RNA–Protein interactions for RNA: ENST00000447376.1

SF3A1-204, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 5

Gene SF3A1, Length 418 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-204ENST00000447376 COX11Q9Y6N1 276 aa11.03□□□□□ -0.64
SF3A1-204ENST00000447376 IGHV1-24A0A0C4DH33 117 aa11.02□□□□□ -0.65
SF3A1-204ENST00000447376 TRBV6-5A0A0K0K1A5 114 aa11.02□□□□□ -0.65
SF3A1-204ENST00000447376 CKS2P33552 79 aa11.02□□□□□ -0.65
SF3A1-204ENST00000447376 COTL1Q14019 142 aa11.02□□□□□ -0.65
SF3A1-204ENST00000447376 MRPL51Q4U2R6 128 aaKnown RBP11.02□□□□□ -0.65
SF3A1-204ENST00000447376 SDHAF1A6NFY7 115 aa11.01□□□□□ -0.65
SF3A1-204ENST00000447376 CRPP02741 224 aa11.01□□□□□ -0.65
SF3A1-204ENST00000447376 PPBPP02775 128 aa11.01□□□□□ -0.65
SF3A1-204ENST00000447376 I3L3M4 83 aa11□□□□□ -0.65
SF3A1-204ENST00000447376 NCR2O95944 276 aa11□□□□□ -0.65
SF3A1-204ENST00000447376 PMCHP20382 165 aa11□□□□□ -0.65
SF3A1-204ENST00000447376 IQCJQ1A5X6 159 aa11□□□□□ -0.65
SF3A1-204ENST00000447376 PGPEP1Q9NXJ5 209 aa11□□□□□ -0.65
SF3A1-204ENST00000447376 KLK12Q9UKR0 248 aa11□□□□□ -0.65
SF3A1-204ENST00000447376 A0A087WTM6 91 aa10.99□□□□□ -0.65
SF3A1-204ENST00000447376 UBE2L6O14933 153 aa10.99□□□□□ -0.65
SF3A1-204ENST00000447376 Q0VG73 95 aa10.99□□□□□ -0.65
SF3A1-204ENST00000447376 NTM-AS1Q6ZSK4 140 aa10.99□□□□□ -0.65
SF3A1-204ENST00000447376 Q8N3U1 123 aa10.99□□□□□ -0.65
SF3A1-204ENST00000447376 TMEM243Q9BU79 118 aa10.99□□□□□ -0.65
SF3A1-204ENST00000447376 PKD1P98161 4303 aa10.98□□□□□ -0.65
SF3A1-204ENST00000447376 SMKR1H3BMG3 65 aa10.98□□□□□ -0.65
SF3A1-204ENST00000447376 ANGP03950 147 aaKnown RBP10.98□□□□□ -0.65
SF3A1-204ENST00000447376 AMTP48728 403 aa10.98□□□□□ -0.65
SF3A1-204ENST00000447376 CDPF1Q6NVV7 123 aa10.98□□□□□ -0.65
SF3A1-204ENST00000447376 UBE2WQ96B02 151 aa10.98□□□□□ -0.65
SF3A1-204ENST00000447376 TMEM70Q9BUB7 260 aa10.98□□□□□ -0.65
SF3A1-204ENST00000447376 IGKV2D-24A0A075B6R9 120 aa10.97□□□□□ -0.65
SF3A1-204ENST00000447376 VCYO14598 125 aa10.97□□□□□ -0.65
SF3A1-204ENST00000447376 GAS8-AS1O95177 125 aa10.97□□□□□ -0.65
SF3A1-204ENST00000447376 RPS10P46783 165 aaKnown RBP10.97□□□□□ -0.65
SF3A1-204ENST00000447376 SUMO2P61956 95 aaKnown RBP10.97□□□□□ -0.65
SF3A1-204ENST00000447376 SLC7A5P1Q8MH63 180 aa10.97□□□□□ -0.65
SF3A1-204ENST00000447376 ORMDL3Q8N138 153 aa10.97□□□□□ -0.65
SF3A1-204ENST00000447376 C20orf78Q9BR46 151 aa10.97□□□□□ -0.65
SF3A1-204ENST00000447376 D6R8Y8 96 aa10.96□□□□□ -0.65
SF3A1-204ENST00000447376 PHOX2AO14813 284 aa10.96□□□□□ -0.65
SF3A1-204ENST00000447376 APCSP02743 223 aa10.96□□□□□ -0.65
SF3A1-204ENST00000447376 GAGE6Q13070 117 aa10.96□□□□□ -0.65
SF3A1-204ENST00000447376 COX19Q49B96 90 aa10.96□□□□□ -0.65
SF3A1-204ENST00000447376 MPV17L2Q567V2 206 aa10.96□□□□□ -0.65
SF3A1-204ENST00000447376 NRACQ8N912 160 aa10.96□□□□□ -0.65
SF3A1-204ENST00000447376 TRBV24-1A0A075B6N3 115 aa10.95□□□□□ -0.66
SF3A1-204ENST00000447376 TRBV27A0A0K0K1C4 114 aa10.95□□□□□ -0.66
SF3A1-204ENST00000447376 TNFRSF6BO95407 300 aa10.95□□□□□ -0.66
SF3A1-204ENST00000447376 POLR2KP53803 58 aaKnown RBP10.95□□□□□ -0.66
SF3A1-204ENST00000447376 TMEM136Q6ZRR5 245 aa10.95□□□□□ -0.66
SF3A1-204ENST00000447376 KIR2DL4Q99706 377 aa10.95□□□□□ -0.66
SF3A1-204ENST00000447376 C1orf43Q9BWL3 253 aa10.95□□□□□ -0.66
SF3A1-204ENST00000447376 PKHD1P08F94 4074 aa10.95□□□□□ -0.66
SF3A1-204ENST00000447376 TCAPO15273 167 aa10.94□□□□□ -0.66
SF3A1-204ENST00000447376 FCER1GP30273 86 aa10.94□□□□□ -0.66
SF3A1-204ENST00000447376 KRTAP10-2P60368 255 aa10.94□□□□□ -0.66
SF3A1-204ENST00000447376 ATRAIDQ6UW56 229 aa10.94□□□□□ -0.66
SF3A1-204ENST00000447376 DEFB104AQ8WTQ1 72 aa10.94□□□□□ -0.66
SF3A1-204ENST00000447376 PRELID3AQ96N28 172 aa10.94□□□□□ -0.66
SF3A1-204ENST00000447376 LAMTOR2Q9Y2Q5 125 aa10.94□□□□□ -0.66
SF3A1-204ENST00000447376 H7C423 109 aa10.93□□□□□ -0.66
SF3A1-204ENST00000447376 HLA-DQA1P01909 254 aa10.93□□□□□ -0.66
SF3A1-204ENST00000447376 RPL32P62910 135 aaKnown RBP10.93□□□□□ -0.66
SF3A1-204ENST00000447376 NTN5Q8WTR8 489 aaPredicted RBP10.93□□□□□ -0.66
SF3A1-204ENST00000447376 RBX1P62877 108 aa10.92□□□□□ -0.66
SF3A1-204ENST00000447376 MIAQ16674 131 aa10.92□□□□□ -0.66
SF3A1-204ENST00000447376 Q8N976 141 aa10.92□□□□□ -0.66
SF3A1-204ENST00000447376 GNB1LQ9BYB4 327 aa10.92□□□□□ -0.66
SF3A1-204ENST00000447376 A0A1B0GUV1 79 aa10.91□□□□□ -0.66
SF3A1-204ENST00000447376 TSHBP01222 138 aa10.91□□□□□ -0.66
SF3A1-204ENST00000447376 NPYP01303 97 aa10.91□□□□□ -0.66
SF3A1-204ENST00000447376 MT-ND6P03923 174 aa10.91□□□□□ -0.66
SF3A1-204ENST00000447376 SMAGPQ0VAQ4 97 aa10.91□□□□□ -0.66
SF3A1-204ENST00000447376 AMMECR1LQ6DCA0 310 aa10.91□□□□□ -0.66
SF3A1-204ENST00000447376 IGLV5-52A0A0A0MRZ9 124 aa10.9□□□□□ -0.66
SF3A1-204ENST00000447376 LRCOL1A6NCL2 159 aa10.9□□□□□ -0.66
SF3A1-204ENST00000447376 Q8N814 137 aa10.9□□□□□ -0.66
SF3A1-204ENST00000447376 SMIM2Q9BVW6 85 aa10.9□□□□□ -0.66
SF3A1-204ENST00000447376 LINC00269Q8N2A0 174 aa10.89□□□□□ -0.67
SF3A1-204ENST00000447376 MAP1LC3AQ9H492 121 aa10.89□□□□□ -0.67
SF3A1-204ENST00000447376 DNAH11Q96DT5 4516 aa10.88□□□□□ -0.67
SF3A1-204ENST00000447376 CDK2AP2O75956 126 aa10.88□□□□□ -0.67
SF3A1-204ENST00000447376 ESDP10768 282 aa10.88□□□□□ -0.67
SF3A1-204ENST00000447376 ZNF25P17030 456 aaPredicted RBP10.88□□□□□ -0.67
SF3A1-204ENST00000447376 RAB5AP20339 215 aa10.88□□□□□ -0.67
SF3A1-204ENST00000447376 REG3AQ06141 175 aa10.88□□□□□ -0.67
SF3A1-204ENST00000447376 C14orf177Q52M58 125 aa10.88□□□□□ -0.67
SF3A1-204ENST00000447376 RNASEKQ6P5S7 137 aaKnown RBP10.88□□□□□ -0.67
SF3A1-204ENST00000447376 ENHOQ6UWT2 76 aa10.88□□□□□ -0.67
SF3A1-204ENST00000447376 TMEM18Q96B42 140 aa10.88□□□□□ -0.67
SF3A1-204ENST00000447376 TMEM101Q96IK0 257 aa10.88□□□□□ -0.67
SF3A1-204ENST00000447376 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.87□□□□□ -0.67
SF3A1-204ENST00000447376 IGKV2-29A2NJV5 120 aaPredicted RBP10.87□□□□□ -0.67
SF3A1-204ENST00000447376 GCSHP23434 173 aa10.87□□□□□ -0.67
SF3A1-204ENST00000447376 CLPSL2Q6UWE3 100 aa10.87□□□□□ -0.67
SF3A1-204ENST00000447376 BAALCQ8WXS3 180 aa10.87□□□□□ -0.67
SF3A1-204ENST00000447376 SMCO4Q9NRQ5 59 aa10.87□□□□□ -0.67
SF3A1-204ENST00000447376 TGIF2-C20orf24A0A0A6YYL0 155 aa10.86□□□□□ -0.67
SF3A1-204ENST00000447376 TRAV8-4A0A0B4J246 113 aa10.86□□□□□ -0.67
SF3A1-204ENST00000447376 PRSS47A8MTI9 375 aa10.86□□□□□ -0.67
SF3A1-204ENST00000447376 LECT2O14960 151 aa10.86□□□□□ -0.67
SF3A1-204ENST00000447376 FGF6P10767 208 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms