222 aa13.85□□□□□ -0.19
FAM3A-215ENST00000447601 X6R8D5 127 aa13.85□□□□□ -0.19
FAM3A-215ENST00000447601 CCL25O15444 150 aa13.85□□□□□ -0.19
FAM3A-215ENST00000447601 APOC4P55056 127 aa13.85□□□□□ -0.19
FAM3A-215ENST00000447601 NTM-AS1Q6ZSK4 140 aa13.85□□□□□ -0.19
FAM3A-215ENST00000447601 RAB37Q96AX2 223 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms