RNA–Protein interactions for RNA: ENST00000446852.5

SMC6-206, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 1 (best)

Gene SMC6, Length 2,460 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-206ENST00000446852 TRAV8-6A0A0B4J262 113 aa12.51□□□□□ -0.41
SMC6-206ENST00000446852 ZNF25P17030 456 aaPredicted RBP12.5□□□□□ -0.41
SMC6-206ENST00000446852 INSL3P51460 131 aa12.5□□□□□ -0.41
SMC6-206ENST00000446852 DNAJC30Q96LL9 226 aa12.5□□□□□ -0.41
SMC6-206ENST00000446852 C9orf66Q5T8R8 295 aa12.5□□□□□ -0.41
SMC6-206ENST00000446852 TRBV25-1A0A075B6N4 114 aa12.49□□□□□ -0.41
SMC6-206ENST00000446852 IGHV3-38A0A0C4DH36 116 aa12.49□□□□□ -0.41
SMC6-206ENST00000446852 PHLDA1Q8WV24 401 aaPredicted RBP12.49□□□□□ -0.41
SMC6-206ENST00000446852 IGLV4-3A0A075B6K6 122 aa12.49□□□□□ -0.41
SMC6-206ENST00000446852 TRAV4A0A0B4J268 109 aa12.49□□□□□ -0.41
SMC6-206ENST00000446852 RRN3P1Q2M238 152 aa12.49□□□□□ -0.41
SMC6-206ENST00000446852 FAM104AQ969W3 186 aa12.49□□□□□ -0.41
SMC6-206ENST00000446852 CHCHD7Q9BUK0 85 aa12.49□□□□□ -0.41
SMC6-206ENST00000446852 NBEAL2Q6ZNJ1 2754 aa12.49□□□□□ -0.41
SMC6-206ENST00000446852 HSD52Q0P140 79 aa12.48□□□□□ -0.41
SMC6-206ENST00000446852 LINC00469Q8N7U9 141 aa12.48□□□□□ -0.41
SMC6-206ENST00000446852 ZNRF2Q8NHG8 242 aa12.48□□□□□ -0.41
SMC6-206ENST00000446852 HIGD1BQ9P298 99 aa12.48□□□□□ -0.41
SMC6-206ENST00000446852 ZMAT5Q9UDW3 170 aaKnown RBP12.48□□□□□ -0.41
SMC6-206ENST00000446852 E9PLD3 99 aa12.47□□□□□ -0.41
SMC6-206ENST00000446852 CEMP1Q6PRD7 247 aaPredicted RBP12.47□□□□□ -0.41
SMC6-206ENST00000446852 OR11H2Q8NH07 326 aa12.47□□□□□ -0.41
SMC6-206ENST00000446852 CHAC1Q9BUX1 264 aa12.47□□□□□ -0.41
SMC6-206ENST00000446852 PAPPA-AS1Q5QFB9 102 aa12.46□□□□□ -0.41
SMC6-206ENST00000446852 PRADC1Q9BSG0 188 aa12.46□□□□□ -0.41
SMC6-206ENST00000446852 PYGO1Q9Y3Y4 419 aa12.46□□□□□ -0.41
SMC6-206ENST00000446852 COX11Q9Y6N1 276 aa12.46□□□□□ -0.41
SMC6-206ENST00000446852 GAGE12BA1L429 117 aa12.46□□□□□ -0.42
SMC6-206ENST00000446852 K7EQD1 137 aa12.46□□□□□ -0.42
SMC6-206ENST00000446852 TAX1BP3O14907 124 aa12.46□□□□□ -0.42
SMC6-206ENST00000446852 GAGE7O76087 117 aa12.46□□□□□ -0.42
SMC6-206ENST00000446852 GAGE12FP0CL80 117 aa12.46□□□□□ -0.42
SMC6-206ENST00000446852 GAGE12GP0CL81 117 aa12.46□□□□□ -0.42
SMC6-206ENST00000446852 GAGE12IP0CL82 117 aa12.46□□□□□ -0.42
SMC6-206ENST00000446852 OVOL2Q9BRP0 275 aa12.46□□□□□ -0.42
SMC6-206ENST00000446852 SLC25A29Q8N8R3 303 aa12.45□□□□□ -0.42
SMC6-206ENST00000446852 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.45□□□□□ -0.42
SMC6-206ENST00000446852 IGKV2-29A2NJV5 120 aaPredicted RBP12.45□□□□□ -0.42
SMC6-206ENST00000446852 COTL1Q14019 142 aa12.45□□□□□ -0.42
SMC6-206ENST00000446852 ORAOV1Q8WV07 137 aa12.45□□□□□ -0.42
SMC6-206ENST00000446852 TRBV7-3A0A075B6L6 115 aa12.44□□□□□ -0.42
SMC6-206ENST00000446852 SEC11AP67812 179 aa12.44□□□□□ -0.42
SMC6-206ENST00000446852 TRGV2A0A075B6R0 118 aa12.44□□□□□ -0.42
SMC6-206ENST00000446852 NFE4Q86UQ8 179 aa12.44□□□□□ -0.42
SMC6-206ENST00000446852 VCX2Q9H322 139 aa12.44□□□□□ -0.42
SMC6-206ENST00000446852 UBE2D4Q9Y2X8 147 aa12.44□□□□□ -0.42
SMC6-206ENST00000446852 TRBV10-1A0A0K0K1A3 114 aa12.43□□□□□ -0.42
SMC6-206ENST00000446852 TMEM170BQ5T4T1 132 aa12.43□□□□□ -0.42
SMC6-206ENST00000446852 AMELXQ99217 191 aa12.43□□□□□ -0.42
SMC6-206ENST00000446852 MYMXA0A1B0GTQ4 84 aa12.42□□□□□ -0.42
SMC6-206ENST00000446852 RNASE13Q5GAN3 156 aaKnown RBP12.42□□□□□ -0.42
SMC6-206ENST00000446852 A0A0J9YXV3 536 aa12.41□□□□□ -0.42
SMC6-206ENST00000446852 RPL36AP83881 106 aaKnown RBP12.41□□□□□ -0.42
SMC6-206ENST00000446852 RPL36ALQ969Q0 106 aaKnown RBP12.41□□□□□ -0.42
SMC6-206ENST00000446852 K7EP13 123 aa12.4□□□□□ -0.42
SMC6-206ENST00000446852 SPANXA1Q9NS26 97 aa12.4□□□□□ -0.42
SMC6-206ENST00000446852 GAGE1Q13065 139 aa12.4□□□□□ -0.42
SMC6-206ENST00000446852 GAGE12JA6NER3 117 aa12.39□□□□□ -0.43
SMC6-206ENST00000446852 NPSP0C0P6 89 aa12.39□□□□□ -0.43
SMC6-206ENST00000446852 GCSHP23434 173 aa12.39□□□□□ -0.43
SMC6-206ENST00000446852 TSPEAR-AS2P59090 65 aa12.39□□□□□ -0.43
SMC6-206ENST00000446852 UBE2D3P61077 147 aa12.39□□□□□ -0.43
SMC6-206ENST00000446852 HERVK_113P61574 105 aa12.39□□□□□ -0.43
SMC6-206ENST00000446852 UBE2D2P62837 147 aa12.39□□□□□ -0.43
SMC6-206ENST00000446852 GAGE4Q13068 117 aa12.39□□□□□ -0.43
SMC6-206ENST00000446852 GAGE5Q13069 117 aa12.39□□□□□ -0.43
SMC6-206ENST00000446852 GAGE13Q4V321 117 aa12.39□□□□□ -0.43
SMC6-206ENST00000446852 X6R8D5 127 aa12.39□□□□□ -0.43
SMC6-206ENST00000446852 CRYBA4P53673 196 aa12.39□□□□□ -0.43
SMC6-206ENST00000446852 FXYD2P54710 66 aa12.39□□□□□ -0.43
SMC6-206ENST00000446852 Q6ZUT4 128 aa12.39□□□□□ -0.43
SMC6-206ENST00000446852 WFDC9Q8NEX5 89 aa12.39□□□□□ -0.43
SMC6-206ENST00000446852 ZNF815PA8K554 130 aa12.38□□□□□ -0.43
SMC6-206ENST00000446852 ZNF22P17026 224 aaPredicted RBP12.38□□□□□ -0.43
SMC6-206ENST00000446852 NTM-AS1Q6ZSK4 140 aa12.38□□□□□ -0.43
SMC6-206ENST00000446852 LOC100131303A0A0U1RQF7 123 aa12.38□□□□□ -0.43
SMC6-206ENST00000446852 A6NDN8 102 aa12.38□□□□□ -0.43
SMC6-206ENST00000446852 DAZ4Q86SG3 579 aaKnown RBP12.37□□□□□ -0.43
SMC6-206ENST00000446852 DAZ3Q9NR90 486 aaKnown RBP12.37□□□□□ -0.43
SMC6-206ENST00000446852 FBN1P35555 2871 aaKnown RBP12.37□□□□□ -0.43
SMC6-206ENST00000446852 TMEM223A0PJW6 202 aa12.37□□□□□ -0.43
SMC6-206ENST00000446852 PLEKHB2Q96CS7 222 aa12.37□□□□□ -0.43
SMC6-206ENST00000446852 TRBV6-4A0A1B0GX49 114 aa12.36□□□□□ -0.43
SMC6-206ENST00000446852 MRPS36P82909 103 aaKnown RBP12.36□□□□□ -0.43
SMC6-206ENST00000446852 FHL2Q14192 279 aa12.36□□□□□ -0.43
SMC6-206ENST00000446852 CEND1Q8N111 149 aa12.36□□□□□ -0.43
SMC6-206ENST00000446852 TRGV4A0A0C4DH28 118 aa12.36□□□□□ -0.43
SMC6-206ENST00000446852 CIDEAO60543 219 aa12.36□□□□□ -0.43
SMC6-206ENST00000446852 LINC00694P0DN24 101 aa12.36□□□□□ -0.43
SMC6-206ENST00000446852 TM2D2Q9BX73 214 aa12.36□□□□□ -0.43
SMC6-206ENST00000446852 STAB1Q9NY15 2570 aa12.35□□□□□ -0.43
SMC6-206ENST00000446852 DEFB130BP0DP73 79 aa12.35□□□□□ -0.43
SMC6-206ENST00000446852 DEFB130AP0DP74 79 aa12.35□□□□□ -0.43
SMC6-206ENST00000446852 LINC00612Q8N6U2 182 aa12.35□□□□□ -0.43
SMC6-206ENST00000446852 KIR2DL5BQ8NHK3 375 aa12.35□□□□□ -0.43
SMC6-206ENST00000446852 WIPF1O43516 503 aa12.34□□□□□ -0.43
SMC6-206ENST00000446852 DEFB135Q30KP9 77 aa12.34□□□□□ -0.43
SMC6-206ENST00000446852 KRTAP24-1Q3LI83 254 aa12.34□□□□□ -0.43
SMC6-206ENST00000446852 BAHCC1Q9P281 2608 aa12.34□□□□□ -0.43
SMC6-206ENST00000446852 TAL2Q16559 108 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms