RNA–Protein interactions for RNA: ENST00000445902.2

VPS52-212, Transcript of VPS52, GARP complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS52, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-212ENST00000445902 TRBV7-7A0A0K0K1E9 115 aa10.27□□□□□ -0.77
VPS52-212ENST00000445902 SPINK13Q1W4C9 94 aa10.27□□□□□ -0.77
VPS52-212ENST00000445902 ZNF625Q96I27 306 aaPredicted RBP10.27□□□□□ -0.77
VPS52-212ENST00000445902 KLK5Q9Y337 293 aaPredicted RBP10.27□□□□□ -0.77
VPS52-212ENST00000445902 ABCA2Q9BZC7 2435 aa10.27□□□□□ -0.77
VPS52-212ENST00000445902 MRPL23Q16540 153 aaKnown RBP10.26□□□□□ -0.77
VPS52-212ENST00000445902 C9orf153Q5TBE3 101 aa10.26□□□□□ -0.77
VPS52-212ENST00000445902 C9orf85Q96MD7 179 aa10.26□□□□□ -0.77
VPS52-212ENST00000445902 FAM240AA0A1B0GVK7 77 aa10.26□□□□□ -0.77
VPS52-212ENST00000445902 SPANXDQ9BXN6 97 aa10.26□□□□□ -0.77
VPS52-212ENST00000445902 SPANXCQ9NY87 97 aa10.26□□□□□ -0.77
VPS52-212ENST00000445902 LOC107984640A0A0U1RRK4 108 aa10.26□□□□□ -0.77
VPS52-212ENST00000445902 C11orf71Q6IPW1 123 aa10.25□□□□□ -0.77
VPS52-212ENST00000445902 MOB4Q9Y3A3 225 aa10.25□□□□□ -0.77
VPS52-212ENST00000445902 KNCNA6PVL3 124 aa10.25□□□□□ -0.77
VPS52-212ENST00000445902 MRPS36P82909 103 aaKnown RBP10.25□□□□□ -0.77
VPS52-212ENST00000445902 VSIG2Q96IQ7 327 aa10.25□□□□□ -0.77
VPS52-212ENST00000445902 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.24□□□□□ -0.77
VPS52-212ENST00000445902 IGKV2-29A2NJV5 120 aaPredicted RBP10.24□□□□□ -0.77
VPS52-212ENST00000445902 PRM2P04554 102 aa10.24□□□□□ -0.77
VPS52-212ENST00000445902 C19orf54Q5BKX5 351 aa10.24□□□□□ -0.77
VPS52-212ENST00000445902 DEFB121Q5J5C9 76 aa10.24□□□□□ -0.77
VPS52-212ENST00000445902 TMEM126AQ9H061 195 aa10.24□□□□□ -0.77
VPS52-212ENST00000445902 CITED2Q99967 270 aaPredicted RBP10.23□□□□□ -0.77
VPS52-212ENST00000445902 DAZ1Q9NQZ3 744 aaKnown RBP10.23□□□□□ -0.77
VPS52-212ENST00000445902 YAE1D1Q9NRH1 226 aa10.23□□□□□ -0.77
VPS52-212ENST00000445902 CUBNO60494 3623 aa10.23□□□□□ -0.77
VPS52-212ENST00000445902 DCANP1Q8TF63 244 aa10.23□□□□□ -0.77
VPS52-212ENST00000445902 A0A1W2PPR1 153 aa10.22□□□□□ -0.77
VPS52-212ENST00000445902 CSPG4Q6UVK1 2322 aa10.22□□□□□ -0.77
VPS52-212ENST00000445902 IGHV1OR15-1A0A075B7D0 117 aa10.22□□□□□ -0.77
VPS52-212ENST00000445902 IGHV3-38A0A0C4DH36 116 aa10.22□□□□□ -0.77
VPS52-212ENST00000445902 BPESC1Q9GZL8 116 aa10.22□□□□□ -0.77
VPS52-212ENST00000445902 BLCAPP62952 87 aa10.21□□□□□ -0.77
VPS52-212ENST00000445902 SPANXA1Q9NS26 97 aa10.21□□□□□ -0.77
VPS52-212ENST00000445902 CSMD2Q7Z408 3487 aa10.21□□□□□ -0.77
VPS52-212ENST00000445902 Q8N2B8 174 aa10.21□□□□□ -0.78
VPS52-212ENST00000445902 RS1O15537 224 aa10.2□□□□□ -0.78
VPS52-212ENST00000445902 IGHG2P01859 326 aa10.2□□□□□ -0.78
VPS52-212ENST00000445902 CDKN2A-AS1Q9UH64 79 aa10.2□□□□□ -0.78
VPS52-212ENST00000445902 DAZ2Q13117 558 aaKnown RBP10.2□□□□□ -0.78
VPS52-212ENST00000445902 DAZ4Q86SG3 579 aaKnown RBP10.2□□□□□ -0.78
VPS52-212ENST00000445902 C3orf22Q8N5N4 141 aa10.2□□□□□ -0.78
VPS52-212ENST00000445902 DAZ3Q9NR90 486 aaKnown RBP10.2□□□□□ -0.78
VPS52-212ENST00000445902 NDUFA7O95182 113 aa10.2□□□□□ -0.78
VPS52-212ENST00000445902 HERVK_113P63121 156 aa10.2□□□□□ -0.78
VPS52-212ENST00000445902 PYGO1Q9Y3Y4 419 aa10.18□□□□□ -0.78
VPS52-212ENST00000445902 TINCRA0A1B0GVN0 87 aa10.18□□□□□ -0.78
VPS52-212ENST00000445902 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.18□□□□□ -0.78
VPS52-212ENST00000445902 C2CD3Q4AC94 2353 aa10.18□□□□□ -0.78
VPS52-212ENST00000445902 HIVEP3Q5T1R4 2406 aa10.18□□□□□ -0.78
VPS52-212ENST00000445902 LINC00467Q9BRT7 94 aa10.17□□□□□ -0.78
VPS52-212ENST00000445902 NOTCH3Q9UM47 2321 aa10.17□□□□□ -0.78
VPS52-212ENST00000445902 LMO4P61968 165 aa10.17□□□□□ -0.78
VPS52-212ENST00000445902 GAGE2AQ6NT46 116 aa10.17□□□□□ -0.78
VPS52-212ENST00000445902 Q6ZSN1 163 aa10.17□□□□□ -0.78
VPS52-212ENST00000445902 LINC00308Q8TCZ7 52 aa10.17□□□□□ -0.78
VPS52-212ENST00000445902 USMG5Q96IX5 58 aa10.17□□□□□ -0.78
VPS52-212ENST00000445902 Q9H8V8 135 aa10.17□□□□□ -0.78
VPS52-212ENST00000445902 SPG11Q96JI7 2443 aa10.17□□□□□ -0.78
VPS52-212ENST00000445902 IGF2RP11717 2491 aa10.17□□□□□ -0.78
VPS52-212ENST00000445902 UBE2D4Q9Y2X8 147 aa10.17□□□□□ -0.78
VPS52-212ENST00000445902 H3BUX3 64 aa10.16□□□□□ -0.78
VPS52-212ENST00000445902 BAALC-AS2P0C853 105 aa10.16□□□□□ -0.78
VPS52-212ENST00000445902 LINC00643Q86TS7 51 aa10.16□□□□□ -0.78
VPS52-212ENST00000445902 CSDC2Q9Y534 153 aaKnown RBP10.16□□□□□ -0.78
VPS52-212ENST00000445902 COX7A2LO14548 114 aa10.16□□□□□ -0.78
VPS52-212ENST00000445902 CHCHD7Q9BUK0 85 aa10.16□□□□□ -0.78
VPS52-212ENST00000445902 Q9HAA7 133 aa10.16□□□□□ -0.78
VPS52-212ENST00000445902 UQCRQO14949 82 aa10.15□□□□□ -0.78
VPS52-212ENST00000445902 ACYP1P07311 99 aa10.15□□□□□ -0.78
VPS52-212ENST00000445902 RBMY1A1P0DJD3 496 aaKnown RBP10.15□□□□□ -0.78
VPS52-212ENST00000445902 RBMY1CP0DJD4 496 aa10.15□□□□□ -0.78
VPS52-212ENST00000445902 HOXD3P31249 432 aaPredicted RBP10.15□□□□□ -0.78
VPS52-212ENST00000445902 ADORA2A-AS1P86434 159 aa10.15□□□□□ -0.78
VPS52-212ENST00000445902 COX6A2Q02221 97 aa10.15□□□□□ -0.78
VPS52-212ENST00000445902 RBMY1FQ15415 496 aaKnown RBP10.15□□□□□ -0.78
VPS52-212ENST00000445902 EDA2RQ9HAV5 297 aa10.15□□□□□ -0.78
VPS52-212ENST00000445902 SOSTDC1Q6X4U4 206 aa10.15□□□□□ -0.78
VPS52-212ENST00000445902 DNAJC30Q96LL9 226 aa10.15□□□□□ -0.78
VPS52-212ENST00000445902 FAM218AQ96MZ4 157 aa10.15□□□□□ -0.78
VPS52-212ENST00000445902 IMUPQ9GZP8 106 aa10.15□□□□□ -0.78
VPS52-212ENST00000445902 TIRAPP58753 221 aa10.14□□□□□ -0.79
VPS52-212ENST00000445902 FBXL19-AS1Q494R0 122 aa10.14□□□□□ -0.79
VPS52-212ENST00000445902 C10orf99Q6UWK7 81 aa10.14□□□□□ -0.79
VPS52-212ENST00000445902 NRGNQ92686 78 aa10.14□□□□□ -0.79
VPS52-212ENST00000445902 SYNJ2BPP57105 145 aa10.14□□□□□ -0.79
VPS52-212ENST00000445902 SNRPD3P62318 126 aaKnown RBP10.14□□□□□ -0.79
VPS52-212ENST00000445902 CIRBPQ14011 172 aaKnown RBP10.14□□□□□ -0.79
VPS52-212ENST00000445902 IGHV4-38-2P0DP08 117 aa10.14□□□□□ -0.79
VPS52-212ENST00000445902 ATP5J2P56134 94 aa10.14□□□□□ -0.79
VPS52-212ENST00000445902 NDUFA1O15239 70 aa10.13□□□□□ -0.79
VPS52-212ENST00000445902 LINC00526Q96FQ7 95 aa10.13□□□□□ -0.79
VPS52-212ENST00000445902 TRAV13-1A0A0B4J241 112 aa10.12□□□□□ -0.79
VPS52-212ENST00000445902 CYSTM1Q9H1C7 97 aa10.12□□□□□ -0.79
VPS52-212ENST00000445902 hADV29S1A0JD25 119 aa10.12□□□□□ -0.79
VPS52-212ENST00000445902 KLRB1Q12918 225 aa10.12□□□□□ -0.79
VPS52-212ENST00000445902 SDIM1Q6ZPB5 146 aa10.12□□□□□ -0.79
VPS52-212ENST00000445902 C22orf24Q9Y442 160 aa10.12□□□□□ -0.79
VPS52-212ENST00000445902 TIMM17BO60830 172 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms