RNA–Protein interactions for RNA: ENST00000444502.5

TOP3B-210, Transcript of DNA topoisomerase III beta, humanhuman

TSL 2

Gene TOP3B, Length 4,163 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-210ENST00000444502 RS1O15537 224 aa8□□□□□ -1.13
TOP3B-210ENST00000444502 SMIM2Q9BVW6 85 aa8□□□□□ -1.13
TOP3B-210ENST00000444502 HIGD1BQ9P298 99 aa8□□□□□ -1.13
TOP3B-210ENST00000444502 DEFB135Q30KP9 77 aa7.99□□□□□ -1.13
TOP3B-210ENST00000444502 C2orf82Q6UX34 121 aa7.99□□□□□ -1.13
TOP3B-210ENST00000444502 FAM236AA0A1B0GUQ0 79 aa7.99□□□□□ -1.13
TOP3B-210ENST00000444502 FAM236BA0A1B0GV22 79 aa7.99□□□□□ -1.13
TOP3B-210ENST00000444502 BRI3O95415 125 aa7.99□□□□□ -1.13
TOP3B-210ENST00000444502 MALP21145 153 aa7.99□□□□□ -1.13
TOP3B-210ENST00000444502 CFAP126Q5VTH2 177 aa7.99□□□□□ -1.13
TOP3B-210ENST00000444502 LINC01006Q8NI28 216 aa7.99□□□□□ -1.13
TOP3B-210ENST00000444502 SDHAF1A6NFY7 115 aa7.99□□□□□ -1.13
TOP3B-210ENST00000444502 MRPS12O15235 138 aaKnown RBP7.99□□□□□ -1.13
TOP3B-210ENST00000444502 TCL1BO95988 128 aa7.99□□□□□ -1.13
TOP3B-210ENST00000444502 CRPP02741 224 aa7.99□□□□□ -1.13
TOP3B-210ENST00000444502 LINC00694P0DN24 101 aa7.99□□□□□ -1.13
TOP3B-210ENST00000444502 TRPT1Q86TN4 253 aaKnown RBP7.99□□□□□ -1.13
TOP3B-210ENST00000444502 U3KQE9 123 aa7.99□□□□□ -1.13
TOP3B-210ENST00000444502 CRLF1O75462 422 aa7.98□□□□□ -1.13
TOP3B-210ENST00000444502 APOC4P55056 127 aa7.98□□□□□ -1.13
TOP3B-210ENST00000444502 C9orf66Q5T8R8 295 aa7.98□□□□□ -1.13
TOP3B-210ENST00000444502 C20orf173Q96LM9 149 aa7.98□□□□□ -1.13
TOP3B-210ENST00000444502 COL12A1Q99715 3063 aa7.98□□□□□ -1.13
TOP3B-210ENST00000444502 CIRBPQ14011 172 aaKnown RBP7.98□□□□□ -1.13
TOP3B-210ENST00000444502 C9orf47Q6ZRZ4 202 aa7.98□□□□□ -1.13
TOP3B-210ENST00000444502 MRPL53Q96EL3 112 aaKnown RBP7.98□□□□□ -1.13
TOP3B-210ENST00000444502 DCHS1Q96JQ0 3298 aa7.98□□□□□ -1.13
TOP3B-210ENST00000444502 GAS8-AS1O95177 125 aa7.98□□□□□ -1.13
TOP3B-210ENST00000444502 ATP6V0E2Q8NHE4 81 aa7.98□□□□□ -1.13
TOP3B-210ENST00000444502 C4orf3Q8WVX3 66 aa7.98□□□□□ -1.13
TOP3B-210ENST00000444502 RHODO00212 210 aa7.97□□□□□ -1.13
TOP3B-210ENST00000444502 JPT2Q9H910 190 aa7.97□□□□□ -1.13
TOP3B-210ENST00000444502 TP53TG1Q9Y2A0 90 aa7.97□□□□□ -1.13
TOP3B-210ENST00000444502 GAGE2AQ6NT46 116 aa7.97□□□□□ -1.13
TOP3B-210ENST00000444502 IGLC6P0CF74 106 aa7.97□□□□□ -1.13
TOP3B-210ENST00000444502 TMEM86BQ8N661 226 aa7.97□□□□□ -1.13
TOP3B-210ENST00000444502 C11orf21Q9P2W6 132 aa7.97□□□□□ -1.13
TOP3B-210ENST00000444502 RNASE1P07998 156 aaKnown RBP7.96□□□□□ -1.13
TOP3B-210ENST00000444502 RNASE13Q5GAN3 156 aaKnown RBP7.96□□□□□ -1.13
TOP3B-210ENST00000444502 ZNF493Q6ZR52 646 aa7.96□□□□□ -1.13
TOP3B-210ENST00000444502 K7EMT4 169 aa7.96□□□□□ -1.13
TOP3B-210ENST00000444502 KALRNO60229 2985 aa7.96□□□□□ -1.13
TOP3B-210ENST00000444502 NPC2P61916 151 aa7.96□□□□□ -1.13
TOP3B-210ENST00000444502 FHL3Q13643 280 aa7.96□□□□□ -1.13
TOP3B-210ENST00000444502 C1orf43Q9BWL3 253 aa7.96□□□□□ -1.13
TOP3B-210ENST00000444502 H3BMM0 161 aa7.96□□□□□ -1.14
TOP3B-210ENST00000444502 TAL2Q16559 108 aa7.96□□□□□ -1.14
TOP3B-210ENST00000444502 UBE2WQ96B02 151 aa7.96□□□□□ -1.14
TOP3B-210ENST00000444502 CARD19Q96LW7 228 aa7.96□□□□□ -1.14
TOP3B-210ENST00000444502 TMEM126AQ9H061 195 aa7.96□□□□□ -1.14
TOP3B-210ENST00000444502 ZNF702PQ9H963 129 aa7.96□□□□□ -1.14
TOP3B-210ENST00000444502 LENEPQ9Y5L5 61 aa7.96□□□□□ -1.14
TOP3B-210ENST00000444502 ASPMQ8IZT6 3477 aa7.96□□□□□ -1.14
TOP3B-210ENST00000444502 COX6CP09669 75 aa7.96□□□□□ -1.14
TOP3B-210ENST00000444502 Q8N1Y9 231 aa7.96□□□□□ -1.14
TOP3B-210ENST00000444502 CSDC2Q9Y534 153 aaKnown RBP7.96□□□□□ -1.14
TOP3B-210ENST00000444502 KLK5Q9Y337 293 aaPredicted RBP7.95□□□□□ -1.14
TOP3B-210ENST00000444502 TEX49A0A1B0GTD5 131 aa7.95□□□□□ -1.14
TOP3B-210ENST00000444502 PLNP26678 52 aa7.95□□□□□ -1.14
TOP3B-210ENST00000444502 CLPSL2Q6UWE3 100 aa7.95□□□□□ -1.14
TOP3B-210ENST00000444502 ZNF625Q96I27 306 aaPredicted RBP7.95□□□□□ -1.14
TOP3B-210ENST00000444502 TACC2O95359 2948 aa7.95□□□□□ -1.14
TOP3B-210ENST00000444502 SMIM9A6NGZ8 99 aa7.94□□□□□ -1.14
TOP3B-210ENST00000444502 J3KT08 172 aa7.94□□□□□ -1.14
TOP3B-210ENST00000444502 EDN2P20800 178 aa7.94□□□□□ -1.14
TOP3B-210ENST00000444502 A4D1N5 150 aa7.94□□□□□ -1.14
TOP3B-210ENST00000444502 SMCPP49901 116 aaPredicted RBP7.94□□□□□ -1.14
TOP3B-210ENST00000444502 PRR9Q5T870 116 aa7.94□□□□□ -1.14
TOP3B-210ENST00000444502 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP7.94□□□□□ -1.14
TOP3B-210ENST00000444502 LINC00482Q8N8I6 264 aa7.94□□□□□ -1.14
TOP3B-210ENST00000444502 A0A096LNJ9 63 aa7.93□□□□□ -1.14
TOP3B-210ENST00000444502 TRAV8-3A0A0A6YYJ7 113 aa7.93□□□□□ -1.14
TOP3B-210ENST00000444502 PSMB8P28062 276 aa7.93□□□□□ -1.14
TOP3B-210ENST00000444502 PSMG3-AS1Q96PY0 264 aa7.93□□□□□ -1.14
TOP3B-210ENST00000444502 WFDC10AQ9H1F0 79 aa7.93□□□□□ -1.14
TOP3B-210ENST00000444502 PRO1854Q9UHT4 67 aa7.93□□□□□ -1.14
TOP3B-210ENST00000444502 TMEM89A2RUT3 159 aa7.93□□□□□ -1.14
TOP3B-210ENST00000444502 MDFICQ9P1T7 246 aa7.93□□□□□ -1.14
TOP3B-210ENST00000444502 GCN1Q92616 2671 aaKnown RBP7.93□□□□□ -1.14
TOP3B-210ENST00000444502 F8VRH5 84 aa7.92□□□□□ -1.14
TOP3B-210ENST00000444502 PRO0461Q9UI25 63 aa7.92□□□□□ -1.14
TOP3B-210ENST00000444502 LRBAP50851 2863 aa7.92□□□□□ -1.14
TOP3B-210ENST00000444502 A0A0J9YX75 114 aa7.92□□□□□ -1.14
TOP3B-210ENST00000444502 M0R2P5 195 aa7.92□□□□□ -1.14
TOP3B-210ENST00000444502 PAX4O43316 350 aa7.92□□□□□ -1.14
TOP3B-210ENST00000444502 PRB2P02812 416 aaPredicted RBP7.92□□□□□ -1.14
TOP3B-210ENST00000444502 HILS1P60008 231 aa7.92□□□□□ -1.14
TOP3B-210ENST00000444502 HERVK_113P63121 156 aa7.92□□□□□ -1.14
TOP3B-210ENST00000444502 ATXN8Q156A1 80 aa7.92□□□□□ -1.14
TOP3B-210ENST00000444502 MAP6D1Q9H9H5 199 aa7.92□□□□□ -1.14
TOP3B-210ENST00000444502 STAB1Q9NY15 2570 aa7.92□□□□□ -1.14
TOP3B-210ENST00000444502 ZFHX4Q86UP3 3567 aa7.92□□□□□ -1.14
TOP3B-210ENST00000444502 NHLRC4P0CG21 123 aaPredicted RBP7.92□□□□□ -1.14
TOP3B-210ENST00000444502 ZFAND2AQ8N6M9 145 aa7.92□□□□□ -1.14
TOP3B-210ENST00000444502 RNF185Q96GF1 192 aa7.92□□□□□ -1.14
TOP3B-210ENST00000444502 SPANXA1Q9NS26 97 aa7.92□□□□□ -1.14
TOP3B-210ENST00000444502 DEFB114Q30KQ6 69 aa7.91□□□□□ -1.14
TOP3B-210ENST00000444502 MORN3Q6PF18 240 aaPredicted RBP7.91□□□□□ -1.14
TOP3B-210ENST00000444502 FAM19A5Q7Z5A7 132 aaPredicted RBP7.91□□□□□ -1.14
TOP3B-210ENST00000444502 GATD1Q8NB37 220 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 112.1 ms