RNA–Protein interactions for RNA: ENST00000444878.5

RBM39-216, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 2,124 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-216ENST00000444878 HSD52Q0P140 79 aa9.9□□□□□ -0.82
RBM39-216ENST00000444878 C5orf47Q569G3 176 aa9.9□□□□□ -0.82
RBM39-216ENST00000444878 Q6ZVH6 145 aa9.9□□□□□ -0.82
RBM39-216ENST00000444878 RS1O15537 224 aa9.89□□□□□ -0.83
RBM39-216ENST00000444878 RPL35AP18077 110 aaKnown RBP9.89□□□□□ -0.83
RBM39-216ENST00000444878 Q6ZSN1 163 aa9.89□□□□□ -0.83
RBM39-216ENST00000444878 C20orf203Q8NBC4 194 aa9.89□□□□□ -0.83
RBM39-216ENST00000444878 COX11Q9Y6N1 276 aa9.89□□□□□ -0.83
RBM39-216ENST00000444878 TRAV26-1A0A087WT03 109 aa9.89□□□□□ -0.83
RBM39-216ENST00000444878 TRGV1A0A0A0MS02 117 aa9.89□□□□□ -0.83
RBM39-216ENST00000444878 IGHV3-53P01767 116 aa9.89□□□□□ -0.83
RBM39-216ENST00000444878 SEC11AP67812 179 aa9.89□□□□□ -0.83
RBM39-216ENST00000444878 TMEM263Q8WUH6 116 aaKnown RBP9.89□□□□□ -0.83
RBM39-216ENST00000444878 CST9LQ9H4G1 147 aa9.89□□□□□ -0.83
RBM39-216ENST00000444878 GIG44P09565 113 aaPredicted RBP9.88□□□□□ -0.83
RBM39-216ENST00000444878 PAPPA-AS1Q5QFB9 102 aa9.88□□□□□ -0.83
RBM39-216ENST00000444878 LINC00482Q8N8I6 264 aa9.88□□□□□ -0.83
RBM39-216ENST00000444878 HIGD1BQ9P298 99 aa9.88□□□□□ -0.83
RBM39-216ENST00000444878 TRBV25-1A0A075B6N4 114 aa9.88□□□□□ -0.83
RBM39-216ENST00000444878 OR11H2Q8NH07 326 aa9.88□□□□□ -0.83
RBM39-216ENST00000444878 IL17DQ8TAD2 202 aa9.88□□□□□ -0.83
RBM39-216ENST00000444878 ORAOV1Q8WV07 137 aa9.88□□□□□ -0.83
RBM39-216ENST00000444878 C1QTNF4Q9BXJ3 329 aa9.88□□□□□ -0.83
RBM39-216ENST00000444878 Q9UF83 564 aa9.88□□□□□ -0.83
RBM39-216ENST00000444878 IGLV4-69A0A075B6H9 119 aa9.87□□□□□ -0.83
RBM39-216ENST00000444878 EMP1P54849 157 aa9.87□□□□□ -0.83
RBM39-216ENST00000444878 OR4C5Q8NGB2 326 aa9.87□□□□□ -0.83
RBM39-216ENST00000444878 C11orf86A6NJI1 115 aa9.86□□□□□ -0.83
RBM39-216ENST00000444878 TAX1BP3O14907 124 aa9.86□□□□□ -0.83
RBM39-216ENST00000444878 NPSP0C0P6 89 aa9.86□□□□□ -0.83
RBM39-216ENST00000444878 MAPKAPK5-AS1Q8N8E1 139 aa9.86□□□□□ -0.83
RBM39-216ENST00000444878 DNAJC30Q96LL9 226 aa9.86□□□□□ -0.83
RBM39-216ENST00000444878 E9PLD3 99 aa9.86□□□□□ -0.83
RBM39-216ENST00000444878 MRPL23Q16540 153 aaKnown RBP9.86□□□□□ -0.83
RBM39-216ENST00000444878 OPRPNQ99935 248 aaPredicted RBP9.86□□□□□ -0.83
RBM39-216ENST00000444878 CHAC1Q9BUX1 264 aa9.86□□□□□ -0.83
RBM39-216ENST00000444878 M0QXV9 152 aa9.85□□□□□ -0.83
RBM39-216ENST00000444878 Q6ZTI0 123 aa9.85□□□□□ -0.83
RBM39-216ENST00000444878 A6NDN8 102 aa9.85□□□□□ -0.83
RBM39-216ENST00000444878 C16orf74Q96GX8 76 aa9.85□□□□□ -0.83
RBM39-216ENST00000444878 PRADC1Q9BSG0 188 aa9.85□□□□□ -0.83
RBM39-216ENST00000444878 CRLF1O75462 422 aa9.84□□□□□ -0.83
RBM39-216ENST00000444878 HERVK_113P61574 105 aa9.84□□□□□ -0.83
RBM39-216ENST00000444878 NOP10Q9NPE3 64 aaKnown RBP9.84□□□□□ -0.83
RBM39-216ENST00000444878 CSNK1G2-AS1Q8NCQ2 148 aa9.83□□□□□ -0.84
RBM39-216ENST00000444878 VWFP04275 2813 aa9.83□□□□□ -0.84
RBM39-216ENST00000444878 IGLV4-3A0A075B6K6 122 aa9.83□□□□□ -0.84
RBM39-216ENST00000444878 MYMXA0A1B0GTQ4 84 aa9.83□□□□□ -0.84
RBM39-216ENST00000444878 K7EP13 123 aa9.83□□□□□ -0.84
RBM39-216ENST00000444878 GCSHP23434 173 aa9.83□□□□□ -0.84
RBM39-216ENST00000444878 DAZ2Q13117 558 aaKnown RBP9.83□□□□□ -0.84
RBM39-216ENST00000444878 RRN3P1Q2M238 152 aa9.83□□□□□ -0.84
RBM39-216ENST00000444878 TMEM170BQ5T4T1 132 aa9.83□□□□□ -0.84
RBM39-216ENST00000444878 PHLDA1Q8WV24 401 aaPredicted RBP9.83□□□□□ -0.84
RBM39-216ENST00000444878 PYGO1Q9Y3Y4 419 aa9.83□□□□□ -0.84
RBM39-216ENST00000444878 TRAV4A0A0B4J268 109 aa9.82□□□□□ -0.84
RBM39-216ENST00000444878 IGHV3-38A0A0C4DH36 116 aa9.82□□□□□ -0.84
RBM39-216ENST00000444878 ZNRF2Q8NHG8 242 aa9.82□□□□□ -0.84
RBM39-216ENST00000444878 INSL3P51460 131 aa9.82□□□□□ -0.84
RBM39-216ENST00000444878 ATRQ13535 2644 aa9.82□□□□□ -0.84
RBM39-216ENST00000444878 VAMP3Q15836 100 aa9.81□□□□□ -0.84
RBM39-216ENST00000444878 NFE4Q86UQ8 179 aa9.81□□□□□ -0.84
RBM39-216ENST00000444878 CHCHD7Q9BUK0 85 aa9.81□□□□□ -0.84
RBM39-216ENST00000444878 TENM1Q9UKZ4 2725 aa9.81□□□□□ -0.84
RBM39-216ENST00000444878 PLAC8L1A1L4L8 177 aa9.8□□□□□ -0.84
RBM39-216ENST00000444878 C9orf66Q5T8R8 295 aa9.8□□□□□ -0.84
RBM39-216ENST00000444878 TEP1Q99973 2627 aaKnown RBP9.8□□□□□ -0.84
RBM39-216ENST00000444878 TRBV7-3A0A075B6L6 115 aa9.8□□□□□ -0.84
RBM39-216ENST00000444878 TRBV10-1A0A0K0K1A3 114 aa9.8□□□□□ -0.84
RBM39-216ENST00000444878 ZNF815PA8K554 130 aa9.8□□□□□ -0.84
RBM39-216ENST00000444878 K7EQD1 137 aa9.8□□□□□ -0.84
RBM39-216ENST00000444878 CEND1Q8N111 149 aa9.8□□□□□ -0.84
RBM39-216ENST00000444878 TRGV2A0A075B6R0 118 aa9.79□□□□□ -0.84
RBM39-216ENST00000444878 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.79□□□□□ -0.84
RBM39-216ENST00000444878 IGKV2-29A2NJV5 120 aaPredicted RBP9.79□□□□□ -0.84
RBM39-216ENST00000444878 H3BRM9 83 aa9.79□□□□□ -0.84
RBM39-216ENST00000444878 PTTG1IPP53801 180 aa9.79□□□□□ -0.84
RBM39-216ENST00000444878 FXYD2P54710 66 aa9.79□□□□□ -0.84
RBM39-216ENST00000444878 RPL36AP83881 106 aaKnown RBP9.79□□□□□ -0.84
RBM39-216ENST00000444878 TAL2Q16559 108 aa9.79□□□□□ -0.84
RBM39-216ENST00000444878 CEMP1Q6PRD7 247 aaPredicted RBP9.79□□□□□ -0.84
RBM39-216ENST00000444878 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.79□□□□□ -0.84
RBM39-216ENST00000444878 RPL36ALQ969Q0 106 aaKnown RBP9.79□□□□□ -0.84
RBM39-216ENST00000444878 CSDC2Q9Y534 153 aaKnown RBP9.79□□□□□ -0.84
RBM39-216ENST00000444878 F8P00451 2351 aa9.79□□□□□ -0.84
RBM39-216ENST00000444878 GAGE12BA1L429 117 aa9.79□□□□□ -0.84
RBM39-216ENST00000444878 GAGE7O76087 117 aa9.79□□□□□ -0.84
RBM39-216ENST00000444878 GAGE12FP0CL80 117 aa9.79□□□□□ -0.84
RBM39-216ENST00000444878 GAGE12GP0CL81 117 aa9.79□□□□□ -0.84
RBM39-216ENST00000444878 GAGE12IP0CL82 117 aa9.79□□□□□ -0.84
RBM39-216ENST00000444878 CRYBA4P53673 196 aa9.79□□□□□ -0.84
RBM39-216ENST00000444878 UBE2V1Q13404 147 aa9.79□□□□□ -0.84
RBM39-216ENST00000444878 AMELXQ99217 191 aa9.79□□□□□ -0.84
RBM39-216ENST00000444878 HIST1H4GQ99525 98 aa9.79□□□□□ -0.84
RBM39-216ENST00000444878 TM2D2Q9BX73 214 aa9.79□□□□□ -0.84
RBM39-216ENST00000444878 SPANXA1Q9NS26 97 aa9.79□□□□□ -0.84
RBM39-216ENST00000444878 UBE2D4Q9Y2X8 147 aa9.79□□□□□ -0.84
RBM39-216ENST00000444878 A0A0J9YXV3 536 aa9.78□□□□□ -0.84
RBM39-216ENST00000444878 SCGB1D4Q6XE38 83 aa9.78□□□□□ -0.84
RBM39-216ENST00000444878 SLC25A29Q8N8R3 303 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 90.3 ms