RNA–Protein interactions for RNA: ENST00000446231.6

SMG1-202, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG1, Length 16,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-202ENST00000446231 LECT2O14960 151 aa5.99□□□□□ -1.45
SMG1-202ENST00000446231 MDFICQ9P1T7 246 aa5.99□□□□□ -1.45
SMG1-202ENST00000446231 STHQ8IWL8 128 aa5.99□□□□□ -1.45
SMG1-202ENST00000446231 H3BQ85 93 aa5.99□□□□□ -1.45
SMG1-202ENST00000446231 FUSP35637 526 aaKnown RBP eCLIP5.99□□□□□ -1.45
SMG1-202ENST00000446231 C20orf197Q8N268 126 aa5.99□□□□□ -1.45
SMG1-202ENST00000446231 ENHOQ6UWT2 76 aa5.99□□□□□ -1.45
SMG1-202ENST00000446231 IGHV7-81A0A0B4J1V7 117 aa5.99□□□□□ -1.45
SMG1-202ENST00000446231 C20orf173Q96LM9 149 aa5.99□□□□□ -1.45
SMG1-202ENST00000446231 NDUFA1O15239 70 aa5.99□□□□□ -1.45
SMG1-202ENST00000446231 IGF1P05019 195 aa5.99□□□□□ -1.45
SMG1-202ENST00000446231 CMC4P56277 68 aaPredicted RBP5.99□□□□□ -1.45
SMG1-202ENST00000446231 ODF3Q96PU9 254 aa5.99□□□□□ -1.45
SMG1-202ENST00000446231 CCL19Q99731 98 aa5.99□□□□□ -1.45
SMG1-202ENST00000446231 NCR3O14931 201 aa5.99□□□□□ -1.45
SMG1-202ENST00000446231 RPS28P62857 69 aaKnown RBP5.99□□□□□ -1.45
SMG1-202ENST00000446231 DEFB1P60022 68 aa5.98□□□□□ -1.45
SMG1-202ENST00000446231 TIRAPP58753 221 aa5.98□□□□□ -1.45
SMG1-202ENST00000446231 RPL18AQ02543 176 aaKnown RBP5.98□□□□□ -1.45
SMG1-202ENST00000446231 HELZ2Q9BYK8 2649 aaKnown RBP5.98□□□□□ -1.45
SMG1-202ENST00000446231 LST1O00453 97 aa5.98□□□□□ -1.45
SMG1-202ENST00000446231 UBE2E2Q96LR5 201 aa5.98□□□□□ -1.45
SMG1-202ENST00000446231 CNFNQ9BYD5 112 aa5.98□□□□□ -1.45
SMG1-202ENST00000446231 SMIM26A0A096LP01 95 aa5.98□□□□□ -1.45
SMG1-202ENST00000446231 C1orf195Q5TG92 126 aa5.98□□□□□ -1.45
SMG1-202ENST00000446231 ZNRF2Q8NHG8 242 aa5.98□□□□□ -1.45
SMG1-202ENST00000446231 A0A096LNJ9 63 aa5.97□□□□□ -1.45
SMG1-202ENST00000446231 TIMM17BO60830 172 aa5.97□□□□□ -1.45
SMG1-202ENST00000446231 LINC01546A6NGU7 62 aa5.97□□□□□ -1.45
SMG1-202ENST00000446231 MRPS36P82909 103 aaKnown RBP5.97□□□□□ -1.45
SMG1-202ENST00000446231 SAA4P35542 130 aa5.97□□□□□ -1.45
SMG1-202ENST00000446231 DEFB131AP59861 70 aa5.97□□□□□ -1.45
SMG1-202ENST00000446231 IGHV4-4A0A075B6R2 117 aa5.97□□□□□ -1.45
SMG1-202ENST00000446231 RPL35AP18077 110 aaKnown RBP5.97□□□□□ -1.45
SMG1-202ENST00000446231 PIK3CD-AS1Q5SR53 167 aa5.97□□□□□ -1.45
SMG1-202ENST00000446231 LINC00308Q8TCZ7 52 aa5.97□□□□□ -1.45
SMG1-202ENST00000446231 HTN3P15516 51 aa5.97□□□□□ -1.45
SMG1-202ENST00000446231 XCL2Q9UBD3 114 aa5.97□□□□□ -1.45
SMG1-202ENST00000446231 MSMPQ1L6U9 139 aa5.96□□□□□ -1.45
SMG1-202ENST00000446231 FSTL3O95633 263 aa5.96□□□□□ -1.45
SMG1-202ENST00000446231 M0QY20 66 aa5.96□□□□□ -1.46
SMG1-202ENST00000446231 SERP1Q9Y6X1 66 aa5.96□□□□□ -1.46
SMG1-202ENST00000446231 HIST2H2BCQ6DN03 193 aa5.96□□□□□ -1.46
SMG1-202ENST00000446231 HIST2H2BDQ6DRA6 164 aa5.96□□□□□ -1.46
SMG1-202ENST00000446231 TMEM256-PLSCR3K7ERE1 68 aa5.96□□□□□ -1.46
SMG1-202ENST00000446231 CFHR3Q02985 330 aa5.96□□□□□ -1.46
SMG1-202ENST00000446231 PF4P02776 101 aa5.96□□□□□ -1.46
SMG1-202ENST00000446231 NSUN5P1Q3KNT7 163 aa5.95□□□□□ -1.46
SMG1-202ENST00000446231 FAM222AQ5U5X8 452 aa5.95□□□□□ -1.46
SMG1-202ENST00000446231 XCL1P47992 114 aa5.95□□□□□ -1.46
SMG1-202ENST00000446231 Q6JHZ5 121 aa5.95□□□□□ -1.46
SMG1-202ENST00000446231 CEMP1Q6PRD7 247 aaPredicted RBP5.95□□□□□ -1.46
SMG1-202ENST00000446231 H3BUA1 57 aa5.95□□□□□ -1.46
SMG1-202ENST00000446231 F8WEM9 126 aa5.95□□□□□ -1.46
SMG1-202ENST00000446231 CTSZQ9UBR2 303 aa5.95□□□□□ -1.46
SMG1-202ENST00000446231 IGIPA6NJ69 53 aa5.95□□□□□ -1.46
SMG1-202ENST00000446231 CRIP2P52943 208 aaPredicted RBP5.95□□□□□ -1.46
SMG1-202ENST00000446231 TRBV7-7A0A0K0K1E9 115 aa5.95□□□□□ -1.46
SMG1-202ENST00000446231 DKK4Q9UBT3 224 aa5.95□□□□□ -1.46
SMG1-202ENST00000446231 MP68P56378 58 aa5.95□□□□□ -1.46
SMG1-202ENST00000446231 HOXB4P17483 251 aaPredicted RBP5.95□□□□□ -1.46
SMG1-202ENST00000446231 JMJD7-PLA2G4BH0Y9G9 81 aa5.95□□□□□ -1.46
SMG1-202ENST00000446231 SMAD5-AS1Q9Y6J3 95 aa5.95□□□□□ -1.46
SMG1-202ENST00000446231 COL4A6Q14031 1691 aa5.94□□□□□ -1.46
SMG1-202ENST00000446231 TRBV12-3P01733 135 aa5.94□□□□□ -1.46
SMG1-202ENST00000446231 UCNP55089 124 aa5.94□□□□□ -1.46
SMG1-202ENST00000446231 WFDC11Q8NEX6 87 aa5.94□□□□□ -1.46
SMG1-202ENST00000446231 UNC79Q9P2D8 2635 aa5.94□□□□□ -1.46
SMG1-202ENST00000446231 NDUFC1O43677 76 aa5.94□□□□□ -1.46
SMG1-202ENST00000446231 SMCPP49901 116 aaPredicted RBP5.94□□□□□ -1.46
SMG1-202ENST00000446231 FAM215AQ9Y5M1 114 aa5.94□□□□□ -1.46
SMG1-202ENST00000446231 SLPIP03973 132 aa5.94□□□□□ -1.46
SMG1-202ENST00000446231 ATP5EP56381 51 aaPredicted RBP5.94□□□□□ -1.46
SMG1-202ENST00000446231 BRD3OSQ6XYD6 125 aa5.94□□□□□ -1.46
SMG1-202ENST00000446231 ZFAND2AQ8N6M9 145 aa5.94□□□□□ -1.46
SMG1-202ENST00000446231 A0A0J9YX75 114 aa5.94□□□□□ -1.46
SMG1-202ENST00000446231 MPLKIPQ8TAP9 179 aa5.94□□□□□ -1.46
SMG1-202ENST00000446231 DEFB130BP0DP73 79 aa5.93□□□□□ -1.46
SMG1-202ENST00000446231 DEFB130AP0DP74 79 aa5.93□□□□□ -1.46
SMG1-202ENST00000446231 BRWD3Q6RI45 1802 aa5.93□□□□□ -1.46
SMG1-202ENST00000446231 ITPR3Q14573 2671 aa5.93□□□□□ -1.46
SMG1-202ENST00000446231 A0A1W2PRX2 142 aa5.93□□□□□ -1.46
SMG1-202ENST00000446231 TSHBP01222 138 aa5.93□□□□□ -1.46
SMG1-202ENST00000446231 RUSC1-AS1Q66K80 236 aa5.93□□□□□ -1.46
SMG1-202ENST00000446231 C5orf38Q86SI9 138 aa5.93□□□□□ -1.46
SMG1-202ENST00000446231 H3BUX3 64 aa5.93□□□□□ -1.46
SMG1-202ENST00000446231 C11orf21Q9P2W6 132 aa5.93□□□□□ -1.46
SMG1-202ENST00000446231 NREPQ16612 68 aa5.93□□□□□ -1.46
SMG1-202ENST00000446231 TSPEAR-AS2P59090 65 aa5.93□□□□□ -1.46
SMG1-202ENST00000446231 SPRY4Q9C004 299 aa5.92□□□□□ -1.46
SMG1-202ENST00000446231 IGHV4OR15-8A0A075B7B6 117 aa5.92□□□□□ -1.46
SMG1-202ENST00000446231 A0A087WW49 117 aa5.92□□□□□ -1.46
SMG1-202ENST00000446231 ADAMTSL4-AS1Q5T5F5 129 aa5.92□□□□□ -1.46
SMG1-202ENST00000446231 IGLV4-69A0A075B6H9 119 aa5.92□□□□□ -1.46
SMG1-202ENST00000446231 LINC00467Q9BRT7 94 aa5.92□□□□□ -1.46
SMG1-202ENST00000446231 TRAV25A0A0B4J276 109 aa5.92□□□□□ -1.46
SMG1-202ENST00000446231 STAB1Q9NY15 2570 aa5.92□□□□□ -1.46
SMG1-202ENST00000446231 MRPL55Q7Z7F7 128 aaKnown RBP5.92□□□□□ -1.46
SMG1-202ENST00000446231 TRBV27A0A0K0K1C4 114 aa5.92□□□□□ -1.46
SMG1-202ENST00000446231 CDKN2A-AS1Q9UH64 79 aa5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 103 ms