RNA–Protein interactions for RNA: ENST00000445497.1

UBBP3-201, Transcript of ubiquitin B pseudogene 3, humanhuman

BASIC

Gene UBBP3, Length 241 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBBP3-201ENST00000445497 LITAFQ99732 161 aa1.79□□□□□ -2.12
UBBP3-201ENST00000445497 PRR15LQ9BU68 103 aa1.79□□□□□ -2.12
UBBP3-201ENST00000445497 HIGD2AQ9BW72 106 aa1.79□□□□□ -2.12
UBBP3-201ENST00000445497 LINC00846Q9NV44 126 aa1.79□□□□□ -2.12
UBBP3-201ENST00000445497 PSORS1C2Q9UIG4 136 aa1.79□□□□□ -2.12
UBBP3-201ENST00000445497 MINOS1-NBL1R4GNA1 71 aa1.79□□□□□ -2.12
UBBP3-201ENST00000445497 V9GYV3 84 aa1.79□□□□□ -2.12
UBBP3-201ENST00000445497 TULP4Q9NRJ4 1543 aa1.79□□□□□ -2.12
UBBP3-201ENST00000445497 ABCC8Q09428 1581 aa1.79□□□□□ -2.12
UBBP3-201ENST00000445497 PAPPAQ13219 1627 aa1.79□□□□□ -2.12
UBBP3-201ENST00000445497 PLXNA1Q9UIW2 1896 aa1.79□□□□□ -2.12
UBBP3-201ENST00000445497 PLXNB3Q9ULL4 1909 aa1.79□□□□□ -2.12
UBBP3-201ENST00000445497 DSCAMO60469 2012 aa1.79□□□□□ -2.12
UBBP3-201ENST00000445497 TANC2Q9HCD6 1990 aa1.78□□□□□ -2.12
UBBP3-201ENST00000445497 TANC1Q9C0D5 1861 aa1.78□□□□□ -2.12
UBBP3-201ENST00000445497 AFDNP55196 1824 aaKnown RBP1.78□□□□□ -2.12
UBBP3-201ENST00000445497 LOC285556D6RIA3 1793 aa1.78□□□□□ -2.12
UBBP3-201ENST00000445497 TJP1Q07157 1748 aa1.78□□□□□ -2.12
UBBP3-201ENST00000445497 PKD1L3Q7Z443 1732 aa1.78□□□□□ -2.12
UBBP3-201ENST00000445497 FAM208AQ9UK61 1670 aaKnown RBP1.78□□□□□ -2.12
UBBP3-201ENST00000445497 NUPR2A6NF83 97 aa1.78□□□□□ -2.12
UBBP3-201ENST00000445497 LINC01546A6NGU7 62 aa1.78□□□□□ -2.12
UBBP3-201ENST00000445497 F8VRH5 84 aa1.78□□□□□ -2.12
UBBP3-201ENST00000445497 S100A3P33764 101 aa1.78□□□□□ -2.12
UBBP3-201ENST00000445497 CNBPP62633 177 aaKnown RBP1.78□□□□□ -2.12
UBBP3-201ENST00000445497 PDE6HQ13956 83 aa1.78□□□□□ -2.12
UBBP3-201ENST00000445497 KRTAP19-4Q3LI73 84 aa1.78□□□□□ -2.12
UBBP3-201ENST00000445497 C10orf113Q5VZT2 155 aa1.78□□□□□ -2.12
UBBP3-201ENST00000445497 Q8N3U1 123 aa1.78□□□□□ -2.12
UBBP3-201ENST00000445497 LINC00167Q96N53 147 aa1.78□□□□□ -2.12
UBBP3-201ENST00000445497 LHFPL6Q9Y693 200 aa1.78□□□□□ -2.12
UBBP3-201ENST00000445497 LINC01558Q9Y6Z2 57 aa1.78□□□□□ -2.12
UBBP3-201ENST00000445497 NYNRINQ9P2P1 1898 aaKnown RBP1.77□□□□□ -2.13
UBBP3-201ENST00000445497 C3P01024 1663 aa1.77□□□□□ -2.13
UBBP3-201ENST00000445497 COL4A6Q14031 1691 aa1.77□□□□□ -2.13
UBBP3-201ENST00000445497 SLIT1O75093 1534 aa1.77□□□□□ -2.13
UBBP3-201ENST00000445497 GON4LQ3T8J9 2241 aa1.77□□□□□ -2.13
UBBP3-201ENST00000445497 IGLV2-18A0A075B6J9 118 aa1.77□□□□□ -2.13
UBBP3-201ENST00000445497 A0A096LNJ9 63 aa1.77□□□□□ -2.13
UBBP3-201ENST00000445497 TRBV6-6A0A0A6YYG2 114 aa1.77□□□□□ -2.13
UBBP3-201ENST00000445497 A0A0J9YX75 114 aa1.77□□□□□ -2.13
UBBP3-201ENST00000445497 JMJD7-PLA2G4BH0Y9G9 81 aa1.77□□□□□ -2.13
UBBP3-201ENST00000445497 K7EMI3 77 aa1.77□□□□□ -2.13
UBBP3-201ENST00000445497 UQCR11O14957 56 aa1.77□□□□□ -2.13
UBBP3-201ENST00000445497 MGPP08493 103 aa1.77□□□□□ -2.13
UBBP3-201ENST00000445497 GIG44P09565 113 aaPredicted RBP1.77□□□□□ -2.13
UBBP3-201ENST00000445497 CSAG1Q6PB30 78 aa1.77□□□□□ -2.13
UBBP3-201ENST00000445497 LYPD6Q86Y78 171 aa1.77□□□□□ -2.13
UBBP3-201ENST00000445497 TMEM263Q8WUH6 116 aaKnown RBP1.77□□□□□ -2.13
UBBP3-201ENST00000445497 OBSCN-AS1Q96MR7 158 aa1.77□□□□□ -2.13
UBBP3-201ENST00000445497 SNURFQ9Y675 71 aa1.77□□□□□ -2.13
UBBP3-201ENST00000445497 MICAL3Q7RTP6 2002 aa1.77□□□□□ -2.13
UBBP3-201ENST00000445497 ZFC3H1O60293 1989 aaKnown RBP1.77□□□□□ -2.13
UBBP3-201ENST00000445497 TRPM7Q96QT4 1865 aa1.77□□□□□ -2.13
UBBP3-201ENST00000445497 PLCH1Q4KWH8 1693 aa1.77□□□□□ -2.13
UBBP3-201ENST00000445497 GCC2Q8IWJ2 1684 aa1.77□□□□□ -2.13
UBBP3-201ENST00000445497 SAMD9LQ8IVG5 1584 aa1.76□□□□□ -2.13
UBBP3-201ENST00000445497 PCNX2A6NKB5 2137 aa1.76□□□□□ -2.13
UBBP3-201ENST00000445497 ARHGEF17Q96PE2 2063 aaPredicted RBP1.76□□□□□ -2.13
UBBP3-201ENST00000445497 PIKFYVEQ9Y2I7 2098 aa1.76□□□□□ -2.13
UBBP3-201ENST00000445497 PTPRDP23468 1912 aa1.76□□□□□ -2.13
UBBP3-201ENST00000445497 MYO5AQ9Y4I1 1855 aaKnown RBP1.76□□□□□ -2.13
UBBP3-201ENST00000445497 IGKV3D-7A0A0C4DH55 119 aa1.76□□□□□ -2.13
UBBP3-201ENST00000445497 FAM168BA1KXE4 195 aa1.76□□□□□ -2.13
UBBP3-201ENST00000445497 C10orf142B7Z368 130 aa1.76□□□□□ -2.13
UBBP3-201ENST00000445497 P0C880 135 aa1.76□□□□□ -2.13
UBBP3-201ENST00000445497 PDE6GP18545 87 aa1.76□□□□□ -2.13
UBBP3-201ENST00000445497 NREPQ16612 68 aa1.76□□□□□ -2.13
UBBP3-201ENST00000445497 KRTAP25-1Q3LHN0 102 aa1.76□□□□□ -2.13
UBBP3-201ENST00000445497 COX7B2Q8TF08 81 aa1.76□□□□□ -2.13
UBBP3-201ENST00000445497 PRR34Q9NV39 138 aa1.76□□□□□ -2.13
UBBP3-201ENST00000445497 NUMA1Q14980 2115 aa1.76□□□□□ -2.13
UBBP3-201ENST00000445497 LRP5O75197 1615 aa1.76□□□□□ -2.13
UBBP3-201ENST00000445497 POLR2AP24928 1970 aaKnown RBP1.76□□□□□ -2.13
UBBP3-201ENST00000445497 EXPH5Q8NEV8 1989 aa1.76□□□□□ -2.13
UBBP3-201ENST00000445497 FMN2Q9NZ56 1722 aa1.75□□□□□ -2.13
UBBP3-201ENST00000445497 TRPM6Q9BX84 2022 aa1.75□□□□□ -2.13
UBBP3-201ENST00000445497 A0A087WVE0 104 aa1.75□□□□□ -2.13
UBBP3-201ENST00000445497 LCE6AA0A183 80 aa1.75□□□□□ -2.13
UBBP3-201ENST00000445497 CLPSL1A2RUU4 121 aa1.75□□□□□ -2.13
UBBP3-201ENST00000445497 WISP3O95389 354 aaPredicted RBP1.75□□□□□ -2.13
UBBP3-201ENST00000445497 TFF1P04155 84 aa1.75□□□□□ -2.13
UBBP3-201ENST00000445497 CCL3L1P16619 93 aa1.75□□□□□ -2.13
UBBP3-201ENST00000445497 SPINT4Q6UDR6 99 aa1.75□□□□□ -2.13
UBBP3-201ENST00000445497 LINC00208Q96KT6 92 aa1.75□□□□□ -2.13
UBBP3-201ENST00000445497 KLK12Q9UKR0 248 aa1.75□□□□□ -2.13
UBBP3-201ENST00000445497 LRRC37A3O60309 1634 aa1.75□□□□□ -2.13
UBBP3-201ENST00000445497 NHSL1Q5SYE7 1610 aa1.75□□□□□ -2.13
UBBP3-201ENST00000445497 ARHGAP21Q5T5U3 1957 aa1.75□□□□□ -2.13
UBBP3-201ENST00000445497 PLXNA3P51805 1871 aa1.75□□□□□ -2.13
UBBP3-201ENST00000445497 SLX4Q8IY92 1834 aa1.75□□□□□ -2.13
UBBP3-201ENST00000445497 LAMB2P55268 1798 aa1.75□□□□□ -2.13
UBBP3-201ENST00000445497 NUP188Q5SRE5 1749 aa1.74□□□□□ -2.13
UBBP3-201ENST00000445497 PCNX3Q9H6A9 2034 aa1.74□□□□□ -2.13
UBBP3-201ENST00000445497 PHRF1Q9P1Y6 1649 aaKnown RBP1.74□□□□□ -2.13
UBBP3-201ENST00000445497 MED13Q9UHV7 2174 aa1.74□□□□□ -2.13
UBBP3-201ENST00000445497 MGAMO43451 1857 aa1.74□□□□□ -2.13
UBBP3-201ENST00000445497 CPAMD8Q8IZJ3 1885 aa1.74□□□□□ -2.13
UBBP3-201ENST00000445497 A0A0J9YWU9 116 aa1.74□□□□□ -2.13
UBBP3-201ENST00000445497 TRBV6-1A0A0K0K1D8 114 aa1.74□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 155.6 ms