RNA–Protein interactions for RNA: ENST00000444058.1

ATPAF2-201, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

TSL 3

Gene ATPAF2, Length 685 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2-201ENST00000444058 TRAV26-2A0A0B4J265 109 aa12.34□□□□□ -0.43
ATPAF2-201ENST00000444058 HIGD1CA8MV81 97 aa12.34□□□□□ -0.43
ATPAF2-201ENST00000444058 SMDT1Q9H4I9 107 aa12.34□□□□□ -0.43
ATPAF2-201ENST00000444058 A0A1B0GUT8 65 aa12.33□□□□□ -0.44
ATPAF2-201ENST00000444058 REG3AQ06141 175 aa12.33□□□□□ -0.44
ATPAF2-201ENST00000444058 TMEM241Q24JQ0 296 aa12.33□□□□□ -0.44
ATPAF2-201ENST00000444058 FAM30AQ9NZY2 134 aa12.33□□□□□ -0.44
ATPAF2-201ENST00000444058 TRAV8-4A0A0B4J246 113 aa12.32□□□□□ -0.44
ATPAF2-201ENST00000444058 NCR2O95944 276 aa12.32□□□□□ -0.44
ATPAF2-201ENST00000444058 AMTP48728 403 aa12.32□□□□□ -0.44
ATPAF2-201ENST00000444058 C20orf203Q8NBC4 194 aa12.32□□□□□ -0.44
ATPAF2-201ENST00000444058 DNAH8Q96JB1 4490 aa12.32□□□□□ -0.44
ATPAF2-201ENST00000444058 UBE2L6O14933 153 aa12.31□□□□□ -0.44
ATPAF2-201ENST00000444058 Q5VSD8 79 aa12.31□□□□□ -0.44
ATPAF2-201ENST00000444058 KRTAP26-1Q6PEX3 210 aa12.31□□□□□ -0.44
ATPAF2-201ENST00000444058 ISOC2Q96AB3 205 aa12.31□□□□□ -0.44
ATPAF2-201ENST00000444058 TMEM191AQ9H0A3 160 aa12.31□□□□□ -0.44
ATPAF2-201ENST00000444058 V9GYV3 84 aa12.31□□□□□ -0.44
ATPAF2-201ENST00000444058 TRBV6-5A0A0K0K1A5 114 aa12.3□□□□□ -0.44
ATPAF2-201ENST00000444058 PEA15Q15121 130 aa12.3□□□□□ -0.44
ATPAF2-201ENST00000444058 RPL39LQ96EH5 51 aaKnown RBP12.3□□□□□ -0.44
ATPAF2-201ENST00000444058 IGLV4-60A0A075B6I1 120 aa12.29□□□□□ -0.44
ATPAF2-201ENST00000444058 SDHAF1A6NFY7 115 aa12.29□□□□□ -0.44
ATPAF2-201ENST00000444058 USP17L23D6RBM5 183 aa12.29□□□□□ -0.44
ATPAF2-201ENST00000444058 FAM229AH3BQW9 127 aa12.29□□□□□ -0.44
ATPAF2-201ENST00000444058 H7C423 109 aa12.29□□□□□ -0.44
ATPAF2-201ENST00000444058 HLA-DQA1P01909 254 aa12.29□□□□□ -0.44
ATPAF2-201ENST00000444058 RPL23P62829 140 aaKnown RBP12.29□□□□□ -0.44
ATPAF2-201ENST00000444058 CLPSL2Q6UWE3 100 aa12.29□□□□□ -0.44
ATPAF2-201ENST00000444058 NAT8Q9UHE5 227 aa12.29□□□□□ -0.44
ATPAF2-201ENST00000444058 C9JQL5 133 aa12.28□□□□□ -0.44
ATPAF2-201ENST00000444058 SMR3BP02814 79 aaPredicted RBP12.28□□□□□ -0.44
ATPAF2-201ENST00000444058 I3L3M4 83 aa12.27□□□□□ -0.45
ATPAF2-201ENST00000444058 HAMPP81172 84 aa12.27□□□□□ -0.45
ATPAF2-201ENST00000444058 DGAT2L7PQ6IED9 249 aa12.27□□□□□ -0.45
ATPAF2-201ENST00000444058 CLRN3Q8NCR9 226 aa12.27□□□□□ -0.45
ATPAF2-201ENST00000444058 NAT8BQ9UHF3 227 aa12.27□□□□□ -0.45
ATPAF2-201ENST00000444058 RIGQ13278 110 aa12.26□□□□□ -0.45
ATPAF2-201ENST00000444058 NUP35Q8NFH5 326 aa12.26□□□□□ -0.45
ATPAF2-201ENST00000444058 DEFB104AQ8WTQ1 72 aa12.26□□□□□ -0.45
ATPAF2-201ENST00000444058 MRAP2Q96G30 205 aa12.26□□□□□ -0.45
ATPAF2-201ENST00000444058 APCSP02743 223 aa12.25□□□□□ -0.45
ATPAF2-201ENST00000444058 PRSS1P07477 247 aa12.25□□□□□ -0.45
ATPAF2-201ENST00000444058 RAB4AP20338 218 aa12.25□□□□□ -0.45
ATPAF2-201ENST00000444058 SRSF3P84103 164 aaKnown RBP12.25□□□□□ -0.45
ATPAF2-201ENST00000444058 ADIRFQ15847 76 aa12.25□□□□□ -0.45
ATPAF2-201ENST00000444058 LINC01620Q4KN68 170 aa12.25□□□□□ -0.45
ATPAF2-201ENST00000444058 RNF185Q96GF1 192 aa12.25□□□□□ -0.45
ATPAF2-201ENST00000444058 ST20Q9HBF5 79 aa12.25□□□□□ -0.45
ATPAF2-201ENST00000444058 IGLV10-54A0A075B6I4 117 aa12.24□□□□□ -0.45
ATPAF2-201ENST00000444058 INAFM2P0DMQ5 153 aa12.24□□□□□ -0.45
ATPAF2-201ENST00000444058 SMIM27A0A1W2PRY6 76 aa12.23□□□□□ -0.45
ATPAF2-201ENST00000444058 PPP1R17O96001 155 aa12.23□□□□□ -0.45
ATPAF2-201ENST00000444058 PMCHP20382 165 aa12.23□□□□□ -0.45
ATPAF2-201ENST00000444058 AMMECR1LQ6DCA0 310 aa12.23□□□□□ -0.45
ATPAF2-201ENST00000444058 AMN1Q8IY45 258 aa12.23□□□□□ -0.45
ATPAF2-201ENST00000444058 CHAC1Q9BUX1 264 aa12.23□□□□□ -0.45
ATPAF2-201ENST00000444058 TRBV27A0A0K0K1C4 114 aa12.22□□□□□ -0.45
ATPAF2-201ENST00000444058 GAS8-AS1O95177 125 aa12.22□□□□□ -0.45
ATPAF2-201ENST00000444058 ZNF25P17030 456 aaPredicted RBP12.22□□□□□ -0.45
ATPAF2-201ENST00000444058 POLR2KP53803 58 aaKnown RBP12.22□□□□□ -0.45
ATPAF2-201ENST00000444058 A0A1B0GW15 77 aa12.21□□□□□ -0.45
ATPAF2-201ENST00000444058 FGF6P10767 208 aa12.21□□□□□ -0.45
ATPAF2-201ENST00000444058 ESDP10768 282 aa12.21□□□□□ -0.45
ATPAF2-201ENST00000444058 SCXQ7RTU7 201 aa12.21□□□□□ -0.45
ATPAF2-201ENST00000444058 C9orf163Q8N9P6 203 aa12.21□□□□□ -0.45
ATPAF2-201ENST00000444058 TSHBP01222 138 aa12.2□□□□□ -0.46
ATPAF2-201ENST00000444058 RPS10P46783 165 aaKnown RBP12.2□□□□□ -0.46
ATPAF2-201ENST00000444058 RNASEKQ6P5S7 137 aaKnown RBP12.2□□□□□ -0.46
ATPAF2-201ENST00000444058 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.19□□□□□ -0.46
ATPAF2-201ENST00000444058 IGKV2-29A2NJV5 120 aaPredicted RBP12.19□□□□□ -0.46
ATPAF2-201ENST00000444058 CNBPP62633 177 aaKnown RBP12.19□□□□□ -0.46
ATPAF2-201ENST00000444058 SRRM2Q9UQ35 2752 aaKnown RBP12.18□□□□□ -0.46
ATPAF2-201ENST00000444058 VCYO14598 125 aa12.18□□□□□ -0.46
ATPAF2-201ENST00000444058 PLA2G1BP04054 148 aaKnown RBP12.18□□□□□ -0.46
ATPAF2-201ENST00000444058 FAM104BQ5XKR9 115 aa12.18□□□□□ -0.46
ATPAF2-201ENST00000444058 BTF3L4Q96K17 158 aa12.18□□□□□ -0.46
ATPAF2-201ENST00000444058 VPS13BQ7Z7G8 4022 aa12.17□□□□□ -0.46
ATPAF2-201ENST00000444058 LINC00862A6NCI5 91 aa12.17□□□□□ -0.46
ATPAF2-201ENST00000444058 LINC00528Q8N1L1 170 aa12.17□□□□□ -0.46
ATPAF2-201ENST00000444058 CIRBP-AS1Q8TBR5 109 aa12.17□□□□□ -0.46
ATPAF2-201ENST00000444058 TMEM101Q96IK0 257 aa12.17□□□□□ -0.46
ATPAF2-201ENST00000444058 TMEM242Q9NWH2 141 aa12.17□□□□□ -0.46
ATPAF2-201ENST00000444058 hDV102S1A0JD36 115 aa12.16□□□□□ -0.46
ATPAF2-201ENST00000444058 SUMO2P61956 95 aaKnown RBP12.16□□□□□ -0.46
ATPAF2-201ENST00000444058 CFAP161Q6P656 301 aa12.16□□□□□ -0.46
ATPAF2-201ENST00000444058 MRPL52Q86TS9 123 aaKnown RBP12.16□□□□□ -0.46
ATPAF2-201ENST00000444058 NRACQ8N912 160 aa12.16□□□□□ -0.46
ATPAF2-201ENST00000444058 OR5A1Q8NGJ0 315 aa12.16□□□□□ -0.46
ATPAF2-201ENST00000444058 GAGE12HA6NDE8 117 aa12.15□□□□□ -0.46
ATPAF2-201ENST00000444058 PPP1R2P9O14990 202 aa12.15□□□□□ -0.46
ATPAF2-201ENST00000444058 S100A8P05109 93 aa12.15□□□□□ -0.46
ATPAF2-201ENST00000444058 CHCHD10Q8WYQ3 142 aaPredicted RBP12.15□□□□□ -0.46
ATPAF2-201ENST00000444058 AP5S1Q9NUS5 200 aa12.15□□□□□ -0.46
ATPAF2-201ENST00000444058 TRBV24-1A0A075B6N3 115 aa12.14□□□□□ -0.47
ATPAF2-201ENST00000444058 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.14□□□□□ -0.47
ATPAF2-201ENST00000444058 IGKV3OR2-268A0A0C4DH90 116 aa12.14□□□□□ -0.47
ATPAF2-201ENST00000444058 C7orf77A4D0Y5 90 aa12.14□□□□□ -0.47
ATPAF2-201ENST00000444058 CAMPP49913 170 aa12.14□□□□□ -0.47
ATPAF2-201ENST00000444058 RAB14P61106 215 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms