RNA–Protein interactions for RNA: ENST00000444061.7

SMARCA4-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 4,938 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-204ENST00000444061 GTSF1Q8WW33 167 aa10.48□□□□□ -0.73
SMARCA4-204ENST00000444061 ODF3L2Q3SX64 289 aa10.48□□□□□ -0.73
SMARCA4-204ENST00000444061 TRAV26-1A0A087WT03 109 aa10.48□□□□□ -0.73
SMARCA4-204ENST00000444061 TRIOO75962 3097 aa10.48□□□□□ -0.73
SMARCA4-204ENST00000444061 C19orf71A6NCJ1 209 aa10.47□□□□□ -0.73
SMARCA4-204ENST00000444061 EDN2P20800 178 aa10.47□□□□□ -0.73
SMARCA4-204ENST00000444061 K7EMI3 77 aa10.47□□□□□ -0.73
SMARCA4-204ENST00000444061 NUPR1O60356 82 aa10.47□□□□□ -0.73
SMARCA4-204ENST00000444061 FSHBP01225 129 aa10.47□□□□□ -0.73
SMARCA4-204ENST00000444061 IFITM1P13164 125 aa10.47□□□□□ -0.73
SMARCA4-204ENST00000444061 CENPEQ02224 2701 aa10.47□□□□□ -0.73
SMARCA4-204ENST00000444061 TRBV10-1A0A0K0K1A3 114 aa10.47□□□□□ -0.73
SMARCA4-204ENST00000444061 CDH23Q9H251 3354 aa10.47□□□□□ -0.73
SMARCA4-204ENST00000444061 F8VRH5 84 aa10.47□□□□□ -0.73
SMARCA4-204ENST00000444061 INAFM2P0DMQ5 153 aa10.47□□□□□ -0.73
SMARCA4-204ENST00000444061 RNASE13Q5GAN3 156 aaKnown RBP10.47□□□□□ -0.73
SMARCA4-204ENST00000444061 JPT2Q9H910 190 aa10.47□□□□□ -0.73
SMARCA4-204ENST00000444061 IGHV4-28A0A0C4DH34 117 aa10.46□□□□□ -0.73
SMARCA4-204ENST00000444061 XCL1P47992 114 aa10.46□□□□□ -0.73
SMARCA4-204ENST00000444061 LINC01545Q5VT33 79 aa10.46□□□□□ -0.73
SMARCA4-204ENST00000444061 SCRT2Q9NQ03 307 aa10.45□□□□□ -0.74
SMARCA4-204ENST00000444061 SLC25A20O43772 301 aa10.45□□□□□ -0.74
SMARCA4-204ENST00000444061 C12orf74Q32Q52 190 aa10.45□□□□□ -0.74
SMARCA4-204ENST00000444061 C9orf153Q5TBE3 101 aa10.45□□□□□ -0.74
SMARCA4-204ENST00000444061 VSIG2Q96IQ7 327 aa10.45□□□□□ -0.74
SMARCA4-204ENST00000444061 HERVK_113P63121 156 aa10.44□□□□□ -0.74
SMARCA4-204ENST00000444061 TDRG1Q3Y452 100 aa10.44□□□□□ -0.74
SMARCA4-204ENST00000444061 PRO1854Q9UHT4 67 aa10.44□□□□□ -0.74
SMARCA4-204ENST00000444061 H3BMG7 143 aa10.44□□□□□ -0.74
SMARCA4-204ENST00000444061 ZNF625Q96I27 306 aaPredicted RBP10.44□□□□□ -0.74
SMARCA4-204ENST00000444061 MGAQ8IWI9 3026 aa10.44□□□□□ -0.74
SMARCA4-204ENST00000444061 MLST8Q9BVC4 326 aa10.44□□□□□ -0.74
SMARCA4-204ENST00000444061 MRGPRG-AS1Q2M3A8 158 aa10.43□□□□□ -0.74
SMARCA4-204ENST00000444061 MRPL35Q9NZE8 188 aaKnown RBP10.43□□□□□ -0.74
SMARCA4-204ENST00000444061 TRAV10A0A0B4J240 114 aa10.43□□□□□ -0.74
SMARCA4-204ENST00000444061 FRMD6-AS1P0C7T7 363 aa10.43□□□□□ -0.74
SMARCA4-204ENST00000444061 LINC00322Q6ZN03 302 aaPredicted RBP10.43□□□□□ -0.74
SMARCA4-204ENST00000444061 TM2D2Q9BX73 214 aa10.43□□□□□ -0.74
SMARCA4-204ENST00000444061 HIGD1BQ9P298 99 aa10.43□□□□□ -0.74
SMARCA4-204ENST00000444061 TAX1BP3O14907 124 aa10.42□□□□□ -0.74
SMARCA4-204ENST00000444061 IGLV10-54A0A075B6I4 117 aa10.42□□□□□ -0.74
SMARCA4-204ENST00000444061 EDA2RQ9HAV5 297 aa10.42□□□□□ -0.74
SMARCA4-204ENST00000444061 TRAV8-3A0A0A6YYJ7 113 aa10.42□□□□□ -0.74
SMARCA4-204ENST00000444061 Q6ZVH6 145 aa10.42□□□□□ -0.74
SMARCA4-204ENST00000444061 A0A096LNT2 108 aa10.41□□□□□ -0.74
SMARCA4-204ENST00000444061 IGLV2-8P01709 118 aa10.41□□□□□ -0.74
SMARCA4-204ENST00000444061 COL27A1Q8IZC6 1860 aaPredicted RBP10.41□□□□□ -0.74
SMARCA4-204ENST00000444061 NPC2P61916 151 aa10.41□□□□□ -0.74
SMARCA4-204ENST00000444061 ZFP2Q6ZN57 461 aa10.41□□□□□ -0.74
SMARCA4-204ENST00000444061 LEPROTO15243 131 aa10.41□□□□□ -0.74
SMARCA4-204ENST00000444061 TNRC18O15417 2968 aaPredicted RBP10.41□□□□□ -0.74
SMARCA4-204ENST00000444061 RNF183Q96D59 192 aa10.41□□□□□ -0.74
SMARCA4-204ENST00000444061 KLK12Q9UKR0 248 aa10.41□□□□□ -0.74
SMARCA4-204ENST00000444061 PRSS29PA6NIE9 313 aa10.4□□□□□ -0.74
SMARCA4-204ENST00000444061 FGF6P10767 208 aa10.4□□□□□ -0.74
SMARCA4-204ENST00000444061 PFN2P35080 140 aa10.4□□□□□ -0.74
SMARCA4-204ENST00000444061 KLLNB2CW77 178 aa10.4□□□□□ -0.74
SMARCA4-204ENST00000444061 FLNAP21333 2647 aaKnown RBP10.4□□□□□ -0.75
SMARCA4-204ENST00000444061 C5orf38Q86SI9 138 aa10.39□□□□□ -0.75
SMARCA4-204ENST00000444061 YPEL4Q96NS1 127 aa10.39□□□□□ -0.75
SMARCA4-204ENST00000444061 IGLC6P0CF74 106 aa10.39□□□□□ -0.75
SMARCA4-204ENST00000444061 DKK2Q9UBU2 259 aa10.39□□□□□ -0.75
SMARCA4-204ENST00000444061 ITPR3Q14573 2671 aa10.39□□□□□ -0.75
SMARCA4-204ENST00000444061 G3V4G9 280 aa10.38□□□□□ -0.75
SMARCA4-204ENST00000444061 K7ERJ3 54 aa10.38□□□□□ -0.75
SMARCA4-204ENST00000444061 WDFY4Q6ZS81 3184 aa10.38□□□□□ -0.75
SMARCA4-204ENST00000444061 GATD1Q8NB37 220 aa10.38□□□□□ -0.75
SMARCA4-204ENST00000444061 HIST1H4AP62805 103 aaKnown RBP10.37□□□□□ -0.75
SMARCA4-204ENST00000444061 AKAP13Q12802 2813 aa10.37□□□□□ -0.75
SMARCA4-204ENST00000444061 DSPP15924 2871 aaKnown RBP10.37□□□□□ -0.75
SMARCA4-204ENST00000444061 A0A0J9YWU9 116 aa10.37□□□□□ -0.75
SMARCA4-204ENST00000444061 MRPS12O15235 138 aaKnown RBP10.37□□□□□ -0.75
SMARCA4-204ENST00000444061 NXPH4O95158 308 aa10.37□□□□□ -0.75
SMARCA4-204ENST00000444061 GAGE2AQ6NT46 116 aa10.37□□□□□ -0.75
SMARCA4-204ENST00000444061 SZT2Q5T011 3432 aa10.36□□□□□ -0.75
SMARCA4-204ENST00000444061 IGLV2-11P01706 119 aa10.36□□□□□ -0.75
SMARCA4-204ENST00000444061 CRIP1P50238 77 aa10.36□□□□□ -0.75
SMARCA4-204ENST00000444061 PCP2Q8IVA1 136 aa10.36□□□□□ -0.75
SMARCA4-204ENST00000444061 P0DMU3 169 aa10.36□□□□□ -0.75
SMARCA4-204ENST00000444061 FAM231AP0DMU4 169 aa10.36□□□□□ -0.75
SMARCA4-204ENST00000444061 FAM231CP0DMU5 169 aa10.36□□□□□ -0.75
SMARCA4-204ENST00000444061 NKAPP1Q8N9T2 125 aa10.36□□□□□ -0.75
SMARCA4-204ENST00000444061 NDUFA12Q9UI09 145 aa10.36□□□□□ -0.75
SMARCA4-204ENST00000444061 COX7A2LO14548 114 aa10.36□□□□□ -0.75
SMARCA4-204ENST00000444061 ACYP1P07311 99 aa10.36□□□□□ -0.75
SMARCA4-204ENST00000444061 PRR9Q5T870 116 aa10.36□□□□□ -0.75
SMARCA4-204ENST00000444061 PKIGQ9Y2B9 76 aa10.36□□□□□ -0.75
SMARCA4-204ENST00000444061 CFAP126Q5VTH2 177 aa10.35□□□□□ -0.75
SMARCA4-204ENST00000444061 ANKRD39Q53RE8 183 aa10.35□□□□□ -0.75
SMARCA4-204ENST00000444061 C15orf53Q8NAA6 179 aa10.35□□□□□ -0.75
SMARCA4-204ENST00000444061 RETNQ9HD89 108 aa10.35□□□□□ -0.75
SMARCA4-204ENST00000444061 DSCAML1Q8TD84 2053 aa10.35□□□□□ -0.75
SMARCA4-204ENST00000444061 SPATA12Q7Z6I5 190 aa10.35□□□□□ -0.75
SMARCA4-204ENST00000444061 TRBV6-4A0A1B0GX49 114 aa10.35□□□□□ -0.75
SMARCA4-204ENST00000444061 J3QQQ9 107 aa10.35□□□□□ -0.75
SMARCA4-204ENST00000444061 CAMK2N2Q96S95 79 aa10.34□□□□□ -0.75
SMARCA4-204ENST00000444061 SLC25A29Q8N8R3 303 aa10.34□□□□□ -0.75
SMARCA4-204ENST00000444061 PRM2P04554 102 aa10.34□□□□□ -0.75
SMARCA4-204ENST00000444061 RPL39P62891 51 aaKnown RBP10.34□□□□□ -0.75
SMARCA4-204ENST00000444061 KRTAP1-3Q8IUG1 177 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms