RNA–Protein interactions for RNA: ENST00000444532.2

CCDC188-202, Transcript of coiled-coil domain containing 188, humanhuman

TSL 3

Gene CCDC188, Length 628 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188-202ENST00000444532 PRR34Q9NV39 138 aa12.31□□□□□ -0.44
CCDC188-202ENST00000444532 NAT8BQ9UHF3 227 aa12.31□□□□□ -0.44
CCDC188-202ENST00000444532 A0A1B0GUV1 79 aa12.3□□□□□ -0.44
CCDC188-202ENST00000444532 LINC00862A6NCI5 91 aa12.3□□□□□ -0.44
CCDC188-202ENST00000444532 LECT2O14960 151 aa12.3□□□□□ -0.44
CCDC188-202ENST00000444532 AMTP48728 403 aa12.3□□□□□ -0.44
CCDC188-202ENST00000444532 UQCC3Q6UW78 93 aa12.3□□□□□ -0.44
CCDC188-202ENST00000444532 COMMD7Q86VX2 200 aa12.3□□□□□ -0.44
CCDC188-202ENST00000444532 NCR2O95944 276 aa12.29□□□□□ -0.44
CCDC188-202ENST00000444532 LINC00269Q8N2A0 174 aa12.29□□□□□ -0.44
CCDC188-202ENST00000444532 DNAH5Q8TE73 4624 aa12.28□□□□□ -0.44
CCDC188-202ENST00000444532 TRBV6-5A0A0K0K1A5 114 aa12.28□□□□□ -0.44
CCDC188-202ENST00000444532 UBE2L6O14933 153 aa12.28□□□□□ -0.44
CCDC188-202ENST00000444532 DEFB104AQ8WTQ1 72 aa12.28□□□□□ -0.44
CCDC188-202ENST00000444532 HSPG2P98160 4391 aa12.28□□□□□ -0.44
CCDC188-202ENST00000444532 SMIM27A0A1W2PRY6 76 aa12.27□□□□□ -0.45
CCDC188-202ENST00000444532 TMEM218A2RU14 115 aa12.27□□□□□ -0.45
CCDC188-202ENST00000444532 SDHAF1A6NFY7 115 aa12.27□□□□□ -0.45
CCDC188-202ENST00000444532 RAB4AP20338 218 aa12.27□□□□□ -0.45
CCDC188-202ENST00000444532 Q8N1X5 172 aa12.27□□□□□ -0.45
CCDC188-202ENST00000444532 MRAP2Q96G30 205 aa12.27□□□□□ -0.45
CCDC188-202ENST00000444532 RNF185Q96GF1 192 aa12.27□□□□□ -0.45
CCDC188-202ENST00000444532 RYR1P21817 5038 aa12.26□□□□□ -0.45
CCDC188-202ENST00000444532 XGP55808 180 aa12.26□□□□□ -0.45
CCDC188-202ENST00000444532 C20orf203Q8NBC4 194 aa12.26□□□□□ -0.45
CCDC188-202ENST00000444532 I3L3M4 83 aa12.25□□□□□ -0.45
CCDC188-202ENST00000444532 ADCYAP1P18509 176 aa12.25□□□□□ -0.45
CCDC188-202ENST00000444532 REG3AQ06141 175 aa12.25□□□□□ -0.45
CCDC188-202ENST00000444532 C14orf177Q52M58 125 aa12.25□□□□□ -0.45
CCDC188-202ENST00000444532 AMN1Q8IY45 258 aa12.25□□□□□ -0.45
CCDC188-202ENST00000444532 TMEM70Q9BUB7 260 aa12.25□□□□□ -0.45
CCDC188-202ENST00000444532 KRTAP17-1Q9BYP8 105 aa12.25□□□□□ -0.45
CCDC188-202ENST00000444532 ST20Q9HBF5 79 aa12.25□□□□□ -0.45
CCDC188-202ENST00000444532 IGLV4-60A0A075B6I1 120 aa12.24□□□□□ -0.45
CCDC188-202ENST00000444532 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.24□□□□□ -0.45
CCDC188-202ENST00000444532 A0A1B0GW15 77 aa12.24□□□□□ -0.45
CCDC188-202ENST00000444532 H7C423 109 aa12.24□□□□□ -0.45
CCDC188-202ENST00000444532 PMCHP20382 165 aa12.24□□□□□ -0.45
CCDC188-202ENST00000444532 CLPSL2Q6UWE3 100 aa12.24□□□□□ -0.45
CCDC188-202ENST00000444532 APOBP04114 4563 aaKnown RBP12.23□□□□□ -0.45
CCDC188-202ENST00000444532 TRAV8-4A0A0B4J246 113 aa12.23□□□□□ -0.45
CCDC188-202ENST00000444532 F8W036 122 aa12.23□□□□□ -0.45
CCDC188-202ENST00000444532 GAS8-AS1O95177 125 aa12.23□□□□□ -0.45
CCDC188-202ENST00000444532 PPP1R17O96001 155 aa12.23□□□□□ -0.45
CCDC188-202ENST00000444532 APCSP02743 223 aa12.23□□□□□ -0.45
CCDC188-202ENST00000444532 PNRC1Q12796 327 aaPredicted RBP12.23□□□□□ -0.45
CCDC188-202ENST00000444532 KRTAP4-5Q9BYR2 181 aa12.23□□□□□ -0.45
CCDC188-202ENST00000444532 KRTAP26-1Q6PEX3 210 aa12.22□□□□□ -0.45
CCDC188-202ENST00000444532 HLA-DQA1P01909 254 aa12.21□□□□□ -0.45
CCDC188-202ENST00000444532 POLR2KP53803 58 aaKnown RBP12.21□□□□□ -0.45
CCDC188-202ENST00000444532 SEC11CQ9BY50 192 aa12.21□□□□□ -0.45
CCDC188-202ENST00000444532 TRBV27A0A0K0K1C4 114 aa12.2□□□□□ -0.46
CCDC188-202ENST00000444532 PPP1R2P9O14990 202 aa12.2□□□□□ -0.46
CCDC188-202ENST00000444532 RPS10P46783 165 aaKnown RBP12.2□□□□□ -0.46
CCDC188-202ENST00000444532 FAM104BQ5XKR9 115 aa12.2□□□□□ -0.46
CCDC188-202ENST00000444532 AMMECR1LQ6DCA0 310 aa12.2□□□□□ -0.46
CCDC188-202ENST00000444532 USP17L23D6RBM5 183 aa12.19□□□□□ -0.46
CCDC188-202ENST00000444532 TSHBP01222 138 aa12.19□□□□□ -0.46
CCDC188-202ENST00000444532 S100A8P05109 93 aa12.19□□□□□ -0.46
CCDC188-202ENST00000444532 CAMPP49913 170 aa12.19□□□□□ -0.46
CCDC188-202ENST00000444532 IGLV10-54A0A075B6I4 117 aa12.18□□□□□ -0.46
CCDC188-202ENST00000444532 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.18□□□□□ -0.46
CCDC188-202ENST00000444532 IGKV2-29A2NJV5 120 aaPredicted RBP12.18□□□□□ -0.46
CCDC188-202ENST00000444532 VCYO14598 125 aa12.18□□□□□ -0.46
CCDC188-202ENST00000444532 ESDP10768 282 aa12.18□□□□□ -0.46
CCDC188-202ENST00000444532 MRPL51Q4U2R6 128 aaKnown RBP12.18□□□□□ -0.46
CCDC188-202ENST00000444532 C10orf91Q5T1B1 145 aa12.18□□□□□ -0.46
CCDC188-202ENST00000444532 SMKR1H3BMG3 65 aa12.17□□□□□ -0.46
CCDC188-202ENST00000444532 MT-ND4LP03901 98 aa12.17□□□□□ -0.46
CCDC188-202ENST00000444532 FGF6P10767 208 aa12.17□□□□□ -0.46
CCDC188-202ENST00000444532 ZNF25P17030 456 aaPredicted RBP12.17□□□□□ -0.46
CCDC188-202ENST00000444532 HBBP68871 147 aa12.17□□□□□ -0.46
CCDC188-202ENST00000444532 RNASEKQ6P5S7 137 aaKnown RBP12.17□□□□□ -0.46
CCDC188-202ENST00000444532 NRACQ8N912 160 aa12.17□□□□□ -0.46
CCDC188-202ENST00000444532 ANAPC16Q96DE5 110 aa12.17□□□□□ -0.46
CCDC188-202ENST00000444532 TMEM242Q9NWH2 141 aa12.17□□□□□ -0.46
CCDC188-202ENST00000444532 SUMO2P61956 95 aaKnown RBP12.16□□□□□ -0.46
CCDC188-202ENST00000444532 MRPL54Q6P161 138 aaKnown RBP12.16□□□□□ -0.46
CCDC188-202ENST00000444532 Q6ZSA8 131 aa12.16□□□□□ -0.46
CCDC188-202ENST00000444532 FAM30AQ9NZY2 134 aa12.16□□□□□ -0.46
CCDC188-202ENST00000444532 PCLOQ9Y6V0 5065 aa12.15□□□□□ -0.46
CCDC188-202ENST00000444532 A0A1B0GXF2 115 aa12.15□□□□□ -0.46
CCDC188-202ENST00000444532 CLRN3Q8NCR9 226 aa12.15□□□□□ -0.46
CCDC188-202ENST00000444532 TMEM101Q96IK0 257 aa12.15□□□□□ -0.46
CCDC188-202ENST00000444532 BTF3L4Q96K17 158 aa12.15□□□□□ -0.46
CCDC188-202ENST00000444532 TRBV24-1A0A075B6N3 115 aa12.14□□□□□ -0.47
CCDC188-202ENST00000444532 EPM2AB3EWF7 344 aa12.14□□□□□ -0.47
CCDC188-202ENST00000444532 PRSS1P07477 247 aa12.14□□□□□ -0.47
CCDC188-202ENST00000444532 CKS2P33552 79 aa12.14□□□□□ -0.47
CCDC188-202ENST00000444532 DGAT2L7PQ6IED9 249 aa12.14□□□□□ -0.47
CCDC188-202ENST00000444532 ATP5L2Q7Z4Y8 100 aa12.14□□□□□ -0.47
CCDC188-202ENST00000444532 KIR2DL4Q99706 377 aa12.14□□□□□ -0.47
CCDC188-202ENST00000444532 C20orf78Q9BR46 151 aa12.14□□□□□ -0.47
CCDC188-202ENST00000444532 C7orf77A4D0Y5 90 aa12.13□□□□□ -0.47
CCDC188-202ENST00000444532 FCER1GP30273 86 aa12.13□□□□□ -0.47
CCDC188-202ENST00000444532 LINC01620Q4KN68 170 aa12.13□□□□□ -0.47
CCDC188-202ENST00000444532 MRPL52Q86TS9 123 aaKnown RBP12.13□□□□□ -0.47
CCDC188-202ENST00000444532 CARHSP1Q9Y2V2 147 aaKnown RBP12.13□□□□□ -0.47
CCDC188-202ENST00000444532 RPL32P62910 135 aaKnown RBP12.12□□□□□ -0.47
CCDC188-202ENST00000444532 HAMPP81172 84 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms